RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 FGFR3P22607 806 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 NMT1P30419 496 aaKnown RBP10.22□□□□□ -0.77
HDAC3-215ENST00000519474 BRCC3P46736 316 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 YARSP54577 528 aaKnown RBP10.22□□□□□ -0.77
HDAC3-215ENST00000519474 ZBTB6Q15916 424 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 ZC2HC1CQ53FD0 456 aaPredicted RBP10.22□□□□□ -0.77
HDAC3-215ENST00000519474 FOXD4L5Q5VV16 416 aaPredicted RBP10.22□□□□□ -0.77
HDAC3-215ENST00000519474 SV2BQ7L1I2 683 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 DYMQ7RTS9 669 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 ZNF720Q7Z2F6 126 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 GLYCTKQ8IVS8 523 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 TMEM130Q8N3G9 435 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 KRI1Q8N9T8 703 aaKnown RBP10.22□□□□□ -0.77
HDAC3-215ENST00000519474 C3orf58Q8NDZ4 430 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 HDAC7Q8WUI4 952 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 FOXD4L4Q8WXT5 416 aaPredicted RBP10.22□□□□□ -0.77
HDAC3-215ENST00000519474 PIK3R5Q8WYR1 880 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 EDAQ92838 391 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 C18orf25Q96B23 403 aaPredicted RBP10.22□□□□□ -0.77
HDAC3-215ENST00000519474 DNAJC19Q96DA6 116 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 DDX27Q96GQ7 796 aaKnown RBP10.22□□□□□ -0.77
HDAC3-215ENST00000519474 RIPOR3Q96MK2 946 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 TTPALQ9BTX7 342 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 STRA6Q9BX79 667 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 ZHX3Q9H4I2 956 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 PARVGQ9HBI0 331 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.22□□□□□ -0.77
HDAC3-215ENST00000519474 MYO10Q9HD67 2058 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 CUL9Q8IWT3 2517 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 TTC26A0AVF1 554 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 PRR33A8MZF0 331 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 C2CD4DB7Z1M9 353 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 PPP6R2O75170 966 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 RFPL2O75678 378 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 PIGRP01833 764 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 KRT18P05783 430 aaKnown RBP10.21□□□□□ -0.77
HDAC3-215ENST00000519474 CLTAP09496 248 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 HARSP12081 509 aaKnown RBP10.21□□□□□ -0.77
HDAC3-215ENST00000519474 SP100P23497 879 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-215ENST00000519474 TNFSF9P41273 254 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 ZXDAP98168 799 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 SLC39A4Q6P5W5 647 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 RSPO2Q6UXX9 243 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-215ENST00000519474 SPRYD3Q8NCJ5 442 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 CMASQ8NFW8 434 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-215ENST00000519474 RASSF8Q8NHQ8 419 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 ZNF592Q92610 1267 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 DDX12PQ92771 950 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 SNX27Q96L92 541 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 UROC1Q96N76 676 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 ZNF396Q96N95 335 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-215ENST00000519474 NECTIN4Q96NY8 510 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 ST6GALNAC4Q9H4F1 302 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 PLEKHA4Q9H4M7 779 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 PLEKHA5Q9HAU0 1116 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 MAN1C1Q9NR34 630 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 TOPORSQ9NS56 1045 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-215ENST00000519474 CNTN3Q9P232 1028 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 STK17AQ9UEE5 414 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 LIMD1Q9UGP4 676 aa10.21□□□□□ -0.77
HDAC3-215ENST00000519474 A0A0B4J269 797 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 LACTBL1A8MY62 500 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 I3L4J1 428 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 SPTLC2O15270 562 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 FAM189A1O60320 539 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 TBC1D4O60343 1298 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 SF3B1O75533 1304 aaKnown RBP eCLIP10.2□□□□□ -0.785e-8■■■■■ 129.2
HDAC3-215ENST00000519474 GLUD1P00367 558 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 ZSCAN22P10073 491 aaPredicted RBP10.2□□□□□ -0.78
HDAC3-215ENST00000519474 SCP2P22307 547 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 RPL9P32969 192 aaKnown RBP10.2□□□□□ -0.78
HDAC3-215ENST00000519474 MYH11P35749 1972 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 SPAG1Q07617 926 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 ELAVL2Q12926 359 aaKnown RBP10.2□□□□□ -0.78
HDAC3-215ENST00000519474 PKP1Q13835 747 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 RAB33AQ14088 237 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 MRPL58Q14197 206 aaKnown RBP10.2□□□□□ -0.78
HDAC3-215ENST00000519474 NOLC1Q14978 699 aaKnown RBP eCLIP10.2□□□□□ -0.78
HDAC3-215ENST00000519474 STK38Q15208 465 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 ZBTB41Q5SVQ8 909 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 AXDND1Q5T1B0 1012 aaPredicted RBP10.2□□□□□ -0.78
HDAC3-215ENST00000519474 CYP26C1Q6V0L0 522 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 C15orf39Q6ZRI6 1047 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 HSCBQ8IWL3 235 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 ZDHHC14Q8IZN3 488 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 KREMEN2Q8NCW0 462 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 ZNF707Q96C28 371 aaPredicted RBP10.2□□□□□ -0.78
HDAC3-215ENST00000519474 RHOBTB2Q9BYZ6 727 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 IKZF4Q9H2S9 585 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 SFXN1Q9H9B4 322 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 SLC38A7Q9NVC3 462 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 USTQ9Y2C2 406 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 NR2E1Q9Y466 385 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 STYXL1Q9Y6J8 313 aa10.2□□□□□ -0.78
HDAC3-215ENST00000519474 TISP43B9A030 160 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 PODXLO00592 558 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 OGTO15294 1046 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 TRAPPC3O43617 180 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 PPP1R37O75864 691 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 F13A1P00488 732 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms