RNA–Protein interactions for RNA: ENST00000514219.1

TRIM41-206, Transcript of tripartite motif containing 41, humanhuman

TSL 5

Gene TRIM41, Length 459 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-206ENST00000514219 ABLIM1O14639 778 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 ZNF623O75123 536 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 NPTXRO95502 500 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 TNNC2P02585 160 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 STAG3L1P0CL83 205 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 ACRP10323 421 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 TNNI1P19237 187 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 CD52P31358 61 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 CASP4P49662 377 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 ACOT2P49753 483 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 KCNQ1P51787 676 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 KCNH2Q12809 1159 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 AAK1Q2M2I8 961 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 SPECC1LQ69YQ0 1117 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 KRT39Q6A163 491 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 CBWD2Q8IUF1 395 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 RDH13Q8NBN7 331 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 PARD3BQ8TEW8 1205 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 EEF2KMTQ96G04 330 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 ANKRD36BP1Q96IX9 119 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 ERGIC2Q96RQ1 377 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 CGRRF1Q99675 332 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 XPO4Q9C0E2 1151 aaKnown RBP17.26■□□□□ 0.35
TRIM41-206ENST00000514219 VPS16Q9H269 839 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 SLC28A3Q9HAS3 691 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 TMEM8AQ9HCN3 771 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 FAM105AQ9NUU6 356 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 SLC38A7Q9NVC3 462 aa17.26■□□□□ 0.35
TRIM41-206ENST00000514219 CARNS1A5YM72 827 aa17.25■□□□□ 0.35
TRIM41-206ENST00000514219 GOLGA8IPA6NC78 632 aa17.25■□□□□ 0.35
TRIM41-206ENST00000514219 GOLGA8JA6NMD2 632 aa17.25■□□□□ 0.35
TRIM41-206ENST00000514219 TISP43B9A030 160 aa17.25■□□□□ 0.35
TRIM41-206ENST00000514219 CSDE1O75534 798 aaKnown RBP17.25■□□□□ 0.35
TRIM41-206ENST00000514219 EOMESO95936 686 aa17.25■□□□□ 0.35
TRIM41-206ENST00000514219 TMEM191BP0C7N4 346 aa17.25■□□□□ 0.35
TRIM41-206ENST00000514219 ACTN1P12814 892 aa17.25■□□□□ 0.35
TRIM41-206ENST00000514219 MXI1P50539 228 aa17.25■□□□□ 0.35
TRIM41-206ENST00000514219 CLDN10P78369 228 aa17.25■□□□□ 0.35
TRIM41-206ENST00000514219 MYL7Q01449 175 aa17.25■□□□□ 0.35
TRIM41-206ENST00000514219 NR1I3Q14994 352 aa17.25■□□□□ 0.35
TRIM41-206ENST00000514219 DUOXA2Q1HG44 320 aa17.25■□□□□ 0.35
TRIM41-206ENST00000514219 TMEM31Q5JXX7 168 aa17.25■□□□□ 0.35
TRIM41-206ENST00000514219 GBP6Q6ZN66 633 aa17.25■□□□□ 0.35
TRIM41-206ENST00000514219 SLC24A5Q71RS6 500 aa17.25■□□□□ 0.35
TRIM41-206ENST00000514219 MICALL1Q8N3F8 863 aa17.25■□□□□ 0.35
TRIM41-206ENST00000514219 ZNF397Q8NF99 534 aaPredicted RBP17.25■□□□□ 0.35
TRIM41-206ENST00000514219 CCDC127Q96BQ5 260 aa17.25■□□□□ 0.35
TRIM41-206ENST00000514219 BORCS6Q96GS4 357 aa17.25■□□□□ 0.35
TRIM41-206ENST00000514219 ZBTB45Q96K62 511 aaPredicted RBP17.25■□□□□ 0.35
TRIM41-206ENST00000514219 PCMTD1Q96MG8 357 aaPredicted RBP17.25■□□□□ 0.35
TRIM41-206ENST00000514219 RPS6KC1Q96S38 1066 aa17.25■□□□□ 0.35
TRIM41-206ENST00000514219 YBX2Q9Y2T7 364 aaKnown RBP17.25■□□□□ 0.35
TRIM41-206ENST00000514219 GIT1Q9Y2X7 761 aa17.25■□□□□ 0.35
TRIM41-206ENST00000514219 RALGAPA2Q2PPJ7 1873 aa17.24■□□□□ 0.35
TRIM41-206ENST00000514219 A0A0U1RQF3 1178 aa17.24■□□□□ 0.35
TRIM41-206ENST00000514219 FAM189A1O60320 539 aa17.24■□□□□ 0.35
TRIM41-206ENST00000514219 ZC3H11AO75152 810 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRIM41-206ENST00000514219 CXCL10P02778 98 aa17.24■□□□□ 0.35
TRIM41-206ENST00000514219 DLATP10515 647 aaKnown RBP17.24■□□□□ 0.35
TRIM41-206ENST00000514219 ITGA4P13612 1032 aa17.24■□□□□ 0.35
TRIM41-206ENST00000514219 FGFR4P22455 802 aa17.24■□□□□ 0.35
TRIM41-206ENST00000514219 FMO5P49326 533 aa17.24■□□□□ 0.35
TRIM41-206ENST00000514219 GSDMDP57764 484 aa17.24■□□□□ 0.35
TRIM41-206ENST00000514219 PLEKHG4Q58EX7 1191 aa17.24■□□□□ 0.35
TRIM41-206ENST00000514219 EEF1DP3Q658K8 133 aa17.24■□□□□ 0.35
TRIM41-206ENST00000514219 PPFIBP1Q86W92 1011 aa17.24■□□□□ 0.35
TRIM41-206ENST00000514219 HERVK_113Q902F9 699 aa17.24■□□□□ 0.35
TRIM41-206ENST00000514219 NUCKS1Q9H1E3 243 aaKnown RBP17.24■□□□□ 0.35
TRIM41-206ENST00000514219 RGS18Q9NS28 235 aa17.24■□□□□ 0.35
TRIM41-206ENST00000514219 PCDHB2Q9Y5E7 798 aa17.24■□□□□ 0.35
TRIM41-206ENST00000514219 PHACTR2O75167 634 aa17.23■□□□□ 0.35
TRIM41-206ENST00000514219 EDN1P05305 212 aa17.23■□□□□ 0.35
TRIM41-206ENST00000514219 TRIM21P19474 475 aaKnown RBP17.23■□□□□ 0.35
TRIM41-206ENST00000514219 PAX3P23760 479 aa17.23■□□□□ 0.35
TRIM41-206ENST00000514219 TMEM132DQ14C87 1099 aa17.23■□□□□ 0.35
TRIM41-206ENST00000514219 EXOC3L4Q17RC7 722 aa17.23■□□□□ 0.35
TRIM41-206ENST00000514219 TSR1Q2NL82 804 aaKnown RBP17.23■□□□□ 0.35
TRIM41-206ENST00000514219 WDR44Q5JSH3 913 aa17.23■□□□□ 0.35
TRIM41-206ENST00000514219 MIIPQ5JXC2 388 aa17.23■□□□□ 0.35
TRIM41-206ENST00000514219 CNKSR3Q6P9H4 555 aa17.23■□□□□ 0.35
TRIM41-206ENST00000514219 FBXL13Q8NEE6 735 aa17.23■□□□□ 0.35
TRIM41-206ENST00000514219 ADAM2Q99965 735 aa17.23■□□□□ 0.35
TRIM41-206ENST00000514219 PPP1R12CQ9BZL4 782 aa17.23■□□□□ 0.35
TRIM41-206ENST00000514219 EDEM3Q9BZQ6 932 aa17.23■□□□□ 0.35
TRIM41-206ENST00000514219 DNAI2Q9GZS0 605 aa17.23■□□□□ 0.35
TRIM41-206ENST00000514219 ELAC1Q9H777 363 aaKnown RBP17.23■□□□□ 0.35
TRIM41-206ENST00000514219 AGO3Q9H9G7 860 aaKnown RBP17.23■□□□□ 0.35
TRIM41-206ENST00000514219 IPPQ9Y573 584 aa17.23■□□□□ 0.35
TRIM41-206ENST00000514219 BAIAP3O94812 1187 aa17.22■□□□□ 0.35
TRIM41-206ENST00000514219 ADRB2P07550 413 aa17.22■□□□□ 0.35
TRIM41-206ENST00000514219 BIRC3Q13489 604 aa17.22■□□□□ 0.35
TRIM41-206ENST00000514219 IKBKEQ14164 716 aa17.22■□□□□ 0.35
TRIM41-206ENST00000514219 DSC3Q14574 896 aa17.22■□□□□ 0.35
TRIM41-206ENST00000514219 ENOX2Q16206 610 aaKnown RBP17.22■□□□□ 0.35
TRIM41-206ENST00000514219 FIGNQ5HY92 759 aa17.22■□□□□ 0.35
TRIM41-206ENST00000514219 TRAF7Q6Q0C0 670 aa17.22■□□□□ 0.35
TRIM41-206ENST00000514219 CRELD2Q6UXH1 353 aaPredicted RBP17.22■□□□□ 0.35
TRIM41-206ENST00000514219 APTXQ7Z2E3 356 aaKnown RBP17.22■□□□□ 0.35
TRIM41-206ENST00000514219 CNGA4Q8IV77 575 aa17.22■□□□□ 0.35
TRIM41-206ENST00000514219 VSTM4Q8IW00 320 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms