RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 CLLU1OSQ5K130 101 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 HERC6Q8IVU3 1022 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 LRRC43Q8N309 656 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 GSTCDQ8NEC7 633 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 LPPQ93052 612 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 CCDC127Q96BQ5 260 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 FAM212AQ96EL1 285 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 KIF12Q96FN5 646 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 ANKRD36BP1Q96IX9 119 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 CASD1Q96PB1 797 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 PPP1R10Q96QC0 940 aaKnown RBP10.26□□□□□ -0.77
CLN8-203ENST00000518780 TMEM175Q9BSA9 504 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 ZBED2Q9BTP6 218 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 PDE11AQ9HCR9 933 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 SAMSN1Q9NSI8 373 aaKnown RBP10.26□□□□□ -0.77
CLN8-203ENST00000518780 RNF19AQ9NV58 838 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 INTS13Q9NVM9 706 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 CXXC1Q9P0U4 656 aaPredicted RBP10.26□□□□□ -0.77
CLN8-203ENST00000518780 STK39Q9UEW8 545 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 LIMA1Q9UHB6 759 aaKnown RBP10.26□□□□□ -0.77
CLN8-203ENST00000518780 R3HCC1Q9Y3T6 440 aaKnown RBP10.26□□□□□ -0.77
CLN8-203ENST00000518780 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.25□□□□□ -0.77
CLN8-203ENST00000518780 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.25□□□□□ -0.77
CLN8-203ENST00000518780 GTPBP10A4D1E9 387 aaKnown RBP10.25□□□□□ -0.77
CLN8-203ENST00000518780 LRRIQ3A6PVS8 624 aaPredicted RBP10.25□□□□□ -0.77
CLN8-203ENST00000518780 PTGESO14684 152 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 UPP2O95045 317 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 AFPP02771 609 aaKnown RBP10.25□□□□□ -0.77
CLN8-203ENST00000518780 TMEM191BP0C7N4 346 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 ATXN8OSP0DMR3 200 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 DLATP10515 647 aaKnown RBP10.25□□□□□ -0.77
CLN8-203ENST00000518780 FGFR1P11362 822 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 LRPAP1P30533 357 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 PNPLA4P41247 253 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 TFAMQ00059 246 aaKnown RBP10.25□□□□□ -0.77
CLN8-203ENST00000518780 RNASELQ05823 741 aaKnown RBP10.25□□□□□ -0.77
CLN8-203ENST00000518780 DSC1Q08554 894 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 TUSC3Q13454 348 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 SHHQ15465 462 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 KRT39Q6A163 491 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 JADE1Q6IE81 842 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 LUZP1Q86V48 1076 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 TDHQ8IZJ6 230 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 ZSWIM2Q8NEG5 633 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 HELQQ8TDG4 1101 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 SLC35C1Q96A29 364 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 EEF2KMTQ96G04 330 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 FAXDC2Q96IV6 333 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 ZFP42Q96MM3 310 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 FAM193BQ96PV7 902 aaPredicted RBP10.25□□□□□ -0.77
CLN8-203ENST00000518780 YME1L1Q96TA2 773 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 TUBGCP2Q9BSJ2 902 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 RC3H2Q9HBD1 1191 aaKnown RBP10.25□□□□□ -0.77
CLN8-203ENST00000518780 TMEM8AQ9HCN3 771 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 AAASQ9NRG9 546 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 KLK14Q9P0G3 267 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 ITGA11Q9UKX5 1188 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 RWDD3Q9Y3V2 267 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 ALPK3Q96L96 1907 aa10.25□□□□□ -0.77
CLN8-203ENST00000518780 TBKBP1A7MCY6 615 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 MEIS3P2A8K0S8 358 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 MEFVO15553 781 aaPredicted RBP10.24□□□□□ -0.77
CLN8-203ENST00000518780 TLL1O43897 1013 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 STAU1O95793 577 aaKnown RBP10.24□□□□□ -0.77
CLN8-203ENST00000518780 C4BPAP04003 597 aaKnown RBP10.24□□□□□ -0.77
CLN8-203ENST00000518780 ALDH2P05091 517 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 TPM3P06753 285 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 ATICP31939 592 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 SCNN1GP51170 649 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 RBP5P82980 135 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 KCNH2Q12809 1159 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 BTG3Q14201 252 aaPredicted RBP10.24□□□□□ -0.77
CLN8-203ENST00000518780 NAB2Q15742 525 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 ZACNQ401N2 412 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 FILIP1LQ4L180 1135 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 VWA3BQ502W6 1294 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 DCAF17Q5H9S7 520 aaPredicted RBP10.24□□□□□ -0.77
CLN8-203ENST00000518780 C9orf50Q5SZB4 431 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 TCERG1LQ5VWI1 586 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 DCLRE1AQ6PJP8 1040 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 C15orf39Q6ZRI6 1047 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 SV2AQ7L0J3 742 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 TRAPPC11Q7Z392 1133 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 CREBRFQ8IUR6 639 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 FIBCD1Q8N539 461 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 LRRC52Q8N7C0 313 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 SP7Q8TDD2 431 aaPredicted RBP10.24□□□□□ -0.77
CLN8-203ENST00000518780 TAF4BQ92750 862 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 ZMAT2Q96NC0 199 aaKnown RBP10.24□□□□□ -0.77
CLN8-203ENST00000518780 HSD3B7Q9H2F3 369 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 PRO3102Q9H379 93 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 NDST4Q9H3R1 872 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 TBC1D13Q9NVG8 400 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 DPP3Q9NY33 737 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 INPP5FQ9Y2H2 1132 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 COQ4Q9Y3A0 265 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 PCDHA11Q9Y5I1 949 aa10.24□□□□□ -0.77
CLN8-203ENST00000518780 MKI67P46013 3256 aaKnown RBP10.24□□□□□ -0.77
CLN8-203ENST00000518780 TTC3P53804 2025 aa10.23□□□□□ -0.77
CLN8-203ENST00000518780 ANO9A1A5B4 782 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms