RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 FAM114A2Q9NRY5 505 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 SAMSN1Q9NSI8 373 aaKnown RBP5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 GINM1Q9NU53 330 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 ATAD3AQ9NVI7 634 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 MKS1Q9NXB0 559 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 RCOR1Q9UKL0 485 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 ACAD8Q9UKU7 415 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 ASAP1Q9ULH1 1129 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 CTNND2Q9UQB3 1225 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 MRPL11Q9Y3B7 192 aaKnown RBP5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 HBS1LQ9Y450 684 aaKnown RBP5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 GAKO14976 1311 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 PLEKHG1Q9ULL1 1385 aa5.15□□□□□ -1.59
HMGB1P19-201ENST00000517578 NOS1P29475 1434 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 IFT140Q96RY7 1462 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 IQGAP2Q13576 1575 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 A0A1B0GVG6 124 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 GOLGA8BA8MQT2 603 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 PSMD14O00487 310 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 NDC80O14777 642 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 FANCGO15287 622 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 NVLO15381 856 aaKnown RBP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 ORC4O43929 436 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 PDE5AO76074 875 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 STAMBPO95630 424 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 SLC3A2P08195 630 aaKnown RBP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 ZNF12P17014 697 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 ZKSCAN1P17029 563 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 GNAZP19086 355 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 NFKBIAP25963 317 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 HMOX2P30519 316 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 CSTF2P33240 577 aaKnown RBP eCLIP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 SERPINB6P35237 376 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 GNL1P36915 607 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 HALP42357 657 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 PAFAH1B1P43034 410 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 PIP4K2AP48426 406 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 CLCN7P51798 805 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 EIF3BP55884 814 aaKnown RBP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 GJA9P57773 515 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 RPS26P62854 115 aaKnown RBP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 NOP14P78316 857 aaKnown RBP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 KRT83P78385 493 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 TMEM62Q0P6H9 643 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 HSPA14Q0VDF9 509 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 WASHC5Q12768 1159 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 TRAP1Q12931 704 aaKnown RBP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 TBX2Q13207 712 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 DNAJC3Q13217 504 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 DPYSQ14117 519 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 TNIP1Q15025 636 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 RASA2Q15283 850 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 ME3Q16798 604 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 SYDE2Q5VT97 1194 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 AGAP9Q5VTM2 703 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 FYB2Q5VWT5 728 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 PAPD7Q5XG87 772 aaKnown RBP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 SLC2A7Q6PXP3 512 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 SLC4A10Q6U841 1118 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 C11orf57Q6ZUT1 292 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 RUFY3Q7L099 469 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 TRPM8Q7Z2W7 1104 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 PCGF5Q86SE9 256 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 TBC1D1Q86TI0 1168 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 RELL1Q8IUW5 271 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 NUP93Q8N1F7 819 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 CHCHD4Q8N4Q1 142 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 PAF1Q8N7H5 531 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 ENDOVQ8N8Q3 282 aaKnown RBP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 BBOF1Q8ND07 529 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 TOR1AIP2Q8NFQ8 470 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 ABTB1Q969K4 478 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 C8orf76Q96K31 380 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 SCYL1Q96KG9 808 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 FAM84AQ96KN4 292 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 C8orf48Q96LL4 319 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 TTC1Q99614 292 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 AIFM2Q9BRQ8 373 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 UQCC2Q9BRT2 126 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 NOC4LQ9BVI4 516 aaKnown RBP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 FAM129AQ9BZQ8 928 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 IMPG2Q9BZV3 1241 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 NDEL1Q9GZM8 345 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 C10orf88Q9H8K7 445 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 SLC38A10Q9HBR0 1119 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 PPANQ9NQ55 473 aaKnown RBP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 CNGB3Q9NQW8 809 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 ARHGEF3Q9NR81 526 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 TXLNGQ9NUQ3 528 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 SEPT11Q9NVA2 429 aaKnown RBP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 PANK4Q9NVE7 773 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 GID8Q9NWU2 228 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 DCAF16Q9NXF7 216 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 CHPF2Q9P2E5 772 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 RASAL2Q9UJF2 1139 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 ZNF180Q9UJW8 692 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 GIT1Q9Y2X7 761 aa5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 NOSIPQ9Y314 301 aaKnown RBP5.14□□□□□ -1.59
HMGB1P19-201ENST00000517578 ZNF711Q9Y462 761 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms