RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 NLRP9Q7RTR0 991 aa13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 CCNL1Q9UK58 526 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 ATF5Q9Y2D1 282 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC9-208ENST00000520857 BHMG1C9JSJ3 638 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 F5H6K3 240 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 NSFP46459 744 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 ADAMTSL3P82987 1691 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 MGAT5Q09328 741 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 PKN2Q16513 984 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 LLGL2Q6P1M3 1020 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 EPS8L1Q8TE68 723 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 CYTH2Q99418 400 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 LRRC4BQ9NT99 713 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 GTF3C4Q9UKN8 822 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 FAM98CQ17RN3 349 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 LVRNQ6Q4G3 990 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 BBOF1Q8ND07 529 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 MORC4Q8TE76 937 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 C11orf70Q9BRQ4 267 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 LXNQ9BS40 222 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 MOV10L1Q9BXT6 1211 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 ZCWPW1Q9H0M4 648 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 CHKBQ9Y259 395 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 R3HDM2Q9Y2K5 976 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 TBX3O15119 743 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 HAUS5O94927 633 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 CETPP11597 493 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 CPA2P48052 419 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 CAV1Q03135 178 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 GPS1Q13098 491 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 BMT2Q1RMZ1 405 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 SYDE2Q5VT97 1194 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 PADI6Q6TGC4 694 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 CFAP61Q8NHU2 1237 aa13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 IQCGQ9H095 443 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-208ENST00000520857 SLC16A4O15374 487 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 LGR5O75473 907 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 LINGO3P0C6S8 592 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 ESRRAP11474 423 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 PIK3CAP42336 1068 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 PEX3P56589 373 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 WDR4P57081 412 aaKnown RBP13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 NFIAQ12857 509 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 RNF217Q8TC41 542 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 SPIRE2Q8WWL2 714 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 PI4K2AQ9BTU6 479 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 AAASQ9NRG9 546 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 UVRAGQ9P2Y5 699 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 NEU2Q9Y3R4 380 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 A0A1B0GUL6 1792 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 ZNF335Q9H4Z2 1342 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 UBAP1LF5GYI3 381 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 CAPN9O14815 690 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 SLITRK3O94933 977 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 UBTFL6P0CB48 400 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 ALADP13716 330 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 CHRNB2P17787 502 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 KCNA3P22001 575 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 C6orf163Q5TEZ5 329 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 MIER3Q7Z3K6 550 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 FAM84AQ96KN4 292 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 ACCSQ96QU6 501 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 HSPBP1Q9NZL4 362 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 NENFQ9UMX5 172 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 C2CD2Q9Y426 696 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 DCCP43146 1447 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 SGK1O00141 431 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 TPBGLP0DKB5 382 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 SNHG28P0DPA3 235 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 RFX1P22670 979 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 SHMT1P34896 483 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 RPA3P35244 121 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 NOP14P78316 857 aaKnown RBP13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 SPIRE1Q08AE8 756 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 PDIA2Q13087 525 aaKnown RBP13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 FAM102BQ5T8I3 360 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 RNF220Q5VTB9 566 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 ANO7Q6IWH7 933 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 ARHGEF1Q92888 912 aaKnown RBP13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 POLR3CQ9BUI4 534 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 GPR88Q9GZN0 384 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 DENND2DQ9H6A0 471 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 LRRC19Q9H756 370 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 ZNF219Q9P2Y4 722 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 SEL1LQ9UBV2 794 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 LRP5O75197 1615 aa13.61□□□□□ -0.23
TRAPPC9-208ENST00000520857 PEX11AO75192 247 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 OAS1P00973 400 aaKnown RBP13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 CYP11B1P15538 503 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 PRELPP51888 382 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 DYNLT1P63172 113 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 SNX30Q5VWJ9 437 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 C1orf186Q6ZWK4 172 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 TTC17Q96AE7 1141 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 CCDC17Q96LX7 622 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 CDCA7Q9BWT1 371 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 COL4A1P02462 1669 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 ZSCAN5DPP0CG00 497 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 KRT4P19013 534 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 ARSEP51690 589 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms