RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 ABT1Q9ULW3 272 aaKnown RBP19.86■□□□□ 0.77
TRAPPC9-210ENST00000521667 STXBP5LQ9Y2K9 1186 aa19.86■□□□□ 0.77
TRAPPC9-210ENST00000521667 ATP8B1O43520 1251 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 PHACTR2O75167 634 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 MMP3P08254 477 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 SLC10A3P09131 477 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 HOXD8P13378 290 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 PHKA2P46019 1235 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 SURF1Q15526 300 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 SPOPLQ6IQ16 392 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 DDX1Q92499 740 aaKnown RBP19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 MINDY3Q9H8M7 445 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 TLL2Q9Y6L7 1015 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 ZNF236Q9UL36 1845 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 FAM170AA1A519 330 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 MANSC4A6NHS7 340 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 SPDYE4A6NLX3 237 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 B4GALT5O43286 388 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 BUB1BO60566 1050 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 GPC5P78333 572 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 TCEAL1Q15170 157 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 TMEM132AQ24JP5 1023 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 ZNF568Q3ZCX4 644 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 CCDC70Q6NSX1 233 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 NT5DC3Q86UY8 548 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 PBKQ96KB5 322 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 CALR3Q96L12 384 aaKnown RBP19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 IFT122Q9HBG6 1241 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 APOBEC3GQ9HC16 384 aaKnown RBP19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 ZCCHC17Q9NP64 241 aaKnown RBP19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 PRMT7Q9NVM4 692 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 TNFSF13BQ9Y275 285 aa19.85■□□□□ 0.77
TRAPPC9-210ENST00000521667 FAM155AB1AL88 458 aaPredicted RBP19.84■□□□□ 0.77
TRAPPC9-210ENST00000521667 KCNK3O14649 394 aa19.84■□□□□ 0.77
TRAPPC9-210ENST00000521667 MCM3P25205 808 aa19.84■□□□□ 0.77
TRAPPC9-210ENST00000521667 TMOD1P28289 359 aa19.84■□□□□ 0.77
TRAPPC9-210ENST00000521667 HADHBP55084 474 aaKnown RBP19.84■□□□□ 0.77
TRAPPC9-210ENST00000521667 CUL2Q13617 745 aa19.84■□□□□ 0.77
TRAPPC9-210ENST00000521667 NCOA4Q13772 614 aa19.84■□□□□ 0.77
TRAPPC9-210ENST00000521667 MORN1Q5T089 497 aa19.84■□□□□ 0.77
TRAPPC9-210ENST00000521667 MTHFD1LQ6UB35 978 aa19.84■□□□□ 0.77
TRAPPC9-210ENST00000521667 IFNLR1Q8IU57 520 aaPredicted RBP19.84■□□□□ 0.77
TRAPPC9-210ENST00000521667 ABCB6Q9NP58 842 aa19.84■□□□□ 0.77
TRAPPC9-210ENST00000521667 COG5Q9UP83 839 aa19.84■□□□□ 0.77
TRAPPC9-210ENST00000521667 AKT3Q9Y243 479 aa19.84■□□□□ 0.77
TRAPPC9-210ENST00000521667 BPIFB4P59827 614 aa19.83■□□□□ 0.77
TRAPPC9-210ENST00000521667 MAP2K5Q13163 448 aa19.83■□□□□ 0.77
TRAPPC9-210ENST00000521667 TAF1CQ15572 869 aaPredicted RBP19.83■□□□□ 0.77
TRAPPC9-210ENST00000521667 DGKDQ16760 1214 aa19.83■□□□□ 0.77
TRAPPC9-210ENST00000521667 FAM187BQ17R55 369 aa19.83■□□□□ 0.77
TRAPPC9-210ENST00000521667 LONRF2Q1L5Z9 754 aa19.83■□□□□ 0.77
TRAPPC9-210ENST00000521667 EEF1DP3Q658K8 133 aa19.83■□□□□ 0.77
TRAPPC9-210ENST00000521667 SMC1BQ8NDV3 1235 aa19.83■□□□□ 0.77
TRAPPC9-210ENST00000521667 ZIC5Q96T25 663 aa19.83■□□□□ 0.77
TRAPPC9-210ENST00000521667 FAM53CQ9NYF3 392 aa19.83■□□□□ 0.77
TRAPPC9-210ENST00000521667 AMFRQ9UKV5 643 aa19.83■□□□□ 0.77
TRAPPC9-210ENST00000521667 A0A087WZ62 844 aa19.83■□□□□ 0.76
TRAPPC9-210ENST00000521667 CLTAP09496 248 aa19.83■□□□□ 0.76
TRAPPC9-210ENST00000521667 IQCF3P0C7M6 154 aa19.83■□□□□ 0.76
TRAPPC9-210ENST00000521667 ACO1P21399 889 aaKnown RBP19.83■□□□□ 0.76
TRAPPC9-210ENST00000521667 TBXAS1P24557 533 aaPredicted RBP19.83■□□□□ 0.76
TRAPPC9-210ENST00000521667 NOP14P78316 857 aaKnown RBP19.83■□□□□ 0.76
TRAPPC9-210ENST00000521667 TNFAIP2Q03169 654 aa19.83■□□□□ 0.76
TRAPPC9-210ENST00000521667 PPFIA1Q13136 1202 aa19.83■□□□□ 0.76
TRAPPC9-210ENST00000521667 PTPROQ16827 1216 aa19.83■□□□□ 0.76
TRAPPC9-210ENST00000521667 THNSL1Q8IYQ7 743 aa19.83■□□□□ 0.76
TRAPPC9-210ENST00000521667 FAM212AQ96EL1 285 aa19.83■□□□□ 0.76
TRAPPC9-210ENST00000521667 HES6Q96HZ4 224 aa19.83■□□□□ 0.76
TRAPPC9-210ENST00000521667 FDXACB1Q9BRP7 624 aaPredicted RBP19.83■□□□□ 0.76
TRAPPC9-210ENST00000521667 IMPG2Q9BZV3 1241 aa19.83■□□□□ 0.76
TRAPPC9-210ENST00000521667 CTTNBP2NLQ9P2B4 639 aa19.83■□□□□ 0.76
TRAPPC9-210ENST00000521667 PCDHB2Q9Y5E7 798 aa19.83■□□□□ 0.76
TRAPPC9-210ENST00000521667 ADCY6O43306 1168 aa19.82■□□□□ 0.76
TRAPPC9-210ENST00000521667 TBC1D8O95759 1140 aa19.82■□□□□ 0.76
TRAPPC9-210ENST00000521667 BEND6Q5SZJ8 279 aaPredicted RBP19.82■□□□□ 0.76
TRAPPC9-210ENST00000521667 ZNF677Q86XU0 584 aa19.82■□□□□ 0.76
TRAPPC9-210ENST00000521667 SELENOOQ9BVL4 669 aa19.82■□□□□ 0.76
TRAPPC9-210ENST00000521667 CDT1Q9H211 546 aa19.82■□□□□ 0.76
TRAPPC9-210ENST00000521667 RBM12Q9NTZ6 932 aaKnown RBP19.82■□□□□ 0.76
TRAPPC9-210ENST00000521667 NUB1Q9Y5A7 615 aa19.82■□□□□ 0.76
TRAPPC9-210ENST00000521667 IRF5Q13568 498 aa19.81■□□□□ 0.76
TRAPPC9-210ENST00000521667 GRIK4Q16099 956 aa19.81■□□□□ 0.76
TRAPPC9-210ENST00000521667 DUOXA2Q1HG44 320 aa19.81■□□□□ 0.76
TRAPPC9-210ENST00000521667 CDR2LQ86X02 465 aaPredicted RBP19.81■□□□□ 0.76
TRAPPC9-210ENST00000521667 IFNL1Q8IU54 200 aa19.81■□□□□ 0.76
TRAPPC9-210ENST00000521667 MTMR12Q9C0I1 747 aa19.81■□□□□ 0.76
TRAPPC9-210ENST00000521667 CLSTN1O94985 981 aa19.81■□□□□ 0.76
TRAPPC9-210ENST00000521667 VTNP04004 478 aa19.81■□□□□ 0.76
TRAPPC9-210ENST00000521667 HOXC6P09630 235 aa19.81■□□□□ 0.76
TRAPPC9-210ENST00000521667 AMHR2Q16671 573 aa19.81■□□□□ 0.76
TRAPPC9-210ENST00000521667 CLEC16AQ2KHT3 1053 aa19.81■□□□□ 0.76
TRAPPC9-210ENST00000521667 ACAD10Q6JQN1 1059 aa19.81■□□□□ 0.76
TRAPPC9-210ENST00000521667 PPP1R16BQ96T49 567 aa19.81■□□□□ 0.76
TRAPPC9-210ENST00000521667 LRRC1Q9BTT6 524 aa19.81■□□□□ 0.76
TRAPPC9-210ENST00000521667 ZEB2O60315 1214 aa19.8■□□□□ 0.76
TRAPPC9-210ENST00000521667 ASS1P00966 412 aaKnown RBP19.8■□□□□ 0.76
TRAPPC9-210ENST00000521667 CST3P01034 146 aaPredicted RBP19.8■□□□□ 0.76
TRAPPC9-210ENST00000521667 MARCH8Q5T0T0 291 aa19.8■□□□□ 0.76
TRAPPC9-210ENST00000521667 CEP120Q8N960 986 aa19.8■□□□□ 0.76
TRAPPC9-210ENST00000521667 USP38Q8NB14 1042 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms