RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 A0A0D9SFI3 127 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 TRABD2BA6NFA1 517 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 TNFRSF10BO14763 440 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 OPHN1O60890 802 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 TADA2AO75478 443 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 ITGA4P13612 1032 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 BCKDHBP21953 392 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 OR1D2P34982 312 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 MLH1P40692 756 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 TARBP2Q15633 366 aaKnown RBP8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 MAPK6Q16659 721 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 PEAR1Q5VY43 1037 aaPredicted RBP8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 FSTL4Q6MZW2 842 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 ZNF746Q6NUN9 644 aaPredicted RBP8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 NIPA1Q7RTP0 329 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 SYT12Q8IV01 421 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 YAF2Q8IY57 180 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 GSTCDQ8NEC7 633 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 FAM227BQ96M60 508 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 ZFP42Q96MM3 310 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 CORO1BQ9BR76 489 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 RNF39Q9H2S5 420 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 GTSE1Q9NYZ3 720 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 APOBEC2Q9Y235 224 aaKnown RBP8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 COL5A1P20908 1838 aaPredicted RBP8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 OATP04181 439 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 DHPSP49366 369 aaPredicted RBP8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 HSP90AA2PQ14568 343 aaPredicted RBP8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 USP39Q53GS9 565 aaKnown RBP8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 FAM171A1Q5VUB5 890 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 PDZD4Q76G19 769 aaPredicted RBP8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 SYT13Q7L8C5 426 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 TRMT1LQ7Z2T5 733 aaKnown RBP8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 SLCO6A1Q86UG4 719 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 SMAP1Q8IYB5 467 aaPredicted RBP8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 PIBF1Q8WXW3 757 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 CAMK1GQ96NX5 476 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 SPZ1Q9BXG8 430 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 TMEM74BQ9NUR3 256 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 DNAAF2Q9NVR5 837 aaKnown RBP8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 MTRRQ9UBK8 725 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 GABBR1Q9UBS5 961 aa8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 SEPT9Q9UHD8 586 aaPredicted RBP8.52□□□□□ -1.05
HMBOX1-208ENST00000521516 TSC2P49815 1807 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 TNRC6BQ9UPQ9 1833 aaKnown RBP8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 ERVH48-1M5A8F1 160 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 DKK1O94907 266 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 PSAPP07602 524 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 HOXD12P35452 270 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 PI4KAP42356 2102 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 DPP6P42658 865 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 EPHA5P54756 1037 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 SLC14A1Q13336 389 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 ARHGAP29Q52LW3 1261 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 GPR155Q7Z3F1 870 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 TICAM2Q86XR7 235 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 DCBLD2Q96PD2 775 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 CEP89Q96ST8 783 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 IFT122Q9HBG6 1241 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 NRBP2Q9NSY0 501 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 INVSQ9Y283 1065 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 IPPQ9Y573 584 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 PCDHA10Q9Y5I2 948 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 FLNCQ14315 2725 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 DOPEY2Q9Y3R5 2298 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 NBPF19A0A087WUL8 3843 aa8.51□□□□□ -1.05
HMBOX1-208ENST00000521516 PCDH15Q96QU1 1955 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 RNF40O75150 1001 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 LRG1P02750 347 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 TTC8Q8TAM2 541 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 RABGGTAQ92696 567 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 RRP36Q96EU6 259 aaKnown RBP8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 LRRC3BQ96PB8 259 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 KRT23Q9C075 422 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 GPR88Q9GZN0 384 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 SNTG2Q9NY99 539 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 KCNK4Q9NYG8 393 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 GIT1Q9Y2X7 761 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 TDRD15B5MCY1 1934 aaKnown RBP8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 RELNP78509 3460 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 E9PAM4 449 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 TRDMT1O14717 391 aaKnown RBP8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 SH3BP5O60239 455 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 SMARCA1P28370 1054 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 ZNF76P36508 570 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 EIF2S3P41091 472 aaKnown RBP8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 ATXN3P54252 364 aaPredicted RBP8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 GRSF1Q12849 480 aaKnown RBP eCLIP8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 GRIK3Q13003 919 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 CYP4A22Q5TCH4 519 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 RASSF3Q86WH2 238 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 CEP57Q86XR8 500 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 LEMD2Q8NC56 503 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 SPATA18Q8TC71 538 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 PI4K2AQ9BTU6 479 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 CAPN10Q9HC96 672 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 SLC6A14Q9UN76 642 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 BACE2Q9Y5Z0 518 aa8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 MUC22E2RYF6 1773 aaPredicted RBP8.5□□□□□ -1.05
HMBOX1-208ENST00000521516 GJB3O75712 270 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms