RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 ZNF844Q08AG5 666 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 ACVR2BQ13705 512 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 RCN2Q14257 317 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 KIF22Q14807 665 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 FAM133BQ5BKY9 247 aaKnown RBP9.23□□□□□ -0.93
SHPRH-208ENST00000520752 RESP18Q5W5W9 173 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 ANKRD34AQ69YU3 496 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 FBXL19Q6PCT2 694 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 B3GNT6Q6ZMB0 384 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 Q6ZNX1 250 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 SPATA24Q86W54 205 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 LONP2Q86WA8 852 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 NELFCDQ8IXH7 590 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 ZBED8Q8IZ13 594 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 BBS5Q8N3I7 341 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 FNDC8Q8TC99 324 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 ZNF296Q8WUU4 475 aaPredicted RBP9.23□□□□□ -0.93
SHPRH-208ENST00000520752 DGCR14Q96DF8 476 aaKnown RBP9.23□□□□□ -0.93
SHPRH-208ENST00000520752 CDK5RAP3Q96JB5 506 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 CAPZA3Q96KX2 299 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 NUDCD1Q96RS6 583 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 HGH1Q9BTY7 390 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 METTL14Q9HCE5 456 aaKnown RBP9.23□□□□□ -0.93
SHPRH-208ENST00000520752 RAD18Q9NS91 495 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.23□□□□□ -0.93
SHPRH-208ENST00000520752 AIPL1Q9NZN9 384 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 ZNHIT2Q9UHR6 403 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 MAN1B1Q9UKM7 699 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 PRELID1Q9Y255 219 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 EID1Q9Y6B2 187 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 SLC30A1Q9Y6M5 507 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 CEP170BQ9Y4F5 1589 aaPredicted RBP9.23□□□□□ -0.93
SHPRH-208ENST00000520752 PREX2Q70Z35 1606 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 RFX7Q2KHR2 1363 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 ROBO2Q9HCK4 1378 aa9.23□□□□□ -0.93
SHPRH-208ENST00000520752 A0A1W2PQC6 194 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 TRAFD1O14545 582 aaPredicted RBP9.22□□□□□ -0.93
SHPRH-208ENST00000520752 TBCAO75347 108 aaKnown RBP9.22□□□□□ -0.93
SHPRH-208ENST00000520752 SERPINB7O75635 380 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 ALX3O95076 343 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 UNC5CO95185 931 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 TIAF1O95411 115 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 LCA5LO95447 670 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 EYA4O95677 639 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 MYBP10242 640 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 HSPA8P11142 646 aaKnown RBP9.22□□□□□ -0.93
SHPRH-208ENST00000520752 TNNC1P63316 161 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 AP1B1Q10567 949 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 BOLA3Q53S33 107 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 SLC4A10Q6U841 1118 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 CD163Q86VB7 1156 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 LSMEM2Q8N112 164 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 FBXL16Q8N461 479 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 GOLM1Q8NBJ4 401 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 CCDC110Q8TBZ0 833 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 LRRC8CQ8TDW0 803 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 GATAD2BQ8WXI9 593 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 PRCCQ92733 491 aaPredicted RBP9.22□□□□□ -0.93
SHPRH-208ENST00000520752 USP6NLQ92738 828 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 PGM2Q96G03 612 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 ZNF274Q96GC6 653 aaPredicted RBP9.22□□□□□ -0.93
SHPRH-208ENST00000520752 DNAJC7Q99615 494 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 TUBB6Q9BUF5 446 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 CEP41Q9BYV8 373 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 ASCC2Q9H1I8 757 aaPredicted RBP9.22□□□□□ -0.93
SHPRH-208ENST00000520752 EURLQ9NYK6 297 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 ZNF212Q9UDV6 495 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 ZNF180Q9UJW8 692 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 FBXO9Q9UK97 447 aaPredicted RBP9.22□□□□□ -0.93
SHPRH-208ENST00000520752 REXO2Q9Y3B8 237 aaKnown RBP9.22□□□□□ -0.93
SHPRH-208ENST00000520752 HBS1LQ9Y450 684 aaKnown RBP9.22□□□□□ -0.93
SHPRH-208ENST00000520752 PCDHA5Q9Y5H7 936 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 CAPN6Q9Y6Q1 641 aa9.22□□□□□ -0.93
SHPRH-208ENST00000520752 DLC1Q96QB1 1528 aa9.21□□□□□ -0.93
SHPRH-208ENST00000520752 MYH7P12883 1935 aa9.21□□□□□ -0.93
SHPRH-208ENST00000520752 PTPDC1A2A3K4 754 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 FAM221AA4D161 298 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 C1QTNF9BB2RNN3 333 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 IDH3BO43837 385 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 PDE5AO76074 875 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 LDHAP00338 332 aaKnown RBP9.21□□□□□ -0.94
SHPRH-208ENST00000520752 TFRCP02786 760 aaKnown RBP9.21□□□□□ -0.94
SHPRH-208ENST00000520752 LYNP07948 512 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 ENDOUP21128 410 aaKnown RBP9.21□□□□□ -0.94
SHPRH-208ENST00000520752 HSD17B3P37058 310 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 CHRNA4P43681 627 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 MMP13P45452 471 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 IREB2P48200 963 aaKnown RBP9.21□□□□□ -0.94
SHPRH-208ENST00000520752 KIF23Q02241 960 aaPredicted RBP9.21□□□□□ -0.94
SHPRH-208ENST00000520752 SOX4Q06945 474 aaPredicted RBP9.21□□□□□ -0.94
SHPRH-208ENST00000520752 EIF4A2Q14240 407 aaKnown RBP9.21□□□□□ -0.94
SHPRH-208ENST00000520752 MEA1Q16626 185 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 SNAP47Q5SQN1 464 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 DUS1LQ6P1R4 473 aaKnown RBP9.21□□□□□ -0.94
SHPRH-208ENST00000520752 BNC2Q6ZN30 1099 aaPredicted RBP9.21□□□□□ -0.94
SHPRH-208ENST00000520752 FAM196AQ6ZSG2 479 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 TXNRD3Q86VQ6 643 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 COL23A1Q86Y22 540 aaPredicted RBP9.21□□□□□ -0.94
SHPRH-208ENST00000520752 PLEKHO2Q8TD55 490 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 ACMSDQ8TDX5 336 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms