RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 KIF4AO95239 1232 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 FTLP02792 175 aaPredicted RBP16.06■□□□□ 0.16
VCAN-211ENST00000513984 MMEP08473 750 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 CLTAP09496 248 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 RHOXF2BP0C7M4 288 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 IQCF3P0C7M6 154 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 TBXAS1P24557 533 aaPredicted RBP16.06■□□□□ 0.16
VCAN-211ENST00000513984 PAFAH1B1P43034 410 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 INHBEP58166 350 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 NOP14P78316 857 aaKnown RBP16.06■□□□□ 0.16
VCAN-211ENST00000513984 PPFIA1Q13136 1202 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 RPS6KA1Q15418 735 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 GRIK4Q16099 956 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 AMHR2Q16671 573 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 MARCH8Q5T0T0 291 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 CCDC181Q5TID7 509 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 TAF3Q5VWG9 929 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 EEF1DP3Q658K8 133 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 TMCO3Q6UWJ1 677 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 RHOT2Q8IXI1 618 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 MMGT1Q8N4V1 131 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 ARID3AQ99856 593 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 RHOXF2Q9BQY4 288 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 CCDC94Q9BW85 323 aaPredicted RBP16.06■□□□□ 0.16
VCAN-211ENST00000513984 CDT1Q9H211 546 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 OSGEPQ9NPF4 335 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 PACSIN2Q9UNF0 486 aaPredicted RBP16.06■□□□□ 0.16
VCAN-211ENST00000513984 AKT3Q9Y243 479 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 STXBP5LQ9Y2K9 1186 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 TRIP12Q14669 1992 aaPredicted RBP16.06■□□□□ 0.16
VCAN-211ENST00000513984 TRIP11Q15643 1979 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 A0A087WZ62 844 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 A6NJR5 290 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 KRT5P13647 590 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 CUL2Q13617 745 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 NCOA4Q13772 614 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 CFAP221Q4G0U5 840 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 SPOPLQ6IQ16 392 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 CC2D1AQ6P1N0 951 aaPredicted RBP16.05■□□□□ 0.16
VCAN-211ENST00000513984 ZNF677Q86XU0 584 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 SPATA4Q8NEY3 305 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 FDXACB1Q9BRP7 624 aaPredicted RBP16.05■□□□□ 0.16
VCAN-211ENST00000513984 ABCB6Q9NP58 842 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 FLRT1Q9NZU1 646 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 TARSL2A2RTX5 802 aaKnown RBP16.05■□□□□ 0.16
VCAN-211ENST00000513984 PHACTR2O75167 634 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 ZNF865P0CJ78 1059 aaPredicted RBP16.05■□□□□ 0.16
VCAN-211ENST00000513984 ACO1P21399 889 aaKnown RBP16.05■□□□□ 0.16
VCAN-211ENST00000513984 BPIFB4P59827 614 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 GPC5P78333 572 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 C2orf54Q08AI8 447 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 WDR93Q6P2C0 686 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 PEX26Q7Z412 305 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 DAAM2Q86T65 1068 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 NT5DC3Q86UY8 548 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 HNRNPLLQ8WVV9 542 aaKnown RBP16.05■□□□□ 0.16
VCAN-211ENST00000513984 TAF4BQ92750 862 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 GOLPH3Q9H4A6 298 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 CNTN6Q9UQ52 1028 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 PCDHB2Q9Y5E7 798 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 PASKQ96RG2 1323 aa16.05■□□□□ 0.16
VCAN-211ENST00000513984 ZEB2O60315 1214 aa16.04■□□□□ 0.16
VCAN-211ENST00000513984 B4GALT4O60513 344 aa16.04■□□□□ 0.16
VCAN-211ENST00000513984 BUB1BO60566 1050 aaPredicted RBP16.04■□□□□ 0.16
VCAN-211ENST00000513984 ASS1P00966 412 aaKnown RBP16.04■□□□□ 0.16
VCAN-211ENST00000513984 VTNP04004 478 aa16.04■□□□□ 0.16
VCAN-211ENST00000513984 POU5F1Q01860 360 aaKnown RBP16.04■□□□□ 0.16
VCAN-211ENST00000513984 TMEM132AQ24JP5 1023 aa16.04■□□□□ 0.16
VCAN-211ENST00000513984 OLFML2BQ68BL8 750 aa16.04■□□□□ 0.16
VCAN-211ENST00000513984 THNSL1Q8IYQ7 743 aa16.04■□□□□ 0.16
VCAN-211ENST00000513984 HES6Q96HZ4 224 aa16.04■□□□□ 0.16
VCAN-211ENST00000513984 PBKQ96KB5 322 aa16.04■□□□□ 0.16
VCAN-211ENST00000513984 IMPG2Q9BZV3 1241 aa16.04■□□□□ 0.16
VCAN-211ENST00000513984 MTMR12Q9C0I1 747 aa16.04■□□□□ 0.16
VCAN-211ENST00000513984 EHD2Q9NZN4 543 aa16.04■□□□□ 0.16
VCAN-211ENST00000513984 COG5Q9UP83 839 aa16.04■□□□□ 0.16
VCAN-211ENST00000513984 NUB1Q9Y5A7 615 aa16.04■□□□□ 0.16
VCAN-211ENST00000513984 RRN3P2A6NIE6 340 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 DYNC1LI2O43237 492 aaPredicted RBP16.03■□□□□ 0.16
VCAN-211ENST00000513984 MTA2O94776 668 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 IL18RAPO95256 599 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 F2P00734 622 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 IGHA2P01877 340 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 MCF2P10911 925 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 DUOXA2Q1HG44 320 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 PRAMEF19Q5SWL8 479 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 SMYD5Q6GMV2 418 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 ZNF410Q86VK4 478 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 CEP120Q8N960 986 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 SOCS4Q8WXH5 440 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 ARFGAP3Q9NP61 516 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 SMARCAL1Q9NZC9 954 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 UMODL1Q5DID0 1318 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 FAM155AB1AL88 458 aaPredicted RBP16.03■□□□□ 0.16
VCAN-211ENST00000513984 GPR25O00155 361 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 ATP8B1O43520 1251 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 RGS2P41220 211 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 DNA2P51530 1060 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 VSNL1P62760 191 aa16.03■□□□□ 0.16
VCAN-211ENST00000513984 CLEC16AQ2KHT3 1053 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms