RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 GDE1Q9NZC3 331 aa22.47■■□□□ 1.19
SQSTM1-215ENST00000514093 RAB23Q9ULC3 237 aa22.47■■□□□ 1.19
SQSTM1-215ENST00000514093 LYPLA2O95372 231 aa22.46■■□□□ 1.19
SQSTM1-215ENST00000514093 RARRES1P49788 294 aa22.46■■□□□ 1.19
SQSTM1-215ENST00000514093 TMEM132AQ24JP5 1023 aa22.46■■□□□ 1.19
SQSTM1-215ENST00000514093 PPM1JQ5JR12 505 aa22.46■■□□□ 1.19
SQSTM1-215ENST00000514093 PRR23BQ6ZRT6 265 aa22.46■■□□□ 1.19
SQSTM1-215ENST00000514093 SLFN12Q8IYM2 578 aa22.46■■□□□ 1.19
SQSTM1-215ENST00000514093 FAM177A1Q8N128 213 aaPredicted RBP22.46■■□□□ 1.19
SQSTM1-215ENST00000514093 ZNF687Q8N1G0 1237 aa22.46■■□□□ 1.19
SQSTM1-215ENST00000514093 ZNF274Q96GC6 653 aaPredicted RBP22.46■■□□□ 1.19
SQSTM1-215ENST00000514093 CHAMP1Q96JM3 812 aa22.46■■□□□ 1.19
SQSTM1-215ENST00000514093 PRMT7Q9NVM4 692 aaPredicted RBP22.46■■□□□ 1.19
SQSTM1-215ENST00000514093 MAP1BP46821 2468 aaKnown RBP22.46■■□□□ 1.19
SQSTM1-215ENST00000514093 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.45■■□□□ 1.18
SQSTM1-215ENST00000514093 I3L4J1 428 aa22.45■■□□□ 1.18
SQSTM1-215ENST00000514093 B3GAT3O94766 335 aa22.45■■□□□ 1.18
SQSTM1-215ENST00000514093 LIG1P18858 919 aa22.45■■□□□ 1.18
SQSTM1-215ENST00000514093 TKTP29401 623 aaKnown RBP22.45■■□□□ 1.18
SQSTM1-215ENST00000514093 GLRA4Q5JXX5 417 aa22.45■■□□□ 1.18
SQSTM1-215ENST00000514093 CPLX2Q6PUV4 134 aaKnown RBP22.45■■□□□ 1.18
SQSTM1-215ENST00000514093 PPP4R3CPQ6ZMV5 832 aa22.45■■□□□ 1.18
SQSTM1-215ENST00000514093 ELSPBP1Q96BH3 223 aa22.45■■□□□ 1.18
SQSTM1-215ENST00000514093 TCEAL4Q96EI5 215 aa22.45■■□□□ 1.18
SQSTM1-215ENST00000514093 CHRDQ9H2X0 955 aa22.45■■□□□ 1.18
SQSTM1-215ENST00000514093 FZD8Q9H461 694 aa22.45■■□□□ 1.18
SQSTM1-215ENST00000514093 BRD9Q9H8M2 597 aa22.45■■□□□ 1.18
SQSTM1-215ENST00000514093 LMAN1LQ9HAT1 526 aa22.45■■□□□ 1.18
SQSTM1-215ENST00000514093 GDAQ9Y2T3 454 aa22.45■■□□□ 1.18
SQSTM1-215ENST00000514093 FCARP24071 287 aa22.44■■□□□ 1.18
SQSTM1-215ENST00000514093 CLCNKBP51801 687 aa22.44■■□□□ 1.18
SQSTM1-215ENST00000514093 PRIMPOLQ96LW4 560 aa22.44■■□□□ 1.18
SQSTM1-215ENST00000514093 NAP1L4Q99733 375 aaKnown RBP22.44■■□□□ 1.18
SQSTM1-215ENST00000514093 CORO1BQ9BR76 489 aa22.44■■□□□ 1.18
SQSTM1-215ENST00000514093 PCDHA12Q9UN75 941 aa22.44■■□□□ 1.18
SQSTM1-215ENST00000514093 N4BP3O15049 544 aa22.43■■□□□ 1.18
SQSTM1-215ENST00000514093 PTPN2P17706 415 aa22.43■■□□□ 1.18
SQSTM1-215ENST00000514093 KCNA4P22459 653 aa22.43■■□□□ 1.18
SQSTM1-215ENST00000514093 BRCC3P46736 316 aa22.43■■□□□ 1.18
SQSTM1-215ENST00000514093 NRLP54845 237 aa22.43■■□□□ 1.18
SQSTM1-215ENST00000514093 FAM78AQ5JUQ0 283 aa22.43■■□□□ 1.18
SQSTM1-215ENST00000514093 EEF1DP3Q658K8 133 aa22.43■■□□□ 1.18
SQSTM1-215ENST00000514093 LAIR1Q6GTX8 287 aa22.43■■□□□ 1.18
SQSTM1-215ENST00000514093 CD300LGQ6UXG3 332 aa22.43■■□□□ 1.18
SQSTM1-215ENST00000514093 ZBTB8OSQ8IWT0 167 aa22.43■■□□□ 1.18
SQSTM1-215ENST00000514093 CELF5Q8N6W0 485 aaKnown RBP22.43■■□□□ 1.18
SQSTM1-215ENST00000514093 DNASE1L2Q92874 299 aa22.43■■□□□ 1.18
SQSTM1-215ENST00000514093 DDX27Q96GQ7 796 aaKnown RBP22.43■■□□□ 1.18
SQSTM1-215ENST00000514093 GOLGA2P5Q9HBQ8 144 aa22.43■■□□□ 1.18
SQSTM1-215ENST00000514093 ZSWIM6Q9HCJ5 1215 aa22.43■■□□□ 1.18
SQSTM1-215ENST00000514093 CHD8Q9HCK8 2581 aa22.43■■□□□ 1.18
SQSTM1-215ENST00000514093 MAN2B1O00754 1011 aa22.42■■□□□ 1.18
SQSTM1-215ENST00000514093 SLC30A4O14863 429 aa22.42■■□□□ 1.18
SQSTM1-215ENST00000514093 LRG1P02750 347 aa22.42■■□□□ 1.18
SQSTM1-215ENST00000514093 EDN1P05305 212 aa22.42■■□□□ 1.18
SQSTM1-215ENST00000514093 ARPP19P56211 112 aa22.42■■□□□ 1.18
SQSTM1-215ENST00000514093 PRPF4BQ13523 1007 aaKnown RBP22.42■■□□□ 1.18
SQSTM1-215ENST00000514093 CDCA2Q69YH5 1023 aaPredicted RBP22.42■■□□□ 1.18
SQSTM1-215ENST00000514093 RTL10Q7L3V2 364 aa22.42■■□□□ 1.18
SQSTM1-215ENST00000514093 NETO1Q8TDF5 533 aa22.42■■□□□ 1.18
SQSTM1-215ENST00000514093 FAM3CQ92520 227 aa22.42■■□□□ 1.18
SQSTM1-215ENST00000514093 TRMT61BQ9BVS5 477 aaKnown RBP22.42■■□□□ 1.18
SQSTM1-215ENST00000514093 ZFP14Q9HCL3 533 aa22.42■■□□□ 1.18
SQSTM1-215ENST00000514093 BACE2Q9Y5Z0 518 aa22.42■■□□□ 1.18
SQSTM1-215ENST00000514093 CYP46A1Q9Y6A2 500 aa22.42■■□□□ 1.18
SQSTM1-215ENST00000514093 GDF9O60383 454 aa22.41■■□□□ 1.18
SQSTM1-215ENST00000514093 RETP07949 1114 aa22.41■■□□□ 1.18
SQSTM1-215ENST00000514093 GDI1P31150 447 aa22.41■■□□□ 1.18
SQSTM1-215ENST00000514093 SATB1Q01826 763 aa22.41■■□□□ 1.18
SQSTM1-215ENST00000514093 SRSF5Q13243 272 aaKnown RBP22.41■■□□□ 1.18
SQSTM1-215ENST00000514093 NR5A1Q13285 461 aa22.41■■□□□ 1.18
SQSTM1-215ENST00000514093 FAM187BQ17R55 369 aa22.41■■□□□ 1.18
SQSTM1-215ENST00000514093 PRSS36Q5K4E3 855 aa22.41■■□□□ 1.18
SQSTM1-215ENST00000514093 C3orf58Q8NDZ4 430 aa22.41■■□□□ 1.18
SQSTM1-215ENST00000514093 BSNDQ8WZ55 320 aa22.41■■□□□ 1.18
SQSTM1-215ENST00000514093 TTC12Q9H892 705 aaPredicted RBP22.41■■□□□ 1.18
SQSTM1-215ENST00000514093 AVENQ9NQS1 362 aaPredicted RBP22.41■■□□□ 1.18
SQSTM1-215ENST00000514093 SEMA4GQ9NTN9 838 aa22.41■■□□□ 1.18
SQSTM1-215ENST00000514093 TMEM189-UBE2V1I3L0A0 370 aa22.4■■□□□ 1.18
SQSTM1-215ENST00000514093 PRRG1O14668 218 aa22.4■■□□□ 1.18
SQSTM1-215ENST00000514093 PRKCBP05771 671 aa22.4■■□□□ 1.18
SQSTM1-215ENST00000514093 ATP2B1P20020 1258 aa22.4■■□□□ 1.18
SQSTM1-215ENST00000514093 ELF1P32519 619 aa22.4■■□□□ 1.18
SQSTM1-215ENST00000514093 CCR2P41597 374 aa22.4■■□□□ 1.18
SQSTM1-215ENST00000514093 TXKP42681 527 aa22.4■■□□□ 1.18
SQSTM1-215ENST00000514093 CCR3P51677 355 aa22.4■■□□□ 1.18
SQSTM1-215ENST00000514093 ROR1Q01973 937 aa22.4■■□□□ 1.18
SQSTM1-215ENST00000514093 DMWDQ09019 674 aa22.4■■□□□ 1.18
SQSTM1-215ENST00000514093 SCRN1Q12765 414 aa22.4■■□□□ 1.18
SQSTM1-215ENST00000514093 SIM2Q14190 667 aaPredicted RBP22.4■■□□□ 1.18
SQSTM1-215ENST00000514093 PPP2R5DQ14738 602 aa22.4■■□□□ 1.18
SQSTM1-215ENST00000514093 CALCRLQ16602 461 aa22.4■■□□□ 1.18
SQSTM1-215ENST00000514093 ANKS3Q6ZW76 656 aa22.4■■□□□ 1.18
SQSTM1-215ENST00000514093 ZNF461Q8TAF7 563 aa22.4■■□□□ 1.18
SQSTM1-215ENST00000514093 ZSWIM3Q96MP5 696 aa22.4■■□□□ 1.18
SQSTM1-215ENST00000514093 ZNF334Q9HCZ1 680 aaPredicted RBP22.4■■□□□ 1.18
SQSTM1-215ENST00000514093 PIAS3Q9Y6X2 628 aa22.4■■□□□ 1.18
SQSTM1-215ENST00000514093 CFAP47Q6ZTR5 3102 aa22.4■■□□□ 1.18
SQSTM1-215ENST00000514093 ARHGEF37A1IGU5 675 aa22.39■■□□□ 1.17
SQSTM1-215ENST00000514093 WDR27A2RRH5 827 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms