RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 HDAC5Q9UQL6 1122 aa4.66□□□□□ -1.66
CAST-242ENST00000515063 ATP7BP35670 1465 aa4.66□□□□□ -1.66
CAST-242ENST00000515063 ARHGEF40Q8TER5 1519 aa4.66□□□□□ -1.66
CAST-242ENST00000515063 PNPLA6Q8IY17 1366 aa4.65□□□□□ -1.66
CAST-242ENST00000515063 YEATS2Q9ULM3 1422 aa4.65□□□□□ -1.66
CAST-242ENST00000515063 COL3A1P02461 1466 aaPredicted RBP4.65□□□□□ -1.66
CAST-242ENST00000515063 ANKRD62A6NC57 917 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 NEMP1O14524 444 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 PPM1GO15355 546 aaPredicted RBP4.65□□□□□ -1.67
CAST-242ENST00000515063 PLIN1O60240 522 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 PRAMEF4O60810 478 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 RECQL4O94761 1208 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 MTHFD2P13995 350 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 CNGA1P29973 690 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 PTGS2P35354 604 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 GZMKP49863 264 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 MTHFSP49914 203 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 SCNN1GP51170 649 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 UGT8Q16880 541 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 NAIF1Q69YI7 327 aaPredicted RBP4.65□□□□□ -1.67
CAST-242ENST00000515063 FAM180AQ6UWF9 173 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 Q6ZRM9 215 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 HTR3DQ70Z44 454 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 FAM83AQ86UY5 434 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 ZFPM1Q8IX07 1006 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 ELOA2Q8IYF1 753 aaPredicted RBP4.65□□□□□ -1.67
CAST-242ENST00000515063 AMER2Q8N7J2 671 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 MNTQ99583 582 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 FDXACB1Q9BRP7 624 aaPredicted RBP4.65□□□□□ -1.67
CAST-242ENST00000515063 MRIQ9BWK5 157 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 PCED1AQ9H1Q7 454 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 MS4A5Q9H3V2 200 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 MYH16Q9H6N6 1097 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 CEP72Q9P209 647 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.65□□□□□ -1.67
CAST-242ENST00000515063 REXO2Q9Y3B8 237 aaKnown RBP4.65□□□□□ -1.67
CAST-242ENST00000515063 CDY2AQ9Y6F7 541 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 MAPK8IP3Q9UPT6 1336 aa4.65□□□□□ -1.67
CAST-242ENST00000515063 A2ML1A8K2U0 1454 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 NLRP1Q9C000 1473 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 PLSCR1O15162 318 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 HOXA3O43365 443 aaPredicted RBP4.64□□□□□ -1.67
CAST-242ENST00000515063 NARSO43776 548 aaKnown RBP4.64□□□□□ -1.67
CAST-242ENST00000515063 PHF2O75151 1096 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 GASTP01350 101 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 CLEC2LP0C7M8 214 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 HSP90B1P14625 803 aaKnown RBP4.64□□□□□ -1.67
CAST-242ENST00000515063 ENPP1P22413 925 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 RABGGTBP53611 331 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 RARSP54136 660 aaKnown RBP4.64□□□□□ -1.67
CAST-242ENST00000515063 TGFB2P61812 414 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 DGCR2P98153 550 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 MRPL49Q13405 166 aaKnown RBP4.64□□□□□ -1.67
CAST-242ENST00000515063 FHL2Q14192 279 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 C19orf54Q5BKX5 351 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 RABL3Q5HYI8 236 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 PITRM1Q5JRX3 1037 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 C20orf194Q5TEA3 1177 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 IQSEC1Q6DN90 963 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 PDZD4Q76G19 769 aaPredicted RBP4.64□□□□□ -1.67
CAST-242ENST00000515063 DOK3Q7L591 496 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 CCDC146Q8IYE0 955 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 SYNE4Q8N205 404 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 TCP11L2Q8N4U5 519 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.64□□□□□ -1.67
CAST-242ENST00000515063 FAM193BQ96PV7 902 aaPredicted RBP4.64□□□□□ -1.67
CAST-242ENST00000515063 CDC5LQ99459 802 aaKnown RBP4.64□□□□□ -1.67
CAST-242ENST00000515063 CPPED1Q9BRF8 314 aaPredicted RBP4.64□□□□□ -1.67
CAST-242ENST00000515063 ENKD1Q9H0I2 346 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 KCTD10Q9H3F6 313 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 EVLQ9UI08 416 aaPredicted RBP4.64□□□□□ -1.67
CAST-242ENST00000515063 A0A1W2PP64 1363 aa4.64□□□□□ -1.67
CAST-242ENST00000515063 CD163L1Q9NR16 1453 aa4.63□□□□□ -1.67
CAST-242ENST00000515063 KLRG2A4D1S0 409 aaPredicted RBP4.63□□□□□ -1.67
CAST-242ENST00000515063 LCHNA4D1U4 455 aa4.63□□□□□ -1.67
CAST-242ENST00000515063 PRR5-ARHGAP8B1AHC4 643 aa4.63□□□□□ -1.67
CAST-242ENST00000515063 TRIM24O15164 1050 aa4.63□□□□□ -1.67
CAST-242ENST00000515063 CASRP41180 1078 aa4.63□□□□□ -1.67
CAST-242ENST00000515063 MASP1P48740 699 aa4.63□□□□□ -1.67
CAST-242ENST00000515063 LGALS4P56470 323 aa4.63□□□□□ -1.67
CAST-242ENST00000515063 PURAQ00577 322 aaKnown RBP4.63□□□□□ -1.67
CAST-242ENST00000515063 TRIM25Q14258 630 aaKnown RBP4.63□□□□□ -1.67
CAST-242ENST00000515063 UBE3CQ15386 1083 aa4.63□□□□□ -1.67
CAST-242ENST00000515063 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.63□□□□□ -1.67
CAST-242ENST00000515063 CLRN3Q8NCR9 226 aa4.63□□□□□ -1.67
CAST-242ENST00000515063 SLC25A43Q8WUT9 341 aaPredicted RBP4.63□□□□□ -1.67
CAST-242ENST00000515063 SNX33Q8WV41 574 aa4.63□□□□□ -1.67
CAST-242ENST00000515063 TOPORSQ9NS56 1045 aaPredicted RBP4.63□□□□□ -1.67
CAST-242ENST00000515063 TMPRSS11EQ9UL52 423 aa4.63□□□□□ -1.67
CAST-242ENST00000515063 ZBTB21Q9ULJ3 1066 aa4.63□□□□□ -1.67
CAST-242ENST00000515063 XDHP47989 1333 aa4.63□□□□□ -1.67
CAST-242ENST00000515063 WDR33Q9C0J8 1336 aaKnown RBP4.63□□□□□ -1.67
CAST-242ENST00000515063 AATKQ6ZMQ8 1374 aa4.63□□□□□ -1.67
CAST-242ENST00000515063 MON2Q7Z3U7 1717 aa4.63□□□□□ -1.67
CAST-242ENST00000515063 AKAP12Q02952 1782 aa4.63□□□□□ -1.67
CAST-242ENST00000515063 TECPR2O15040 1411 aa4.63□□□□□ -1.67
CAST-242ENST00000515063 FAM135BQ49AJ0 1406 aa4.63□□□□□ -1.67
CAST-242ENST00000515063 PPIP5K1Q6PFW1 1433 aa4.63□□□□□ -1.67
CAST-242ENST00000515063 RIMS2Q9UQ26 1411 aa4.63□□□□□ -1.67
CAST-242ENST00000515063 MAP2P11137 1827 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms