RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.13□□□□□ -0.79
SH3D19-209ENST00000514013 RAB23Q9ULC3 237 aa10.13□□□□□ -0.79
SH3D19-209ENST00000514013 ZMIZ1Q9ULJ6 1067 aa10.13□□□□□ -0.79
SH3D19-209ENST00000514013 POLIQ9UNA4 740 aa10.13□□□□□ -0.79
SH3D19-209ENST00000514013 COL4A3BPQ9Y5P4 624 aa10.13□□□□□ -0.79
SH3D19-209ENST00000514013 MYH9P35579 1960 aaKnown RBP10.13□□□□□ -0.79
SH3D19-209ENST00000514013 NOTCH4Q99466 2003 aa10.12□□□□□ -0.79
SH3D19-209ENST00000514013 GAS7O60861 476 aa10.12□□□□□ -0.79
SH3D19-209ENST00000514013 HNRNPA1P09651 372 aaKnown RBP eCLIP10.12□□□□□ -0.79
SH3D19-209ENST00000514013 SRGAP2CP0DJJ0 459 aa10.12□□□□□ -0.79
SH3D19-209ENST00000514013 ITGA4P13612 1032 aa10.12□□□□□ -0.79
SH3D19-209ENST00000514013 IGFBP6P24592 240 aaPredicted RBP10.12□□□□□ -0.79
SH3D19-209ENST00000514013 CDC27P30260 824 aa10.12□□□□□ -0.79
SH3D19-209ENST00000514013 JAK3P52333 1124 aa10.12□□□□□ -0.79
SH3D19-209ENST00000514013 NPEPPSP55786 919 aa10.12□□□□□ -0.79
SH3D19-209ENST00000514013 CDC42EP1Q00587 391 aa10.12□□□□□ -0.79
SH3D19-209ENST00000514013 GRM2Q14416 872 aa10.12□□□□□ -0.79
SH3D19-209ENST00000514013 WDR44Q5JSH3 913 aa10.12□□□□□ -0.79
SH3D19-209ENST00000514013 PPM1LQ5SGD2 360 aa10.12□□□□□ -0.79
SH3D19-209ENST00000514013 GPR65Q8IYL9 337 aa10.12□□□□□ -0.79
SH3D19-209ENST00000514013 LNX1Q8TBB1 728 aaPredicted RBP10.12□□□□□ -0.79
SH3D19-209ENST00000514013 SLC7A14Q8TBB6 771 aa10.12□□□□□ -0.79
SH3D19-209ENST00000514013 HASPINQ8TF76 798 aa10.12□□□□□ -0.79
SH3D19-209ENST00000514013 PRPF31Q8WWY3 499 aaKnown RBP10.12□□□□□ -0.79
SH3D19-209ENST00000514013 TMEM143Q96AN5 459 aa10.12□□□□□ -0.79
SH3D19-209ENST00000514013 MCRS1Q96EZ8 462 aa10.12□□□□□ -0.79
SH3D19-209ENST00000514013 APOL6Q9BWW8 343 aa10.12□□□□□ -0.79
SH3D19-209ENST00000514013 NXF3Q9H4D5 531 aaKnown RBP10.12□□□□□ -0.79
SH3D19-209ENST00000514013 ADAM28Q9UKQ2 775 aa10.12□□□□□ -0.79
SH3D19-209ENST00000514013 NCANO14594 1321 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 NBEAQ8NFP9 2946 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 hCG_1984214I3L0E3 225 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 K7ESF4 209 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 SLC27A2O14975 620 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 GPR37O15354 613 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 NCAM2O15394 837 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 TSPAN1O60635 241 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 ECI2O75521 394 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 PSMD10O75832 226 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 CEBPBP17676 345 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 SPINK2P20155 84 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 HOXA9P31269 272 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 SFNP31947 248 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 DNM2P50570 870 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 RTN1Q16799 776 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 PABPC1LQ4VXU2 614 aaKnown RBP10.11□□□□□ -0.79
SH3D19-209ENST00000514013 LIN9Q5TKA1 542 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 LRCH2Q5VUJ6 765 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 DIEXFQ68CQ4 756 aaKnown RBP10.11□□□□□ -0.79
SH3D19-209ENST00000514013 UNQ6494/PRO21346Q6UXR6 183 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 MIER3Q7Z3K6 550 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.11□□□□□ -0.79
SH3D19-209ENST00000514013 REXO1Q8N1G1 1221 aaKnown RBP10.11□□□□□ -0.79
SH3D19-209ENST00000514013 ZNF713Q8N859 430 aaPredicted RBP10.11□□□□□ -0.79
SH3D19-209ENST00000514013 CPB2Q96IY4 423 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 RIT2Q99578 217 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 COLEC11Q9BWP8 271 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 ZMYND12Q9H0C1 365 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 CXCL16Q9H2A7 254 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 SMOC1Q9H4F8 434 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 LMAN1LQ9HAT1 526 aa10.11□□□□□ -0.79
SH3D19-209ENST00000514013 WRAP73Q9P2S5 460 aaPredicted RBP10.11□□□□□ -0.79
SH3D19-209ENST00000514013 COL4A2P08572 1712 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 ESYT2A0FGR8 921 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 DXOO77932 396 aaKnown RBP10.1□□□□□ -0.79
SH3D19-209ENST00000514013 KIF4AO95239 1232 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 TOP3BO95985 862 aaKnown RBP10.1□□□□□ -0.79
SH3D19-209ENST00000514013 CHRNB1P11230 501 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 AKAP5P24588 427 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 LIMK1P53667 647 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 LAMTOR4Q0VGL1 99 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 PSMD5Q16401 504 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 PFKFB3Q16875 520 aaPredicted RBP10.1□□□□□ -0.79
SH3D19-209ENST00000514013 HEATR6Q6AI08 1181 aaKnown RBP10.1□□□□□ -0.79
SH3D19-209ENST00000514013 IL31Q6EBC2 164 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 Q6ZS52 159 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 SRGAP1Q7Z6B7 1085 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 CDR2LQ86X02 465 aaPredicted RBP10.1□□□□□ -0.79
SH3D19-209ENST00000514013 RUFY2Q8WXA3 655 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 PIK3R5Q8WYR1 880 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 DNASE1L2Q92874 299 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 CCDC136Q96JN2 1154 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 USB1Q9BQ65 265 aaKnown RBP10.1□□□□□ -0.79
SH3D19-209ENST00000514013 TEKT3Q9BXF9 490 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 LSG1Q9H089 658 aaKnown RBP10.1□□□□□ -0.79
SH3D19-209ENST00000514013 GLT8D2Q9H1C3 349 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 RBM12Q9NTZ6 932 aaKnown RBP10.1□□□□□ -0.79
SH3D19-209ENST00000514013 RBM28Q9NW13 759 aaKnown RBP10.1□□□□□ -0.79
SH3D19-209ENST00000514013 KLK14Q9P0G3 267 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 KCNH3Q9ULD8 1083 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 WASF3Q9UPY6 502 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 MRPS17Q9Y2R5 130 aaKnown RBP10.1□□□□□ -0.79
SH3D19-209ENST00000514013 MRPS23Q9Y3D9 190 aaKnown RBP10.1□□□□□ -0.79
SH3D19-209ENST00000514013 DMXL2Q8TDJ6 3036 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 WDFY3Q8IZQ1 3526 aa10.1□□□□□ -0.79
SH3D19-209ENST00000514013 WDR81Q562E7 1941 aa10.09□□□□□ -0.79
SH3D19-209ENST00000514013 MTCL1Q9Y4B5 1905 aaKnown RBP10.09□□□□□ -0.79
SH3D19-209ENST00000514013 SMG1Q96Q15 3661 aaKnown RBP10.09□□□□□ -0.79
SH3D19-209ENST00000514013 CASTOR2A6NHX0 329 aa10.09□□□□□ -0.79
SH3D19-209ENST00000514013 GOLGA8AA7E2F4 631 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms