RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 ZNF571Q7Z3V5 609 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 SLFN11Q7Z7L1 901 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 DAAM2Q86T65 1068 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 TLK2Q86UE8 772 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 FBXO11Q86XK2 927 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 SFR1Q86XK3 245 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 RHOT2Q8IXI1 618 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 FAM186BQ8IYM0 893 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 UBL4BQ8N7F7 174 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 LRRC57Q8N9N7 239 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 GMCL1P1Q8NEA9 526 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 NEK9Q8TD19 979 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 MORC4Q8TE76 937 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 PPP1R13LQ8WUF5 828 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 UBLCP1Q8WVY7 318 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 GMCL1Q96IK5 515 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 FGD4Q96M96 766 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 AGBL1Q96MI9 1066 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 REEP2Q9BRK0 252 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 NSRP1Q9H0G5 558 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 CARD9Q9H257 536 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 HIPK3Q9H422 1215 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 SLC38A10Q9HBR0 1119 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 RNF146Q9NTX7 359 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 CXXC1Q9P0U4 656 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 MTRF1LQ9UGC7 380 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 NENFQ9UMX5 172 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 FRMD4BQ9Y2L6 1034 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 XIRP2A4UGR9 3374 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 REV3LO60673 3130 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 GBF1Q92538 1859 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 E7EVH7 732 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 DYNC1LI2O43237 492 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 PPP1R11O60927 126 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 MED24O75448 989 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 KRT14P02533 472 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 FGBP02675 491 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 BMP3P12645 472 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 KRT13P13646 458 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 MYOGP15173 224 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 COL9A1P20849 921 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 GUCY2CP25092 1073 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 CIITAP33076 1130 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 SOX5P35711 763 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 GJA9P57773 515 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 MYL7Q01449 175 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 GIT2Q14161 759 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 ADGRE1Q14246 886 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 SKIV2LQ15477 1246 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 ENOX2Q16206 610 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 ECM1Q16610 540 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 PRR16Q569H4 304 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 TMEM63BQ5T3F8 832 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 SWT1Q5T5J6 900 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 KCTD16Q68DU8 428 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 PSRC1Q6PGN9 363 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 NSMFQ6X4W1 530 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 KCTD1Q719H9 257 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 IRF2BP2Q7Z5L9 587 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 FBXO16Q8IX29 292 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 FAM126BQ8IXS8 530 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 GLIS3Q8NEA6 775 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 CHST13Q8NET6 341 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 ETNPPLQ8TBG4 499 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 MYCBPAPQ8TBZ2 947 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 MKL1Q969V6 931 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 SCLYQ96I15 445 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 FMO2Q99518 471 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 STK33Q9BYT3 514 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 AP5M1Q9H0R1 490 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 TRPV6Q9H1D0 765 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 CENPHQ9H3R5 247 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 ACAD9Q9H845 621 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 SLC28A3Q9HAS3 691 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 IL23AQ9NPF7 189 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 PDGFCQ9NRA1 345 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 THEGQ9P2T0 379 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 FBXO40Q9UH90 709 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 ODF2LQ9ULJ1 636 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 ASTN1O14525 1302 aa9.28□□□□□ -0.92
CTNNA1-223ENST00000520520 ESYT3A0FGR9 886 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 GMNCA6NCL1 334 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 SOWAHBA6NEL2 793 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 CCDC169A6NNP5 214 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 BHMG1C9JSJ3 638 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 CYP3A4P08684 503 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 FAM153BP0C7A2 387 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 CST5P28325 142 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 CDK7P50613 346 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 STAT2P52630 851 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 HADHBP55084 474 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 PTENP60484 403 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 ZNF844Q08AG5 666 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 ITGA7Q13683 1181 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 FSCN1Q16658 493 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 KRT71Q3SY84 523 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 FAM153CQ494X1 144 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 RNF187Q5TA31 235 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 SEL1L2Q5TEA6 688 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 GKAP1Q5VSY0 366 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms