RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 SLC9A9Q8IVB4 645 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 ZC3H3Q8IXZ2 948 aaKnown RBP12.3□□□□□ -0.44
HTT-213ENST00000513806 FAM186BQ8IYM0 893 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 FIBCD1Q8N539 461 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 CSGALNACT2Q8N6G5 542 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 OR5B17Q8NGF7 314 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 SP7Q8TDD2 431 aaPredicted RBP12.3□□□□□ -0.44
HTT-213ENST00000513806 HASPINQ8TF76 798 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 BCL7CQ8WUZ0 217 aaPredicted RBP12.3□□□□□ -0.44
HTT-213ENST00000513806 PPP1R10Q96QC0 940 aaKnown RBP12.3□□□□□ -0.44
HTT-213ENST00000513806 UBN1Q9NPG3 1134 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 CGNQ9P2M7 1197 aaKnown RBP12.3□□□□□ -0.44
HTT-213ENST00000513806 RWDD2AQ9UIY3 292 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 MSRAQ9UJ68 235 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 PRG3Q9Y2Y8 225 aaPredicted RBP12.3□□□□□ -0.44
HTT-213ENST00000513806 MYO7AQ13402 2215 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 LRRIQ3A6PVS8 624 aaPredicted RBP12.29□□□□□ -0.44
HTT-213ENST00000513806 CETN3O15182 167 aa12.29□□□□□ -0.44
HTT-213ENST00000513806 ITGB1P05556 798 aa12.29□□□□□ -0.44
HTT-213ENST00000513806 THP07101 528 aa12.29□□□□□ -0.44
HTT-213ENST00000513806 OR1G1P47890 313 aa12.29□□□□□ -0.44
HTT-213ENST00000513806 BCAR1P56945 870 aa12.29□□□□□ -0.44
HTT-213ENST00000513806 SNRPFP62306 86 aaKnown RBP12.29□□□□□ -0.44
HTT-213ENST00000513806 TFAMQ00059 246 aaKnown RBP12.29□□□□□ -0.44
HTT-213ENST00000513806 LRRC63Q05C16 580 aa12.29□□□□□ -0.44
HTT-213ENST00000513806 GRIK3Q13003 919 aa12.29□□□□□ -0.44
HTT-213ENST00000513806 TMEM132DQ14C87 1099 aa12.29□□□□□ -0.44
HTT-213ENST00000513806 NFIL3Q16649 462 aa12.29□□□□□ -0.44
HTT-213ENST00000513806 C1orf220Q5T0J3 134 aa12.29□□□□□ -0.44
HTT-213ENST00000513806 PPP2R2DQ66LE6 453 aa12.29□□□□□ -0.44
HTT-213ENST00000513806 COLGALT2Q8IYK4 626 aa12.29□□□□□ -0.44
HTT-213ENST00000513806 LRRC43Q8N309 656 aa12.29□□□□□ -0.44
HTT-213ENST00000513806 AOPEPQ8N6M6 819 aa12.29□□□□□ -0.44
HTT-213ENST00000513806 COLGALT1Q8NBJ5 622 aa12.29□□□□□ -0.44
HTT-213ENST00000513806 ZNF516Q92618 1163 aa12.29□□□□□ -0.44
HTT-213ENST00000513806 TIFAQ96CG3 184 aa12.29□□□□□ -0.44
HTT-213ENST00000513806 MFSD14AQ96MC6 490 aa12.29□□□□□ -0.44
HTT-213ENST00000513806 FAM161BQ96MY7 647 aa12.29□□□□□ -0.44
HTT-213ENST00000513806 FAM193BQ96PV7 902 aaPredicted RBP12.29□□□□□ -0.44
HTT-213ENST00000513806 GTPBP4Q9BZE4 634 aaKnown RBP12.29□□□□□ -0.44
HTT-213ENST00000513806 MTMR12Q9C0I1 747 aa12.29□□□□□ -0.44
HTT-213ENST00000513806 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.29□□□□□ -0.441e-18■■■■■ 447.2
HTT-213ENST00000513806 SAMSN1Q9NSI8 373 aaKnown RBP12.29□□□□□ -0.44
HTT-213ENST00000513806 CDH23Q9H251 3354 aa12.28□□□□□ -0.44
HTT-213ENST00000513806 BICDL2A1A5D9 508 aa12.28□□□□□ -0.44
HTT-213ENST00000513806 KIAA0391O15091 583 aaKnown RBP12.28□□□□□ -0.44
HTT-213ENST00000513806 INPPL1O15357 1258 aa12.28□□□□□ -0.44
HTT-213ENST00000513806 LETM1O95202 739 aaPredicted RBP12.28□□□□□ -0.44
HTT-213ENST00000513806 GALTP07902 379 aa12.28□□□□□ -0.44
HTT-213ENST00000513806 KCNE1P15382 129 aa12.28□□□□□ -0.44
HTT-213ENST00000513806 CTNNB1P35222 781 aa12.28□□□□□ -0.44
HTT-213ENST00000513806 PPP1R2P41236 205 aa12.28□□□□□ -0.44
HTT-213ENST00000513806 CLCNKBP51801 687 aa12.28□□□□□ -0.44
HTT-213ENST00000513806 SMAD3P84022 425 aaKnown RBP12.28□□□□□ -0.44
HTT-213ENST00000513806 FKBP3Q00688 224 aaKnown RBP12.28□□□□□ -0.44
HTT-213ENST00000513806 DSC1Q08554 894 aa12.28□□□□□ -0.44
HTT-213ENST00000513806 PSMD6Q15008 389 aa12.28□□□□□ -0.44
HTT-213ENST00000513806 ZBTB6Q15916 424 aa12.28□□□□□ -0.44
HTT-213ENST00000513806 TPD52L1Q16890 204 aaPredicted RBP12.28□□□□□ -0.44
HTT-213ENST00000513806 LRIT3Q3SXY7 679 aa12.28□□□□□ -0.44
HTT-213ENST00000513806 IRF2BP1Q8IU81 584 aa12.28□□□□□ -0.44
HTT-213ENST00000513806 C3orf58Q8NDZ4 430 aa12.28□□□□□ -0.44
HTT-213ENST00000513806 ARNTL2Q8WYA1 636 aa12.28□□□□□ -0.44
HTT-213ENST00000513806 BORCS6Q96GS4 357 aa12.28□□□□□ -0.44
HTT-213ENST00000513806 MARCH5Q9NX47 278 aa12.28□□□□□ -0.44
HTT-213ENST00000513806 DACH1Q9UI36 760 aa12.28□□□□□ -0.44
HTT-213ENST00000513806 FRMD4BQ9Y2L6 1034 aa12.28□□□□□ -0.44
HTT-213ENST00000513806 TSC2P49815 1807 aa12.27□□□□□ -0.44
HTT-213ENST00000513806 SZT2Q5T011 3432 aa12.27□□□□□ -0.44
HTT-213ENST00000513806 A0A1W2PPC1 479 aa12.27□□□□□ -0.45
HTT-213ENST00000513806 I3L4J1 428 aa12.27□□□□□ -0.45
HTT-213ENST00000513806 NRP1O14786 923 aa12.27□□□□□ -0.45
HTT-213ENST00000513806 LRRN2O75325 713 aa12.27□□□□□ -0.45
HTT-213ENST00000513806 IL18RAPO95256 599 aa12.27□□□□□ -0.45
HTT-213ENST00000513806 CCDC192P0DO97 292 aa12.27□□□□□ -0.45
HTT-213ENST00000513806 EPB41P11171 864 aaKnown RBP12.27□□□□□ -0.45
HTT-213ENST00000513806 TNNI1P19237 187 aa12.27□□□□□ -0.45
HTT-213ENST00000513806 RPL13P26373 211 aaKnown RBP12.27□□□□□ -0.45
HTT-213ENST00000513806 ERCC5P28715 1186 aaPredicted RBP12.27□□□□□ -0.45
HTT-213ENST00000513806 PSMC2P35998 433 aaKnown RBP12.27□□□□□ -0.45
HTT-213ENST00000513806 TUSC3Q13454 348 aa12.27□□□□□ -0.45
HTT-213ENST00000513806 RAB30Q15771 203 aa12.27□□□□□ -0.45
HTT-213ENST00000513806 KYAT1Q16773 422 aa12.27□□□□□ -0.45
HTT-213ENST00000513806 CCDC40Q4G0X9 1142 aa12.27□□□□□ -0.45
HTT-213ENST00000513806 DCAF17Q5H9S7 520 aaPredicted RBP12.27□□□□□ -0.45
HTT-213ENST00000513806 HABP4Q5JVS0 413 aaKnown RBP12.27□□□□□ -0.45
HTT-213ENST00000513806 KCNT2Q6UVM3 1135 aa12.27□□□□□ -0.45
HTT-213ENST00000513806 CD300LGQ6UXG3 332 aa12.27□□□□□ -0.45
HTT-213ENST00000513806 DHX40Q8IX18 779 aaKnown RBP12.27□□□□□ -0.45
HTT-213ENST00000513806 PARD3BQ8TEW8 1205 aa12.27□□□□□ -0.45
HTT-213ENST00000513806 GDPD5Q8WTR4 605 aa12.27□□□□□ -0.45
HTT-213ENST00000513806 CNOT6LQ96LI5 555 aaKnown RBP12.27□□□□□ -0.45
HTT-213ENST00000513806 CGRRF1Q99675 332 aa12.27□□□□□ -0.45
HTT-213ENST00000513806 MRPL9Q9BYD2 267 aaKnown RBP12.27□□□□□ -0.45
HTT-213ENST00000513806 TTYH1Q9H313 450 aaPredicted RBP12.27□□□□□ -0.45
HTT-213ENST00000513806 PLEKHA5Q9HAU0 1116 aa12.27□□□□□ -0.45
HTT-213ENST00000513806 KIAA1586Q9HCI6 787 aa12.27□□□□□ -0.45
HTT-213ENST00000513806 RNF216Q9NWF9 866 aaPredicted RBP12.27□□□□□ -0.45
HTT-213ENST00000513806 NFE2L3Q9Y4A8 694 aa12.27□□□□□ -0.45
HTT-213ENST00000513806 PODXLO00592 558 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms