RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 LRP11Q86VZ4 500 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 KIAA0825Q8IV33 1275 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 KLHDC8BQ8IXV7 354 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 CMTM4Q8IZR5 234 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 MMP21Q8N119 569 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 BCL6BQ8N143 479 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 FAM43AQ8N2R8 423 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 TMEM132CQ8N3T6 1108 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 KIR2DL5BQ8NHK3 375 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 BRF1Q92994 677 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 NACC2Q96BF6 587 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ZNF689Q96CS4 500 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 RTP4Q96DX8 246 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 FBXO17Q96EF6 278 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PHF21BQ96EK2 531 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 SCMH1Q96GD3 660 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 SLC6A18Q96N87 628 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 BTBD2Q9BX70 525 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 TM6SF1Q9BZW5 370 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 NKX2-4Q9H2Z4 354 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ABHD16BQ9H3Z7 469 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 EPB41L1Q9H4G0 881 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 NOL6Q9H6R4 1146 aaKnown RBP-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 TMEM8AQ9HCN3 771 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 INCENPQ9NQS7 918 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 CCDC87Q9NVE4 849 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 NLRP2Q9NX02 1062 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 GMIPQ9P107 970 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 NYAP2Q9P242 653 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 SEPT3Q9UH03 358 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 TIMM13Q9Y5L4 95 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 RNF215Q9Y6U7 377 aa-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ZNF469Q96JG9 3925 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-1238P-201ENST00000517215 FRMPD2Q68DX3 1309 aaPredicted RBP-0.35□□□□□ -2.46
RNU6-1238P-201ENST00000517215 HELZ2Q9BYK8 2649 aaKnown RBP-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 IGLV5-39A0A0G2JS06 123 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KIR2DS1A0A191URI9 304 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SRRM4A7MD48 611 aaKnown RBP-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PRR5-ARHGAP8B1AHC4 643 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZNF814B7Z6K7 855 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SMIM22K7EJ46 135 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SLC27A2O14975 620 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MTSS1O43312 755 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PROM1O43490 865 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 BUB3O43684 328 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TLR2O60603 784 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FAM13AO94988 1023 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PPP1R3DO95685 299 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 BPNT1O95861 308 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 IGKV3-15P01624 115 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 C4BPAP04003 597 aaKnown RBP-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 IGKV3-11P04433 115 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ELANEP08246 267 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 F7P08709 466 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ACAA1P09110 424 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 RBP3P10745 1247 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ITGA4P13612 1032 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PLS3P13797 630 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 GATA1P15976 413 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 UBTFP17480 764 aaKnown RBP-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PTGS1P23219 599 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MGAT1P26572 445 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 HSD17B4P51659 736 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 VAV2P52735 878 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CXADRP78310 365 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ACSM2AQ08AH3 577 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 DMP1Q13316 513 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TUSC3Q13454 348 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MTMR3Q13615 1198 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KIR2DS1Q14954 304 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SHBQ15464 509 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SHHQ15465 462 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 INF2Q27J81 1249 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 AASDHQ4L235 1098 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 WASHC2DQ5SRD0 308 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 EGFLAMQ63HQ2 1017 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 METRNLQ641Q3 311 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ICE2Q659A1 982 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 DCAF15Q66K64 600 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 VWA1Q6PCB0 445 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 LIN28BQ6ZN17 250 aaKnown RBP eCLIP-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KRT26Q7Z3Y9 468 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CDC20BQ86Y33 519 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MAPKAPK5Q8IW41 473 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SFTPA1Q8IWL2 248 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 IFNL3Q8IZI9 196 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 LMNTD1Q8N9Z9 388 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 OR10H5Q8NGA6 315 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TAS1R2Q8TE23 839 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TFAP2BQ92481 460 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 HIC2Q96JB3 615 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ASB2Q96Q27 587 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TUBB6Q9BUF5 446 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CDK19Q9BWU1 502 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 BARHL1Q9BZE3 327 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ENKD1Q9H0I2 346 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 WDR13Q9H1Z4 485 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 OR10A5Q9H207 317 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KDM4CQ9H3R0 1056 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 RETREG1Q9H6L5 497 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms