RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 PSMD5Q16401 504 aa26.76■■□□□ 1.87
SNF8-213ENST00000514929 CCDC73Q6ZRK6 1079 aa26.76■■□□□ 1.87
SNF8-213ENST00000514929 SPATA31D4Q6ZUB0 917 aa26.76■■□□□ 1.87
SNF8-213ENST00000514929 SV2BQ7L1I2 683 aa26.76■■□□□ 1.87
SNF8-213ENST00000514929 DYMQ7RTS9 669 aa26.76■■□□□ 1.87
SNF8-213ENST00000514929 PIK3R5Q8WYR1 880 aa26.76■■□□□ 1.87
SNF8-213ENST00000514929 DDX27Q96GQ7 796 aaKnown RBP26.76■■□□□ 1.87
SNF8-213ENST00000514929 ZMAT2Q96NC0 199 aaKnown RBP26.76■■□□□ 1.87
SNF8-213ENST00000514929 PRR33A8MZF0 331 aa26.75■■□□□ 1.87
SNF8-213ENST00000514929 TGM5O43548 720 aa26.75■■□□□ 1.87
SNF8-213ENST00000514929 TRAPPC3O43617 180 aa26.75■■□□□ 1.87
SNF8-213ENST00000514929 C1RP00736 705 aa26.75■■□□□ 1.87
SNF8-213ENST00000514929 PDIA4P13667 645 aaKnown RBP26.75■■□□□ 1.87
SNF8-213ENST00000514929 ABCD1P33897 745 aa26.75■■□□□ 1.87
SNF8-213ENST00000514929 SOX4Q06945 474 aaPredicted RBP26.75■■□□□ 1.87
SNF8-213ENST00000514929 PDXDC1Q6P996 788 aa26.75■■□□□ 1.87
SNF8-213ENST00000514929 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.75■■□□□ 1.87
SNF8-213ENST00000514929 C15orf39Q6ZRI6 1047 aa26.75■■□□□ 1.87
SNF8-213ENST00000514929 LINC00301Q8NCQ3 95 aa26.75■■□□□ 1.87
SNF8-213ENST00000514929 FEZF2Q8TBJ5 459 aa26.75■■□□□ 1.87
SNF8-213ENST00000514929 HDAC7Q8WUI4 952 aa26.75■■□□□ 1.87
SNF8-213ENST00000514929 TFIP11Q9UBB9 837 aaKnown RBP26.75■■□□□ 1.87
SNF8-213ENST00000514929 CITO14578 2027 aa26.75■■□□□ 1.87
SNF8-213ENST00000514929 IGFBP6P24592 240 aaPredicted RBP26.74■■□□□ 1.87
SNF8-213ENST00000514929 NMT1P30419 496 aaKnown RBP26.74■■□□□ 1.87
SNF8-213ENST00000514929 STAT6P42226 847 aa26.74■■□□□ 1.87
SNF8-213ENST00000514929 SLC10A6Q3KNW5 377 aa26.74■■□□□ 1.87
SNF8-213ENST00000514929 CMASQ8NFW8 434 aaPredicted RBP26.74■■□□□ 1.87
SNF8-213ENST00000514929 LNX1Q8TBB1 728 aaPredicted RBP26.74■■□□□ 1.87
SNF8-213ENST00000514929 EDAQ92838 391 aa26.74■■□□□ 1.87
SNF8-213ENST00000514929 PANK2Q9BZ23 570 aa26.74■■□□□ 1.87
SNF8-213ENST00000514929 HAPLN2Q9GZV7 340 aa26.74■■□□□ 1.87
SNF8-213ENST00000514929 PLEKHA4Q9H4M7 779 aa26.74■■□□□ 1.87
SNF8-213ENST00000514929 MYH15Q9Y2K3 1946 aa26.74■■□□□ 1.87
SNF8-213ENST00000514929 CCDC195A0A1B0GUA6 201 aa26.73■■□□□ 1.87
SNF8-213ENST00000514929 C2CD4DB7Z1M9 353 aa26.73■■□□□ 1.87
SNF8-213ENST00000514929 PODXLO00592 558 aa26.73■■□□□ 1.87
SNF8-213ENST00000514929 SPTLC2O15270 562 aa26.73■■□□□ 1.87
SNF8-213ENST00000514929 PIGRP01833 764 aa26.73■■□□□ 1.87
SNF8-213ENST00000514929 CLTAP09496 248 aa26.73■■□□□ 1.87
SNF8-213ENST00000514929 CCDC149Q6ZUS6 474 aa26.73■■□□□ 1.87
SNF8-213ENST00000514929 TDRD5Q8NAT2 981 aaKnown RBP26.73■■□□□ 1.87
SNF8-213ENST00000514929 SPRYD3Q8NCJ5 442 aa26.73■■□□□ 1.87
SNF8-213ENST00000514929 C3orf58Q8NDZ4 430 aa26.73■■□□□ 1.87
SNF8-213ENST00000514929 DDX12PQ92771 950 aa26.73■■□□□ 1.87
SNF8-213ENST00000514929 C18orf25Q96B23 403 aaPredicted RBP26.73■■□□□ 1.87
SNF8-213ENST00000514929 FIZ1Q96SL8 496 aa26.73■■□□□ 1.87
SNF8-213ENST00000514929 RAPGEFL1Q9UHV5 662 aa26.73■■□□□ 1.87
SNF8-213ENST00000514929 I3L4J1 428 aa26.72■■□□□ 1.87
SNF8-213ENST00000514929 MEFVO15553 781 aaPredicted RBP26.72■■□□□ 1.87
SNF8-213ENST00000514929 RFPL2O75678 378 aa26.72■■□□□ 1.87
SNF8-213ENST00000514929 ZSCAN22P10073 491 aaPredicted RBP26.72■■□□□ 1.87
SNF8-213ENST00000514929 CXCL8P10145 99 aa26.72■■□□□ 1.87
SNF8-213ENST00000514929 FGFR3P22607 806 aa26.72■■□□□ 1.87
SNF8-213ENST00000514929 GTF2BQ00403 316 aa26.72■■□□□ 1.87
SNF8-213ENST00000514929 KYAT1Q16773 422 aa26.72■■□□□ 1.87
SNF8-213ENST00000514929 LILRA6Q6PI73 481 aa26.72■■□□□ 1.87
SNF8-213ENST00000514929 SFR1Q86XK3 245 aa26.72■■□□□ 1.87
SNF8-213ENST00000514929 MAP4K3Q8IVH8 894 aa26.72■■□□□ 1.87
SNF8-213ENST00000514929 KREMEN2Q8NCW0 462 aa26.72■■□□□ 1.87
SNF8-213ENST00000514929 CLSTN3Q9BQT9 956 aa26.72■■□□□ 1.87
SNF8-213ENST00000514929 PLEKHA5Q9HAU0 1116 aa26.72■■□□□ 1.87
SNF8-213ENST00000514929 MYMKA6NI61 221 aa26.71■■□□□ 1.87
SNF8-213ENST00000514929 PPP6R2O75170 966 aa26.71■■□□□ 1.87
SNF8-213ENST00000514929 RPL9P32969 192 aaKnown RBP26.71■■□□□ 1.87
SNF8-213ENST00000514929 BRCC3P46736 316 aa26.71■■□□□ 1.87
SNF8-213ENST00000514929 FOXD4L6Q3SYB3 417 aaPredicted RBP26.71■■□□□ 1.87
SNF8-213ENST00000514929 ZC2HC1CQ53FD0 456 aaPredicted RBP26.71■■□□□ 1.87
SNF8-213ENST00000514929 CD300LGQ6UXG3 332 aa26.71■■□□□ 1.87
SNF8-213ENST00000514929 CYP26C1Q6V0L0 522 aa26.71■■□□□ 1.87
SNF8-213ENST00000514929 FOXD4L3Q6VB84 417 aaPredicted RBP26.71■■□□□ 1.87
SNF8-213ENST00000514929 USTQ9Y2C2 406 aa26.71■■□□□ 1.87
SNF8-213ENST00000514929 NUB1Q9Y5A7 615 aa26.71■■□□□ 1.87
SNF8-213ENST00000514929 OGTO15294 1046 aa26.7■■□□□ 1.86
SNF8-213ENST00000514929 YEATS4O95619 227 aa26.7■■□□□ 1.86
SNF8-213ENST00000514929 TKTP29401 623 aaKnown RBP26.7■■□□□ 1.86
SNF8-213ENST00000514929 TNFSF9P41273 254 aa26.7■■□□□ 1.86
SNF8-213ENST00000514929 ZXDAP98168 799 aa26.7■■□□□ 1.86
SNF8-213ENST00000514929 PPP2R3AQ06190 1150 aa26.7■■□□□ 1.86
SNF8-213ENST00000514929 PTPN21Q16825 1174 aa26.7■■□□□ 1.86
SNF8-213ENST00000514929 PDILTQ8N807 584 aa26.7■■□□□ 1.86
SNF8-213ENST00000514929 ACSF2Q96CM8 615 aaPredicted RBP26.7■■□□□ 1.86
SNF8-213ENST00000514929 MSTO1Q9BUK6 570 aa26.7■■□□□ 1.86
SNF8-213ENST00000514929 ST6GALNAC4Q9H4F1 302 aa26.7■■□□□ 1.86
SNF8-213ENST00000514929 PIDD1Q9HB75 910 aa26.7■■□□□ 1.86
SNF8-213ENST00000514929 ZDHHC7Q9NXF8 308 aa26.7■■□□□ 1.86
SNF8-213ENST00000514929 SEL1LQ9UBV2 794 aa26.7■■□□□ 1.86
SNF8-213ENST00000514929 VWA8A3KMH1 1905 aa26.69■■□□□ 1.86
SNF8-213ENST00000514929 A0A087X0B3 334 aa26.69■■□□□ 1.86
SNF8-213ENST00000514929 F13A1P00488 732 aa26.69■■□□□ 1.86
SNF8-213ENST00000514929 GAP43P17677 238 aa26.69■■□□□ 1.86
SNF8-213ENST00000514929 SPAG1Q07617 926 aa26.69■■□□□ 1.86
SNF8-213ENST00000514929 PLCD3Q8N3E9 789 aa26.69■■□□□ 1.86
SNF8-213ENST00000514929 SMG7Q92540 1137 aaKnown RBP26.69■■□□□ 1.86
SNF8-213ENST00000514929 DNAJC19Q96DA6 116 aa26.69■■□□□ 1.86
SNF8-213ENST00000514929 MRPL44Q9H9J2 332 aaKnown RBP26.69■■□□□ 1.86
SNF8-213ENST00000514929 RPF1Q9H9Y2 349 aaKnown RBP26.69■■□□□ 1.86
SNF8-213ENST00000514929 TUBGCP4Q9UGJ1 667 aa26.69■■□□□ 1.86
SNF8-213ENST00000514929 HCN4Q9Y3Q4 1203 aa26.69■■□□□ 1.86
SNF8-213ENST00000514929 DENND4AQ7Z401 1863 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms