RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 TIMM22Q9Y584 194 aa12.1□□□□□ -0.47
SPIDR-211ENST00000519401 COL11A2P13942 1736 aaPredicted RBP12.09□□□□□ -0.47
SPIDR-211ENST00000519401 EYA2O00167 538 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 PODXLO00592 558 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 TIMM44O43615 452 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 KLRC4O43908 158 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 TRMUO75648 421 aaKnown RBP12.09□□□□□ -0.47
SPIDR-211ENST00000519401 CIAO1O76071 339 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 HOXD11P31277 338 aaPredicted RBP12.09□□□□□ -0.47
SPIDR-211ENST00000519401 LONP1P36776 959 aaKnown RBP12.09□□□□□ -0.47
SPIDR-211ENST00000519401 TRAPPC10P48553 1259 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 DNA2P51530 1060 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 HAND2P61296 217 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 TIMM10P62072 90 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 PPIDQ08752 370 aaKnown RBP12.09□□□□□ -0.47
SPIDR-211ENST00000519401 TDRD12Q587J7 1177 aaKnown RBP12.09□□□□□ -0.47
SPIDR-211ENST00000519401 ZNF449Q6P9G9 518 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 NET1Q7Z628 596 aaPredicted RBP12.09□□□□□ -0.47
SPIDR-211ENST00000519401 MGARPQ8TDB4 240 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 USP33Q8TEY7 942 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 C7orf43Q8WVR3 580 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 STARD8Q92502 1023 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 OSBP2Q969R2 916 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 HSPBAP1Q96EW2 488 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 SEMA4AQ9H3S1 761 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 C17orf75Q9HAS0 396 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 LY9Q9HBG7 655 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 PIM2Q9P1W9 311 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 FAF1Q9UNN5 650 aaPredicted RBP12.09□□□□□ -0.47
SPIDR-211ENST00000519401 KCNJ14Q9UNX9 436 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 PCDHB2Q9Y5E7 798 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 BRCA1P38398 1863 aaKnown RBP12.09□□□□□ -0.47
SPIDR-211ENST00000519401 SMIM23A6NLE4 172 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 FAM196BA6NMK8 535 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 EPHB6O15197 1021 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 GRIN3BO60391 1043 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 EXOC3O60645 756 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 FKBP6O75344 327 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 CBX6O95503 412 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 NTSR2O95665 410 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 IFIT1P09914 478 aaKnown RBP12.09□□□□□ -0.47
SPIDR-211ENST00000519401 ITGA4P13612 1032 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 HSPA6P17066 643 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 TRMT5Q32P41 509 aaKnown RBP12.09□□□□□ -0.47
SPIDR-211ENST00000519401 ERFEQ4G0M1 354 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 TMCO4Q5TGY1 634 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 ARL6IP4Q66PJ3 421 aaKnown RBP12.09□□□□□ -0.47
SPIDR-211ENST00000519401 AAGABQ6PD74 315 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 TPTE2Q6XPS3 522 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 ERI1Q8IV48 349 aaKnown RBP12.09□□□□□ -0.47
SPIDR-211ENST00000519401 OR6Y1Q8NGX8 325 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 CEP70Q8NHQ1 597 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 DDI1Q8WTU0 396 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 STAMQ92783 540 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 MCUR1Q96AQ8 359 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 PTCD3Q96EY7 689 aaKnown RBP12.09□□□□□ -0.47
SPIDR-211ENST00000519401 BTBD9Q96Q07 612 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 MRPS26Q9BYN8 205 aaKnown RBP12.09□□□□□ -0.47
SPIDR-211ENST00000519401 NACAP1Q9BZK3 213 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 RETREG1Q9H6L5 497 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 CLK4Q9HAZ1 481 aaKnown RBP12.09□□□□□ -0.47
SPIDR-211ENST00000519401 FAM207AQ9NSI2 230 aaPredicted RBP12.09□□□□□ -0.47
SPIDR-211ENST00000519401 TCP11L1Q9NUJ3 509 aa12.09□□□□□ -0.47
SPIDR-211ENST00000519401 DBR1Q9UK59 544 aaKnown RBP12.09□□□□□ -0.47
SPIDR-211ENST00000519401 PARNO95453 639 aaKnown RBP12.08□□□□□ -0.48
SPIDR-211ENST00000519401 OXSR1O95747 527 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-211ENST00000519401 SMIM18P0DKX4 95 aa12.08□□□□□ -0.48
SPIDR-211ENST00000519401 BRAFP15056 766 aa12.08□□□□□ -0.48
SPIDR-211ENST00000519401 TCIRG1Q13488 830 aa12.08□□□□□ -0.48
SPIDR-211ENST00000519401 PPP2R5BQ15173 497 aa12.08□□□□□ -0.48
SPIDR-211ENST00000519401 TAF1BQ53T94 588 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-211ENST00000519401 DALRD3Q5D0E6 543 aaKnown RBP12.08□□□□□ -0.48
SPIDR-211ENST00000519401 FAM91A1Q658Y4 838 aa12.08□□□□□ -0.48
SPIDR-211ENST00000519401 FAAH2Q6GMR7 532 aa12.08□□□□□ -0.48
SPIDR-211ENST00000519401 CLNKQ7Z7G1 428 aa12.08□□□□□ -0.48
SPIDR-211ENST00000519401 TTC39CQ8N584 583 aa12.08□□□□□ -0.48
SPIDR-211ENST00000519401 FBXO25Q8TCJ0 367 aa12.08□□□□□ -0.48
SPIDR-211ENST00000519401 SCFD1Q8WVM8 642 aa12.08□□□□□ -0.48
SPIDR-211ENST00000519401 SGF29Q96ES7 293 aa12.08□□□□□ -0.48
SPIDR-211ENST00000519401 ANKRD36BP1Q96IX9 119 aa12.08□□□□□ -0.48
SPIDR-211ENST00000519401 CELF4Q9BZC1 486 aaKnown RBP12.08□□□□□ -0.48
SPIDR-211ENST00000519401 UNKQ9C0B0 810 aaKnown RBP12.08□□□□□ -0.48
SPIDR-211ENST00000519401 MMRN2Q9H8L6 949 aa12.08□□□□□ -0.48
SPIDR-211ENST00000519401 GRHL1Q9NZI5 618 aa12.08□□□□□ -0.48
SPIDR-211ENST00000519401 PHTF1Q9UMS5 762 aa12.08□□□□□ -0.48
SPIDR-211ENST00000519401 SLC12A7Q9Y666 1083 aa12.08□□□□□ -0.48
SPIDR-211ENST00000519401 TNRC6CQ9HCJ0 1690 aaKnown RBP12.08□□□□□ -0.48
SPIDR-211ENST00000519401 ATAD5Q96QE3 1844 aa12.08□□□□□ -0.48
SPIDR-211ENST00000519401 H0YIN7 160 aa12.07□□□□□ -0.48
SPIDR-211ENST00000519401 GYG2O15488 501 aa12.07□□□□□ -0.48
SPIDR-211ENST00000519401 EDF1O60869 148 aaKnown RBP12.07□□□□□ -0.48
SPIDR-211ENST00000519401 OR6B1O95007 311 aa12.07□□□□□ -0.48
SPIDR-211ENST00000519401 TTLL1O95922 423 aa12.07□□□□□ -0.48
SPIDR-211ENST00000519401 COL6A2P12110 1019 aa12.07□□□□□ -0.48
SPIDR-211ENST00000519401 KRT2P35908 639 aa12.07□□□□□ -0.48
SPIDR-211ENST00000519401 PPARGP37231 505 aaPredicted RBP12.07□□□□□ -0.48
SPIDR-211ENST00000519401 PLTPP55058 493 aa12.07□□□□□ -0.48
SPIDR-211ENST00000519401 CYP4A11Q02928 519 aa12.07□□□□□ -0.48
SPIDR-211ENST00000519401 MAPK7Q13164 816 aa12.07□□□□□ -0.48
SPIDR-211ENST00000519401 LRRC24Q50LG9 513 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms