RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 TTPALQ9BTX7 342 aa19.53■□□□□ 0.72
TRAPPC9-211ENST00000521700 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.53■□□□□ 0.72
TRAPPC9-211ENST00000521700 SLC38A7Q9NVC3 462 aa19.53■□□□□ 0.72
TRAPPC9-211ENST00000521700 FNIP2Q9P278 1114 aa19.53■□□□□ 0.72
TRAPPC9-211ENST00000521700 PLXNA3P51805 1871 aa19.52■□□□□ 0.72
TRAPPC9-211ENST00000521700 HNRNPDLO14979 420 aaKnown RBP19.52■□□□□ 0.72
TRAPPC9-211ENST00000521700 CLTAP09496 248 aa19.52■□□□□ 0.72
TRAPPC9-211ENST00000521700 RPL17P18621 184 aaKnown RBP19.52■□□□□ 0.72
TRAPPC9-211ENST00000521700 ABCD1P33897 745 aa19.52■□□□□ 0.72
TRAPPC9-211ENST00000521700 AXDND1Q5T1B0 1012 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC9-211ENST00000521700 ATL3Q6DD88 541 aa19.52■□□□□ 0.72
TRAPPC9-211ENST00000521700 PRSS55Q6UWB4 352 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC9-211ENST00000521700 CEP57Q86XR8 500 aa19.52■□□□□ 0.72
TRAPPC9-211ENST00000521700 PALB2Q86YC2 1186 aa19.52■□□□□ 0.72
TRAPPC9-211ENST00000521700 MAP4K3Q8IVH8 894 aa19.52■□□□□ 0.72
TRAPPC9-211ENST00000521700 C18orf25Q96B23 403 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC9-211ENST00000521700 DDX27Q96GQ7 796 aaKnown RBP19.52■□□□□ 0.72
TRAPPC9-211ENST00000521700 A0A0B4J269 797 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 ANKRD63C9JTQ0 380 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 FAM189A1O60320 539 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 CXCL8P10145 99 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 GAP43P17677 238 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 TNFSF9P41273 254 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 DNM1Q05193 864 aaKnown RBP19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 ELAVL2Q12926 359 aaKnown RBP19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 E2F4Q16254 413 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 ZBTB41Q5SVQ8 909 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 TMC5Q6UXY8 1006 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 RNF135Q8IUD6 432 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 GLYCTKQ8IVS8 523 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 C3orf58Q8NDZ4 430 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 LNX1Q8TBB1 728 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 KCNG4Q8TDN1 519 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 PIK3R5Q8WYR1 880 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 STAMQ92783 540 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 NECTIN4Q96NY8 510 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 STRA6Q9BX79 667 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 C1QTNF1Q9BXJ1 281 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 POMKQ9H5K3 350 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 SFXN1Q9H9B4 322 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 PLEKHA5Q9HAU0 1116 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 MAN1C1Q9NR34 630 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 SEL1LQ9UBV2 794 aa19.51■□□□□ 0.71
TRAPPC9-211ENST00000521700 TTC26A0AVF1 554 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 OGTO15294 1046 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 PPP1R37O75864 691 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 GLUD1P00367 558 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 SPATA31D3P0C874 917 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 MYBP10242 640 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 FGFR3P22607 806 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 MTHFRP42898 656 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 BRCC3P46736 316 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 CREMQ03060 361 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 ATAT1Q5SQI0 421 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 LILRA6Q6PI73 481 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 SPATA31D4Q6ZUB0 917 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 RIPOR3Q96MK2 946 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 CLSTN3Q9BQT9 956 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 IKZF4Q9H2S9 585 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 MRPL44Q9H9J2 332 aaKnown RBP19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 TBC1D7Q9P0N9 293 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 CFAP45Q9UL16 551 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 PCDHA7Q9UN72 937 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 ZDHHC9Q9Y397 364 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 VWA8A3KMH1 1905 aa19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 PDCD11Q14690 1871 aaKnown RBP19.5■□□□□ 0.71
TRAPPC9-211ENST00000521700 FRMD3A2A2Y4 597 aa19.49■□□□□ 0.71
TRAPPC9-211ENST00000521700 SPDYE4A6NLX3 237 aa19.49■□□□□ 0.71
TRAPPC9-211ENST00000521700 TISP43B9A030 160 aa19.49■□□□□ 0.71
TRAPPC9-211ENST00000521700 I3L4J1 428 aa19.49■□□□□ 0.71
TRAPPC9-211ENST00000521700 PODXLO00592 558 aa19.49■□□□□ 0.71
TRAPPC9-211ENST00000521700 TGM5O43548 720 aa19.49■□□□□ 0.71
TRAPPC9-211ENST00000521700 C1RP00736 705 aa19.49■□□□□ 0.71
TRAPPC9-211ENST00000521700 ALADP13716 330 aa19.49■□□□□ 0.71
TRAPPC9-211ENST00000521700 IDEP14735 1019 aa19.49■□□□□ 0.71
TRAPPC9-211ENST00000521700 RPL9P32969 192 aaKnown RBP19.49■□□□□ 0.71
TRAPPC9-211ENST00000521700 SPAG1Q07617 926 aa19.49■□□□□ 0.71
TRAPPC9-211ENST00000521700 KYAT1Q16773 422 aa19.49■□□□□ 0.71
TRAPPC9-211ENST00000521700 HERC4Q5GLZ8 1057 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC9-211ENST00000521700 GPR149Q86SP6 731 aa19.49■□□□□ 0.71
TRAPPC9-211ENST00000521700 MSTO1Q9BUK6 570 aa19.49■□□□□ 0.71
TRAPPC9-211ENST00000521700 PANK4Q9NVE7 773 aa19.49■□□□□ 0.71
TRAPPC9-211ENST00000521700 KBTBD4Q9NVX7 518 aa19.49■□□□□ 0.71
TRAPPC9-211ENST00000521700 RCOR1Q9UKL0 485 aa19.49■□□□□ 0.71
TRAPPC9-211ENST00000521700 STYXL1Q9Y6J8 313 aa19.49■□□□□ 0.71
TRAPPC9-211ENST00000521700 MTCL1Q9Y4B5 1905 aaKnown RBP19.49■□□□□ 0.71
TRAPPC9-211ENST00000521700 LACTBL1A8MY62 500 aa19.48■□□□□ 0.71
TRAPPC9-211ENST00000521700 DCXO43602 365 aa19.48■□□□□ 0.71
TRAPPC9-211ENST00000521700 TRAPPC3O43617 180 aa19.48■□□□□ 0.71
TRAPPC9-211ENST00000521700 ADRB2P07550 413 aa19.48■□□□□ 0.71
TRAPPC9-211ENST00000521700 ME1P48163 572 aa19.48■□□□□ 0.71
TRAPPC9-211ENST00000521700 KCNA1Q09470 495 aa19.48■□□□□ 0.71
TRAPPC9-211ENST00000521700 ZBTB6Q15916 424 aa19.48■□□□□ 0.71
TRAPPC9-211ENST00000521700 ENOX2Q16206 610 aaKnown RBP19.48■□□□□ 0.71
TRAPPC9-211ENST00000521700 PSMD5Q16401 504 aa19.48■□□□□ 0.71
TRAPPC9-211ENST00000521700 TMEM130Q8N3G9 435 aa19.48■□□□□ 0.71
TRAPPC9-211ENST00000521700 HDAC7Q8WUI4 952 aa19.48■□□□□ 0.71
TRAPPC9-211ENST00000521700 DHX58Q96C10 678 aa19.48■□□□□ 0.71
TRAPPC9-211ENST00000521700 HVCN1Q96D96 273 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms