RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 TRIM59Q8IWR1 403 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 TDHQ8IZJ6 230 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 PHOSPHO2Q8TCD6 241 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 PARD3BQ8TEW8 1205 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 CACTINQ8WUQ7 758 aaKnown RBP15.32■□□□□ 0.04
SDC2-203ENST00000519587 KIF12Q96FN5 646 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 RNPC3Q96LT9 517 aaKnown RBP15.32■□□□□ 0.04
SDC2-203ENST00000519587 GAD1Q99259 594 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 TMEM117Q9H0C3 514 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 RNF39Q9H2S5 420 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 PDE11AQ9HCR9 933 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 KLK14Q9P0G3 267 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 KANSL3Q9P2N6 904 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 INPP5FQ9Y2H2 1132 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 LACTBL1A8MY62 500 aa15.31■□□□□ 0.04
SDC2-203ENST00000519587 UPP2O95045 317 aa15.31■□□□□ 0.04
SDC2-203ENST00000519587 TMEM191BP0C7N4 346 aa15.31■□□□□ 0.04
SDC2-203ENST00000519587 FGFR1P11362 822 aa15.31■□□□□ 0.04
SDC2-203ENST00000519587 KCNE1P15382 129 aa15.31■□□□□ 0.04
SDC2-203ENST00000519587 GTF2H1P32780 548 aa15.31■□□□□ 0.04
SDC2-203ENST00000519587 DEFB103AP81534 67 aa15.31■□□□□ 0.04
SDC2-203ENST00000519587 MAN2A1Q16706 1144 aa15.31■□□□□ 0.04
SDC2-203ENST00000519587 IRF2BP1Q8IU81 584 aa15.31■□□□□ 0.04
SDC2-203ENST00000519587 LRRC43Q8N309 656 aa15.31■□□□□ 0.04
SDC2-203ENST00000519587 HELQQ8TDG4 1101 aa15.31■□□□□ 0.04
SDC2-203ENST00000519587 TOP1MTQ969P6 601 aa15.31■□□□□ 0.04
SDC2-203ENST00000519587 BORCS6Q96GS4 357 aa15.31■□□□□ 0.04
SDC2-203ENST00000519587 ANKRD36BP1Q96IX9 119 aa15.31■□□□□ 0.04
SDC2-203ENST00000519587 ZFP42Q96MM3 310 aa15.31■□□□□ 0.04
SDC2-203ENST00000519587 UBQLN1Q9UMX0 589 aaKnown RBP15.31■□□□□ 0.04
SDC2-203ENST00000519587 R3HCC1Q9Y3T6 440 aaKnown RBP15.31■□□□□ 0.04
SDC2-203ENST00000519587 MEIS3P2A8K0S8 358 aa15.3■□□□□ 0.04
SDC2-203ENST00000519587 PES1O00541 588 aaKnown RBP15.3■□□□□ 0.04
SDC2-203ENST00000519587 OFD1O75665 1012 aa15.3■□□□□ 0.04
SDC2-203ENST00000519587 THP07101 528 aa15.3■□□□□ 0.04
SDC2-203ENST00000519587 ATP2A2P16615 1042 aaKnown RBP15.3■□□□□ 0.04
SDC2-203ENST00000519587 MXI1P50539 228 aa15.3■□□□□ 0.04
SDC2-203ENST00000519587 TFAMQ00059 246 aaKnown RBP15.3■□□□□ 0.04
SDC2-203ENST00000519587 RNASELQ05823 741 aaKnown RBP15.3■□□□□ 0.04
SDC2-203ENST00000519587 CETN1Q12798 172 aa15.3■□□□□ 0.04
SDC2-203ENST00000519587 COL4A6Q14031 1691 aa15.3■□□□□ 0.04
SDC2-203ENST00000519587 KRT31Q15323 416 aa15.3■□□□□ 0.04
SDC2-203ENST00000519587 DUOXA2Q1HG44 320 aa15.3■□□□□ 0.04
SDC2-203ENST00000519587 FILIP1LQ4L180 1135 aa15.3■□□□□ 0.04
SDC2-203ENST00000519587 XKR4Q5GH76 650 aa15.3■□□□□ 0.04
SDC2-203ENST00000519587 CLLU1OSQ5K130 101 aa15.3■□□□□ 0.04
SDC2-203ENST00000519587 JADE1Q6IE81 842 aa15.3■□□□□ 0.04
SDC2-203ENST00000519587 ALKAL1Q6UXT8 129 aa15.3■□□□□ 0.04
SDC2-203ENST00000519587 BEST2Q8NFU1 509 aa15.3■□□□□ 0.04
SDC2-203ENST00000519587 SLC35C1Q96A29 364 aa15.3■□□□□ 0.04
SDC2-203ENST00000519587 YME1L1Q96TA2 773 aa15.3■□□□□ 0.04
SDC2-203ENST00000519587 TUBGCP2Q9BSJ2 902 aa15.3■□□□□ 0.04
SDC2-203ENST00000519587 ZBED2Q9BTP6 218 aa15.3■□□□□ 0.04
SDC2-203ENST00000519587 PRDM6Q9NQX0 595 aa15.3■□□□□ 0.04
SDC2-203ENST00000519587 INTS13Q9NVM9 706 aa15.3■□□□□ 0.04
SDC2-203ENST00000519587 SMIM28A0A1B0GU29 152 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 CARNS1A5YM72 827 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 LRRIQ3A6PVS8 624 aaPredicted RBP15.29■□□□□ 0.04
SDC2-203ENST00000519587 TBKBP1A7MCY6 615 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 SERPINC1P01008 464 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 AFPP02771 609 aaKnown RBP15.29■□□□□ 0.04
SDC2-203ENST00000519587 TPM3P06753 285 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 NFICP08651 508 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 TRIM49P0CI25 452 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 TRIM49CP0CI26 452 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 SCNN1GP51170 649 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 CLDN10P78369 228 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 MYL7Q01449 175 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 GLRA4Q5JXX5 417 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 RASIP1Q5U651 963 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 GAS2L3Q86XJ1 694 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 CRIPAKQ8N1N5 446 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 FAM193BQ96PV7 902 aaPredicted RBP15.29■□□□□ 0.04
SDC2-203ENST00000519587 MTMR12Q9C0I1 747 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 RBSNQ9H1K0 784 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 HSD3B7Q9H2F3 369 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 TMEM8AQ9HCN3 771 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 RNF19AQ9NV58 838 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 LIMA1Q9UHB6 759 aaKnown RBP15.29■□□□□ 0.04
SDC2-203ENST00000519587 ITGA11Q9UKX5 1188 aa15.29■□□□□ 0.04
SDC2-203ENST00000519587 PTGESO14684 152 aa15.28■□□□□ 0.04
SDC2-203ENST00000519587 PHACTR2O75167 634 aa15.28■□□□□ 0.04
SDC2-203ENST00000519587 DGKIO75912 1065 aa15.28■□□□□ 0.04
SDC2-203ENST00000519587 GJB5O95377 273 aa15.28■□□□□ 0.04
SDC2-203ENST00000519587 ATP1A3P13637 1013 aa15.28■□□□□ 0.04
SDC2-203ENST00000519587 CYP3A5P20815 502 aa15.28■□□□□ 0.04
SDC2-203ENST00000519587 MCCD1P59942 119 aaPredicted RBP15.28■□□□□ 0.04
SDC2-203ENST00000519587 TUSC3Q13454 348 aa15.28■□□□□ 0.04
SDC2-203ENST00000519587 BIRC3Q13489 604 aa15.28■□□□□ 0.04
SDC2-203ENST00000519587 FKBP15Q5T1M5 1219 aa15.28■□□□□ 0.04
SDC2-203ENST00000519587 FAM117BQ6P1L5 589 aa15.28■□□□□ 0.04
SDC2-203ENST00000519587 HERC6Q8IVU3 1022 aa15.28■□□□□ 0.04
SDC2-203ENST00000519587 EFCAB13Q8IY85 973 aa15.28■□□□□ 0.04
SDC2-203ENST00000519587 CMTR2Q8IYT2 770 aaKnown RBP15.28■□□□□ 0.04
SDC2-203ENST00000519587 UROC1Q96N76 676 aa15.28■□□□□ 0.04
SDC2-203ENST00000519587 PPP1R10Q96QC0 940 aaKnown RBP15.28■□□□□ 0.04
SDC2-203ENST00000519587 IMPG2Q9BZV3 1241 aa15.28■□□□□ 0.04
SDC2-203ENST00000519587 TBC1D13Q9NVG8 400 aa15.28■□□□□ 0.04
SDC2-203ENST00000519587 TAB2Q9NYJ8 693 aa15.28■□□□□ 0.04
SDC2-203ENST00000519587 CXXC1Q9P0U4 656 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms