RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 PTPN14Q15678 1187 aa17.26■□□□□ 0.35
NUP54-214ENST00000514307 PKN2Q16513 984 aaKnown RBP17.26■□□□□ 0.35
NUP54-214ENST00000514307 FAM26DQ5JW98 314 aa17.26■□□□□ 0.35
NUP54-214ENST00000514307 RAD9BQ6WBX8 426 aa17.26■□□□□ 0.35
NUP54-214ENST00000514307 TRAPPC11Q7Z392 1133 aa17.26■□□□□ 0.35
NUP54-214ENST00000514307 IRF2BP2Q7Z5L9 587 aa17.26■□□□□ 0.35
NUP54-214ENST00000514307 CDR2LQ86X02 465 aaPredicted RBP17.26■□□□□ 0.35
NUP54-214ENST00000514307 SLC43A3Q8NBI5 491 aa17.26■□□□□ 0.35
NUP54-214ENST00000514307 TAS1R2Q8TE23 839 aa17.26■□□□□ 0.35
NUP54-214ENST00000514307 TAF4BQ92750 862 aa17.26■□□□□ 0.35
NUP54-214ENST00000514307 RNF208Q9H0X6 261 aa17.26■□□□□ 0.35
NUP54-214ENST00000514307 UNC93B1Q9H1C4 597 aa17.26■□□□□ 0.35
NUP54-214ENST00000514307 TOPORSQ9NS56 1045 aaPredicted RBP17.26■□□□□ 0.35
NUP54-214ENST00000514307 C1orf112Q9NSG2 853 aa17.26■□□□□ 0.35
NUP54-214ENST00000514307 MROH7Q68CQ1 1323 aa17.25■□□□□ 0.35
NUP54-214ENST00000514307 NPTXRO95502 500 aa17.25■□□□□ 0.35
NUP54-214ENST00000514307 CCL5P13501 91 aa17.25■□□□□ 0.35
NUP54-214ENST00000514307 CAPN2P17655 700 aa17.25■□□□□ 0.35
NUP54-214ENST00000514307 FGFR4P22455 802 aa17.25■□□□□ 0.35
NUP54-214ENST00000514307 TBXAS1P24557 533 aaPredicted RBP17.25■□□□□ 0.35
NUP54-214ENST00000514307 PRKCIP41743 596 aa17.25■□□□□ 0.35
NUP54-214ENST00000514307 BPIFB4P59827 614 aa17.25■□□□□ 0.35
NUP54-214ENST00000514307 GCNT1Q02742 428 aa17.25■□□□□ 0.35
NUP54-214ENST00000514307 NCOA4Q13772 614 aa17.25■□□□□ 0.35
NUP54-214ENST00000514307 ARHGAP44Q17R89 818 aa17.25■□□□□ 0.35
NUP54-214ENST00000514307 TDRD12Q587J7 1177 aaKnown RBP17.25■□□□□ 0.35
NUP54-214ENST00000514307 DNTTIP2Q5QJE6 756 aaKnown RBP17.25■□□□□ 0.35
NUP54-214ENST00000514307 C10orf76Q5T2E6 689 aa17.25■□□□□ 0.35
NUP54-214ENST00000514307 PPM1KQ8N3J5 372 aa17.25■□□□□ 0.35
NUP54-214ENST00000514307 SEMA4DQ92854 862 aa17.25■□□□□ 0.35
NUP54-214ENST00000514307 FAXDC2Q96IV6 333 aa17.25■□□□□ 0.35
NUP54-214ENST00000514307 PAK6Q9NQU5 681 aaPredicted RBP17.25■□□□□ 0.35
NUP54-214ENST00000514307 PIN4Q9Y237 131 aaKnown RBP17.25■□□□□ 0.35
NUP54-214ENST00000514307 NOC2LQ9Y3T9 749 aaKnown RBP17.25■□□□□ 0.35
NUP54-214ENST00000514307 A0A1W2PQ45 241 aaPredicted RBP17.24■□□□□ 0.35
NUP54-214ENST00000514307 A0A1W2PQY0 241 aa17.24■□□□□ 0.35
NUP54-214ENST00000514307 CHRNA1P02708 482 aa17.24■□□□□ 0.35
NUP54-214ENST00000514307 APBA1Q02410 837 aa17.24■□□□□ 0.35
NUP54-214ENST00000514307 ARID5AQ03989 594 aa17.24■□□□□ 0.35
NUP54-214ENST00000514307 SLC10A6Q3KNW5 377 aa17.24■□□□□ 0.35
NUP54-214ENST00000514307 TDRD10Q5VZ19 366 aaKnown RBP17.24■□□□□ 0.35
NUP54-214ENST00000514307 TOGARAM2Q6ZUX3 1019 aa17.24■□□□□ 0.35
NUP54-214ENST00000514307 CTU1Q7Z7A3 348 aaKnown RBP17.24■□□□□ 0.35
NUP54-214ENST00000514307 DHX38Q92620 1227 aaKnown RBP17.24■□□□□ 0.35
NUP54-214ENST00000514307 DEFB118Q96PH6 123 aa17.24■□□□□ 0.35
NUP54-214ENST00000514307 SENP6Q9GZR1 1112 aaPredicted RBP17.24■□□□□ 0.35
NUP54-214ENST00000514307 ARHGAP20Q9P2F6 1191 aa17.24■□□□□ 0.35
NUP54-214ENST00000514307 ST3GAL5Q9UNP4 418 aa17.24■□□□□ 0.35
NUP54-214ENST00000514307 C2CD2Q9Y426 696 aa17.24■□□□□ 0.35
NUP54-214ENST00000514307 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.24■□□□□ 0.35
NUP54-214ENST00000514307 F8VZ95 297 aa17.23■□□□□ 0.35
NUP54-214ENST00000514307 FOXN3O00409 490 aaPredicted RBP17.23■□□□□ 0.35
NUP54-214ENST00000514307 XPOTO43592 962 aaKnown RBP17.23■□□□□ 0.35
NUP54-214ENST00000514307 CXCL8P10145 99 aa17.23■□□□□ 0.35
NUP54-214ENST00000514307 ATICP31939 592 aa17.23■□□□□ 0.35
NUP54-214ENST00000514307 NFX1Q12986 1120 aaKnown RBP17.23■□□□□ 0.35
NUP54-214ENST00000514307 MTF1Q14872 753 aa17.23■□□□□ 0.35
NUP54-214ENST00000514307 HGSNATQ68CP4 663 aa17.23■□□□□ 0.35
NUP54-214ENST00000514307 GJB7Q6PEY0 223 aa17.23■□□□□ 0.35
NUP54-214ENST00000514307 OR5B17Q8NGF7 314 aa17.23■□□□□ 0.35
NUP54-214ENST00000514307 PPP1R13BQ96KQ4 1090 aa17.23■□□□□ 0.35
NUP54-214ENST00000514307 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.23■□□□□ 0.35
NUP54-214ENST00000514307 OGDHLQ9ULD0 1010 aa17.23■□□□□ 0.35
NUP54-214ENST00000514307 LCA5LO95447 670 aa17.22■□□□□ 0.35
NUP54-214ENST00000514307 TFRCP02786 760 aaKnown RBP17.22■□□□□ 0.35
NUP54-214ENST00000514307 SKIP12755 728 aa17.22■□□□□ 0.35
NUP54-214ENST00000514307 YWHAEP62258 255 aaKnown RBP17.22■□□□□ 0.35
NUP54-214ENST00000514307 RBP5P82980 135 aa17.22■□□□□ 0.35
NUP54-214ENST00000514307 MGAT3Q09327 533 aa17.22■□□□□ 0.35
NUP54-214ENST00000514307 BFSP2Q13515 415 aa17.22■□□□□ 0.35
NUP54-214ENST00000514307 TMEM132DQ14C87 1099 aa17.22■□□□□ 0.35
NUP54-214ENST00000514307 LMBRD2Q68DH5 695 aaPredicted RBP17.22■□□□□ 0.35
NUP54-214ENST00000514307 TWF2Q6IBS0 349 aaKnown RBP17.22■□□□□ 0.35
NUP54-214ENST00000514307 FBXO46Q6PJ61 603 aaPredicted RBP17.22■□□□□ 0.35
NUP54-214ENST00000514307 ZNF662Q6ZS27 426 aa17.22■□□□□ 0.35
NUP54-214ENST00000514307 KIAA1328Q86T90 577 aa17.22■□□□□ 0.35
NUP54-214ENST00000514307 FAM228AQ86W67 206 aa17.22■□□□□ 0.35
NUP54-214ENST00000514307 ARHGEF19Q8IW93 802 aa17.22■□□□□ 0.35
NUP54-214ENST00000514307 REXO1L1PQ8IX06 675 aa17.22■□□□□ 0.35
NUP54-214ENST00000514307 C17orf53Q8N3J3 647 aaPredicted RBP17.22■□□□□ 0.35
NUP54-214ENST00000514307 HELQQ8TDG4 1101 aa17.22■□□□□ 0.35
NUP54-214ENST00000514307 TMEM40Q8WWA1 233 aa17.22■□□□□ 0.35
NUP54-214ENST00000514307 TATDN2Q93075 761 aa17.22■□□□□ 0.35
NUP54-214ENST00000514307 HAUS4Q9H6D7 363 aa17.22■□□□□ 0.35
NUP54-214ENST00000514307 TLR3O15455 904 aaKnown RBP17.21■□□□□ 0.35
NUP54-214ENST00000514307 CLSTN1O94985 981 aa17.21■□□□□ 0.35
NUP54-214ENST00000514307 VNN1O95497 513 aa17.21■□□□□ 0.35
NUP54-214ENST00000514307 CST3P01034 146 aaPredicted RBP17.21■□□□□ 0.35
NUP54-214ENST00000514307 P4HA1P13674 534 aa17.21■□□□□ 0.35
NUP54-214ENST00000514307 TNFAIP3P21580 790 aa17.21■□□□□ 0.35
NUP54-214ENST00000514307 USP8P40818 1118 aa17.21■□□□□ 0.35
NUP54-214ENST00000514307 MAGEA1P43355 309 aa17.21■□□□□ 0.35
NUP54-214ENST00000514307 CDK7P50613 346 aa17.21■□□□□ 0.35
NUP54-214ENST00000514307 KIF11P52732 1056 aa17.21■□□□□ 0.35
NUP54-214ENST00000514307 KIF5AQ12840 1032 aa17.21■□□□□ 0.35
NUP54-214ENST00000514307 PAK2Q13177 524 aa17.21■□□□□ 0.35
NUP54-214ENST00000514307 ARHGAP29Q52LW3 1261 aa17.21■□□□□ 0.35
NUP54-214ENST00000514307 JADE1Q6IE81 842 aa17.21■□□□□ 0.35
NUP54-214ENST00000514307 FAM71AQ8IYT1 594 aa17.21■□□□□ 0.35
NUP54-214ENST00000514307 CEP120Q8N960 986 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms