RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 HELQQ8TDG4 1101 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 LPPQ93052 612 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 FAM193BQ96PV7 902 aaPredicted RBP6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 MED15Q96RN5 788 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 YME1L1Q96TA2 773 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 GAD1Q99259 594 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 CGRRF1Q99675 332 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 FAM213AQ9BRX8 229 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 ZBED2Q9BTP6 218 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 SRRTQ9BXP5 876 aaKnown RBP6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 PCIF1Q9H4Z3 704 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 FAM124BQ9H5Z6 455 aaPredicted RBP6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 TBC1D13Q9NVG8 400 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 INTS13Q9NVM9 706 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 ARMCX3Q9UH62 379 aaPredicted RBP6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 MSRAQ9UJ68 235 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 HES2Q9Y543 173 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 MKI67P46013 3256 aaKnown RBP6.9□□□□□ -1.31
IGHV4-55-201ENST00000520889 SCN1AP35498 2009 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 ARHGEF37A1IGU5 675 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 TBKBP1A7MCY6 615 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 MEIS3P2A8K0S8 358 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 MEFVO15553 781 aaPredicted RBP6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 N4BP1O75113 896 aaKnown RBP6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 UPP2O95045 317 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 ALDH2P05091 517 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 FGFR1P11362 822 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 HARSP12081 509 aaKnown RBP6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 PPM1AP35813 382 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 PNPLA4P41247 253 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 CASP4P49662 377 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 SCNN1GP51170 649 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 VAMP7P51809 220 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 OSTNP61366 133 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 ERVK-21P61565 698 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 PLCB3Q01970 1234 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 UBE3AQ05086 875 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 ELAVL2Q12926 359 aaKnown RBP6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 BTG3Q14201 252 aaPredicted RBP6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 NCAPHQ15003 741 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 IQCB1Q15051 598 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 TPD52L1Q16890 204 aaPredicted RBP6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 DUOXA2Q1HG44 320 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 ANO6Q4KMQ2 910 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 ZBTB41Q5SVQ8 909 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 CDKAL1Q5VV42 579 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 CEP135Q66GS9 1140 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 FAM109BQ6ICB4 259 aaPredicted RBP6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 DCLRE1AQ6PJP8 1040 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 C15orf39Q6ZRI6 1047 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 TRIM59Q8IWR1 403 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 COLGALT2Q8IYK4 626 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 ANKRD20A12PQ8NF67 263 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 SPATA18Q8TC71 538 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 TAF4BQ92750 862 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 SLC35C1Q96A29 364 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 SAAL1Q96ER3 474 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 ANKRD36BP1Q96IX9 119 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 FNBP1Q96RU3 617 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 DNAJC25Q9H1X3 360 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 IKZF4Q9H2S9 585 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 CWH43Q9H720 699 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 VRTNQ9H8Y1 702 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 MIOSQ9NXC5 875 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 MAGEC2Q9UBF1 373 aaPredicted RBP6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 ITGA11Q9UKX5 1188 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 LZTS1Q9Y250 596 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 COQ4Q9Y3A0 265 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 NFE2L3Q9Y4A8 694 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 DAAM1Q9Y4D1 1078 aa6.89□□□□□ -1.31
IGHV4-55-201ENST00000520889 PLXNA4Q9HCM2 1894 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 ANO9A1A5B4 782 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 GTPBP10A4D1E9 387 aaKnown RBP6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 GOLGA8IPA6NC78 632 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 GOLGA8JA6NMD2 632 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 BECN2A8MW95 431 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 PIRO00625 290 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 EFEMP2O95967 443 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 C1RP00736 705 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 TNNC2P02585 160 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 C4BPAP04003 597 aaKnown RBP6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 GALTP07902 379 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 TMEM191BP0C7N4 346 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 LINC00271P0C7V0 271 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 ZNF18P17022 549 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 TNNI1P19237 187 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 ATICP31939 592 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 ALDH7A1P49419 539 aaKnown RBP6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 STX17P56962 302 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 TPM4P67936 248 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 RBP5P82980 135 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 RNASELQ05823 741 aaKnown RBP6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 CETN1Q12798 172 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 MAN2A1Q16706 1144 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 UPP1Q16831 310 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 ZACNQ401N2 412 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 CCDC40Q4G0X9 1142 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 SEZ6Q53EL9 994 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 TCP11X2Q5H9J9 407 aa6.88□□□□□ -1.31
IGHV4-55-201ENST00000520889 KRT39Q6A163 491 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms