RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 POP1Q99575 1024 aaKnown RBP12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 NCAPGQ9BPX3 1015 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 NTPCRQ9BSD7 190 aaKnown RBP12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 ZNF341Q9BYN7 854 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 KCNG1Q9UIX4 513 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 PCDHB2Q9Y5E7 798 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 CNTNAP1P78357 1384 aa12.1□□□□□ -0.47
NUDCD1-203ENST00000519607 HNRNPDLO14979 420 aaKnown RBP12.1□□□□□ -0.47
NUDCD1-203ENST00000519607 TTC4O95801 387 aa12.1□□□□□ -0.47
NUDCD1-203ENST00000519607 GARTP22102 1010 aa12.1□□□□□ -0.47
NUDCD1-203ENST00000519607 MAP2K2P36507 400 aa12.1□□□□□ -0.47
NUDCD1-203ENST00000519607 ADCY8P40145 1251 aa12.1□□□□□ -0.47
NUDCD1-203ENST00000519607 CETN2P41208 172 aa12.1□□□□□ -0.47
NUDCD1-203ENST00000519607 NSFP46459 744 aaKnown RBP12.1□□□□□ -0.47
NUDCD1-203ENST00000519607 CENPCQ03188 943 aa12.1□□□□□ -0.47
NUDCD1-203ENST00000519607 BRDTQ58F21 947 aaPredicted RBP12.1□□□□□ -0.47
NUDCD1-203ENST00000519607 LIN9Q5TKA1 542 aa12.1□□□□□ -0.47
NUDCD1-203ENST00000519607 GBP7Q8N8V2 638 aaPredicted RBP12.1□□□□□ -0.47
NUDCD1-203ENST00000519607 TMEM39BQ9GZU3 492 aa12.1□□□□□ -0.47
NUDCD1-203ENST00000519607 KIAA1586Q9HCI6 787 aa12.1□□□□□ -0.47
NUDCD1-203ENST00000519607 HOMER2Q9NSB8 354 aa12.1□□□□□ -0.47
NUDCD1-203ENST00000519607 ANAPC5Q9UJX4 755 aa12.1□□□□□ -0.47
NUDCD1-203ENST00000519607 TESPA1A2RU30 521 aaPredicted RBP12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 CFAP73A6NFT4 308 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 THAP12O43422 761 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 SUN1O94901 812 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 UGCGQ16739 394 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 TBC1D10BQ4KMP7 808 aaPredicted RBP12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 ARHGEF16Q5VV41 709 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 PLA2G4FQ68DD2 849 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 PPP1R2P3Q6NXS1 205 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 ZNF365Q70YC5 407 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 NLRX1Q86UT6 975 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 MCOLN2Q8IZK6 566 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 CCDC89Q8N998 374 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 ATP6V0A1Q93050 837 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 ZKSCAN4Q969J2 545 aaPredicted RBP12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 BICD1Q96G01 975 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 TAAR1Q96RJ0 339 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 RMDN3Q96TC7 470 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 MYCBPQ99417 103 aaPredicted RBP12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 MOV10L1Q9BXT6 1211 aaKnown RBP12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 GLIS2Q9BZE0 524 aaPredicted RBP12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 CD248Q9HCU0 757 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 MRPL47Q9HD33 250 aaKnown RBP12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 KCNK9Q9NPC2 374 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 PCDHA10Q9Y5I2 948 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 RGPD3A6NKT7 1758 aaPredicted RBP12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 RGPD4Q7Z3J3 1758 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 WDR81Q562E7 1941 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 TMEM150BA6NC51 233 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 GRIN3BO60391 1043 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 APBA3O96018 575 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 UNGP13051 313 aaPredicted RBP12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 EZRP15311 586 aaKnown RBP12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 RPS6P62753 249 aaKnown RBP12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 PTP4A2Q12974 167 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 MKRN3Q13064 507 aaKnown RBP12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 SPP2Q13103 211 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 SPRED3Q2MJR0 410 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 ZNF568Q3ZCX4 644 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 CCDC38Q502W7 563 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 XRRA1Q6P2D8 792 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 CCDC63Q8NA47 563 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 MCPH1Q8NEM0 835 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 DHX38Q92620 1227 aaKnown RBP12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 CEP170P1Q96L14 293 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 IFT74Q96LB3 600 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 FNBP1Q96RU3 617 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 SLC38A10Q9HBR0 1119 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 RAVER2Q9HCJ3 691 aaKnown RBP12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 SLC12A4Q9UP95 1085 aa12.09□□□□□ -0.47
NUDCD1-203ENST00000519607 TMEM120BA0PK00 339 aa12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 MAFGO15525 162 aa12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 SNX3O60493 162 aa12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 ZBED4O75132 1171 aa12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 TCEA3O75764 348 aa12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 RAD17O75943 681 aa12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 ITGA8P53708 1063 aa12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 GSCP56915 257 aaPredicted RBP12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 LMNB2Q03252 620 aa12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 RHBDF2Q6PJF5 856 aa12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 ARHGEF18Q6ZSZ5 1173 aa12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 CPNE8Q86YQ8 564 aa12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 DDX23Q9BUQ8 820 aaKnown RBP12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 KIFC3Q9BVG8 833 aa12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 DCLK3Q9C098 648 aa12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 CHST7Q9NS84 486 aa12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 GEMIN8Q9NWZ8 242 aaKnown RBP12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 USP15Q9Y4E8 981 aaPredicted RBP12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 PSTPIP1O43586 416 aa12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 C21orf2O43822 256 aa12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 MGRN1O60291 552 aa12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 SORBS3O60504 671 aa12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 DGAT1O75907 488 aa12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 FDX1P10109 184 aa12.08□□□□□ -0.48
NUDCD1-203ENST00000519607 IRX3P78415 501 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms