RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 COLEC11Q9BWP8 271 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 APOL6Q9BWW8 343 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 GTPBP4Q9BZE4 634 aaKnown RBP8.93□□□□□ -0.98
NEDD4-210ENST00000513957 ALG13Q9NP73 1137 aaKnown RBP8.93□□□□□ -0.98
NEDD4-210ENST00000513957 THEGQ9P2T0 379 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 HOOK1Q9UJC3 728 aaKnown RBP8.93□□□□□ -0.98
NEDD4-210ENST00000513957 VWA8A3KMH1 1905 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 SF3B1O75533 1304 aaKnown RBP eCLIP8.92□□□□□ -0.98
NEDD4-210ENST00000513957 PTGESO14684 152 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 NRP1O14786 923 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 FAM189A1O60320 539 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 SOD2P04179 222 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 ADRB2P07550 413 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 CTSAP10619 480 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 CYP3A5P20815 502 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 TIE1P35590 1138 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 OR1G1P47890 313 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 SLC11A1P49279 550 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 NDUFA8P51970 172 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 CAMK1Q14012 370 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 NAB2Q15742 525 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 BMT2Q1RMZ1 405 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 PUS10Q3MIT2 529 aaKnown RBP8.92□□□□□ -0.98
NEDD4-210ENST00000513957 ZC2HC1CQ53FD0 456 aaPredicted RBP8.92□□□□□ -0.98
NEDD4-210ENST00000513957 PDXDC1Q6P996 788 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 KRBA2Q6ZNG9 492 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 ZNF280BQ86YH2 543 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 RNF168Q8IYW5 571 aaPredicted RBP8.92□□□□□ -0.98
NEDD4-210ENST00000513957 GOLGA5Q8TBA6 731 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 TMEM174Q8WUU8 243 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 POMGNT1Q8WZA1 660 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 HLA-CQ95604 372 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 PAGE5Q96GU1 130 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 TIGD1Q96MW7 591 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 TCF25Q9BQ70 676 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 MSTO1Q9BUK6 570 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 GBP3Q9H0R5 595 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 ZBP1Q9H171 429 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 ASB7Q9H672 318 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 RPF1Q9H9Y2 349 aaKnown RBP8.92□□□□□ -0.98
NEDD4-210ENST00000513957 ENTPD7Q9NQZ7 604 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 EXOC1Q9NV70 894 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 HCSTQ9UBK5 93 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 DNAJB4Q9UDY4 337 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 SERTAD1Q9UHV2 236 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 ADAM28Q9UKQ2 775 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 GDAQ9Y2T3 454 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 DERAQ9Y315 318 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 BRWD1Q9NSI6 2320 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 MYO7AQ13402 2215 aa8.92□□□□□ -0.98
NEDD4-210ENST00000513957 REV3LO60673 3130 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 PRUNE2Q8WUY3 3088 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 SMIM28A0A1B0GU29 152 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 TTC26A0AVF1 554 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 TRAPPC3O43617 180 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 ZNF202O95125 648 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 IL18RAPO95256 599 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 EFEMP2O95967 443 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 URODP06132 367 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 DNAJB1P25685 340 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 RPL9P32969 192 aaKnown RBP8.91□□□□□ -0.98
NEDD4-210ENST00000513957 AFMP43652 599 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 AFF1P51825 1210 aaKnown RBP8.91□□□□□ -0.98
NEDD4-210ENST00000513957 FAM160A1Q05DH4 1040 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 KCNB1Q14721 858 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 CTC1Q2NKJ3 1217 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 TCEAL5Q5H9L2 206 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 SLC39A4Q6P5W5 647 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 EPM2AIP1Q7L775 607 aaPredicted RBP8.91□□□□□ -0.98
NEDD4-210ENST00000513957 HS2ST1Q7LGA3 356 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 TMC7Q7Z402 723 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 ZBTB33Q86T24 672 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 PPFIBP1Q86W92 1011 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.91□□□□□ -0.98
NEDD4-210ENST00000513957 SYCP3Q8IZU3 236 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 FMR1NBQ8N0W7 255 aaPredicted RBP8.91□□□□□ -0.98
NEDD4-210ENST00000513957 VPS52Q8N1B4 723 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 MICALL1Q8N3F8 863 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 EFHBQ8N7U6 833 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 CEP120Q8N960 986 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 MRPL43Q8N983 215 aaKnown RBP8.91□□□□□ -0.98
NEDD4-210ENST00000513957 ZNF507Q8TCN5 953 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 MICAL1Q8TDZ2 1067 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 ADAMTS19Q8TE59 1207 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 HERC2P3Q9BVR0 1158 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 TMEM121BQ9BXQ6 578 aaPredicted RBP8.91□□□□□ -0.98
NEDD4-210ENST00000513957 KIAA1586Q9HCI6 787 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.91□□□□□ -0.98
NEDD4-210ENST00000513957 MARCH5Q9NX47 278 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 MIOSQ9NXC5 875 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 KLK14Q9P0G3 267 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 CPSF3Q9UKF6 684 aaKnown RBP8.91□□□□□ -0.98
NEDD4-210ENST00000513957 AGO2Q9UKV8 859 aaKnown RBP8.91□□□□□ -0.98
NEDD4-210ENST00000513957 UBQLN1Q9UMX0 589 aaKnown RBP8.91□□□□□ -0.98
NEDD4-210ENST00000513957 FAM50BQ9Y247 325 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 USP20Q9Y2K6 914 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 C2CD2Q9Y426 696 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 TSC2P49815 1807 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 UNC80Q8N2C7 3258 aa8.91□□□□□ -0.98
NEDD4-210ENST00000513957 PLXNA3P51805 1871 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms