RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 RNF168Q8IYW5 571 aaPredicted RBP20.36■□□□□ 0.85
FAM49B-208ENST00000518344 CEP57L1Q8IYX8 460 aa20.36■□□□□ 0.85
FAM49B-208ENST00000518344 C18orf25Q96B23 403 aaPredicted RBP20.36■□□□□ 0.85
FAM49B-208ENST00000518344 UROC1Q96N76 676 aa20.36■□□□□ 0.85
FAM49B-208ENST00000518344 PYM1Q9BRP8 204 aaKnown RBP20.36■□□□□ 0.85
FAM49B-208ENST00000518344 APOL5Q9BWW9 433 aa20.36■□□□□ 0.85
FAM49B-208ENST00000518344 STRA6Q9BX79 667 aa20.36■□□□□ 0.85
FAM49B-208ENST00000518344 SCAND2PQ9GZW5 306 aaPredicted RBP20.36■□□□□ 0.85
FAM49B-208ENST00000518344 MAGEF1Q9HAY2 307 aa20.36■□□□□ 0.85
FAM49B-208ENST00000518344 OLFML3Q9NRN5 406 aa20.36■□□□□ 0.85
FAM49B-208ENST00000518344 CHST7Q9NS84 486 aa20.36■□□□□ 0.85
FAM49B-208ENST00000518344 MYH11P35749 1972 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 A0A0B4J269 797 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 PPP1R37O75864 691 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 B3GAT3O94766 335 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 EPCAMP16422 314 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 CMA1P23946 247 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 IGFBP6P24592 240 aaPredicted RBP20.35■□□□□ 0.85
FAM49B-208ENST00000518344 AFMP43652 599 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 CASP5P51878 434 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 NUCB2P80303 420 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 SOX4Q06945 474 aaPredicted RBP20.35■□□□□ 0.85
FAM49B-208ENST00000518344 UPP1Q16831 310 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 L1TD1Q5T7N2 865 aaKnown RBP20.35■□□□□ 0.85
FAM49B-208ENST00000518344 FAM171A1Q5VUB5 890 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 PPFIBP1Q86W92 1011 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 SYCP3Q8IZU3 236 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 RIN2Q8WYP3 895 aaPredicted RBP20.35■□□□□ 0.85
FAM49B-208ENST00000518344 HPS3Q969F9 1004 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 FAM212AQ96EL1 285 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 C7orf25Q9BPX7 421 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 FGFBP2Q9BYJ0 223 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 BLZF1Q9H2G9 400 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 RPF1Q9H9Y2 349 aaKnown RBP20.35■□□□□ 0.85
FAM49B-208ENST00000518344 PLEKHA5Q9HAU0 1116 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 GDPD2Q9HCC8 539 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 SERTAD1Q9UHV2 236 aa20.35■□□□□ 0.85
FAM49B-208ENST00000518344 TDRD15B5MCY1 1934 aaKnown RBP20.34■□□□□ 0.85
FAM49B-208ENST00000518344 LACTBL1A8MY62 500 aa20.34■□□□□ 0.85
FAM49B-208ENST00000518344 TNFRSF10AO00220 468 aa20.34■□□□□ 0.85
FAM49B-208ENST00000518344 TEX28O15482 410 aa20.34■□□□□ 0.85
FAM49B-208ENST00000518344 PRPF6O94906 941 aaKnown RBP20.34■□□□□ 0.85
FAM49B-208ENST00000518344 PFKFB1P16118 471 aa20.34■□□□□ 0.85
FAM49B-208ENST00000518344 CASP1P29466 404 aa20.34■□□□□ 0.85
FAM49B-208ENST00000518344 PPP2R3AQ06190 1150 aa20.34■□□□□ 0.85
FAM49B-208ENST00000518344 ALCAMQ13740 583 aa20.34■□□□□ 0.85
FAM49B-208ENST00000518344 SMAD2Q15796 467 aaKnown RBP20.34■□□□□ 0.85
FAM49B-208ENST00000518344 ENOX2Q16206 610 aaKnown RBP20.34■□□□□ 0.85
FAM49B-208ENST00000518344 SMRP1Q8NCR6 262 aa20.34■□□□□ 0.85
FAM49B-208ENST00000518344 POMGNT1Q8WZA1 660 aa20.34■□□□□ 0.85
FAM49B-208ENST00000518344 DDX27Q96GQ7 796 aaKnown RBP20.34■□□□□ 0.85
FAM49B-208ENST00000518344 AGO2Q9UKV8 859 aaKnown RBP20.34■□□□□ 0.85
FAM49B-208ENST00000518344 TTC26A0AVF1 554 aa20.33■□□□□ 0.85
FAM49B-208ENST00000518344 SPDYE4A6NLX3 237 aa20.33■□□□□ 0.85
FAM49B-208ENST00000518344 TULP1O00294 542 aaPredicted RBP20.33■□□□□ 0.85
FAM49B-208ENST00000518344 PODXLO00592 558 aa20.33■□□□□ 0.85
FAM49B-208ENST00000518344 FAM189A1O60320 539 aa20.33■□□□□ 0.85
FAM49B-208ENST00000518344 HOXB8P17481 243 aaPredicted RBP20.33■□□□□ 0.85
FAM49B-208ENST00000518344 ACOT2P49753 483 aa20.33■□□□□ 0.85
FAM49B-208ENST00000518344 ELAVL2Q12926 359 aaKnown RBP20.33■□□□□ 0.85
FAM49B-208ENST00000518344 RTP2Q5QGT7 225 aa20.33■□□□□ 0.85
FAM49B-208ENST00000518344 SYCE2Q6PIF2 218 aa20.33■□□□□ 0.85
FAM49B-208ENST00000518344 GLYCTKQ8IVS8 523 aa20.33■□□□□ 0.85
FAM49B-208ENST00000518344 GRAMD1CQ8IYS0 662 aa20.33■□□□□ 0.85
FAM49B-208ENST00000518344 SLC22A17Q8WUG5 538 aa20.33■□□□□ 0.85
FAM49B-208ENST00000518344 KIF12Q96FN5 646 aa20.33■□□□□ 0.85
FAM49B-208ENST00000518344 TTPALQ9BTX7 342 aa20.33■□□□□ 0.85
FAM49B-208ENST00000518344 RXFP1Q9HBX9 757 aa20.33■□□□□ 0.85
FAM49B-208ENST00000518344 USP15Q9Y4E8 981 aaPredicted RBP20.33■□□□□ 0.85
FAM49B-208ENST00000518344 STYXL1Q9Y6J8 313 aa20.33■□□□□ 0.85
FAM49B-208ENST00000518344 I3L4J1 428 aa20.32■□□□□ 0.84
FAM49B-208ENST00000518344 ADH1AP07327 375 aa20.32■□□□□ 0.84
FAM49B-208ENST00000518344 SLFN14P0C7P3 912 aa20.32■□□□□ 0.84
FAM49B-208ENST00000518344 RPL17P18621 184 aaKnown RBP20.32■□□□□ 0.84
FAM49B-208ENST00000518344 RPL9P32969 192 aaKnown RBP20.32■□□□□ 0.84
FAM49B-208ENST00000518344 CLCN4P51793 760 aa20.32■□□□□ 0.84
FAM49B-208ENST00000518344 CUL4BQ13620 913 aa20.32■□□□□ 0.84
FAM49B-208ENST00000518344 POSTNQ15063 836 aa20.32■□□□□ 0.84
FAM49B-208ENST00000518344 CNNM4Q6P4Q7 775 aa20.32■□□□□ 0.84
FAM49B-208ENST00000518344 PRSS55Q6UWB4 352 aaPredicted RBP20.32■□□□□ 0.84
FAM49B-208ENST00000518344 STXBP4Q6ZWJ1 553 aa20.32■□□□□ 0.84
FAM49B-208ENST00000518344 C12orf76Q8N812 135 aaPredicted RBP20.32■□□□□ 0.84
FAM49B-208ENST00000518344 C3orf58Q8NDZ4 430 aa20.32■□□□□ 0.84
FAM49B-208ENST00000518344 S1PR5Q9H228 398 aa20.32■□□□□ 0.84
FAM49B-208ENST00000518344 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.32■□□□□ 0.84
FAM49B-208ENST00000518344 TUBGCP4Q9UGJ1 667 aa20.32■□□□□ 0.84
FAM49B-208ENST00000518344 CPSF3Q9UKF6 684 aaKnown RBP20.32■□□□□ 0.84
FAM49B-208ENST00000518344 TCF20Q9UGU0 1960 aaKnown RBP20.32■□□□□ 0.84
FAM49B-208ENST00000518344 TMEM189-UBE2V1I3L0A0 370 aa20.31■□□□□ 0.84
FAM49B-208ENST00000518344 TRAPPC3O43617 180 aa20.31■□□□□ 0.84
FAM49B-208ENST00000518344 ACTN4O43707 911 aaKnown RBP20.31■□□□□ 0.84
FAM49B-208ENST00000518344 ADSSP30520 456 aa20.31■□□□□ 0.84
FAM49B-208ENST00000518344 SSTR3P32745 418 aaPredicted RBP20.31■□□□□ 0.84
FAM49B-208ENST00000518344 SYKP43405 635 aa20.31■□□□□ 0.84
FAM49B-208ENST00000518344 BRCC3P46736 316 aa20.31■□□□□ 0.84
FAM49B-208ENST00000518344 RARS2Q5T160 578 aaKnown RBP20.31■□□□□ 0.84
FAM49B-208ENST00000518344 CD300LGQ6UXG3 332 aa20.31■□□□□ 0.84
FAM49B-208ENST00000518344 UNC13DQ70J99 1090 aa20.31■□□□□ 0.84
FAM49B-208ENST00000518344 PALB2Q86YC2 1186 aa20.31■□□□□ 0.84
FAM49B-208ENST00000518344 GLIS3Q8NEA6 775 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms