RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.2□□□□□ -1.1
CLCN3-209ENST00000513761 CALB1P05937 261 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 GNAT1P11488 350 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 PHEXP78562 749 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 NLRP9Q7RTR0 991 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 SPDYE1Q8NFV5 336 aaPredicted RBP8.2□□□□□ -1.1
CLCN3-209ENST00000513761 HDAC11Q96DB2 347 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 PPP1R36Q96LQ0 422 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 PAGR1Q9BTK6 254 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 WWP1Q9H0M0 922 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 MRPL46Q9H2W6 279 aaKnown RBP8.2□□□□□ -1.1
CLCN3-209ENST00000513761 AFG3L2Q9Y4W6 797 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 KNDC1Q76NI1 1749 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 RIPK2O43353 540 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 EEF1B2P24534 225 aaKnown RBP8.2□□□□□ -1.1
CLCN3-209ENST00000513761 QPCTQ16769 361 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 CEP55Q53EZ4 464 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 ARHGAP27Q6ZUM4 889 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 EEPD1Q7L9B9 569 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 KCNK18Q7Z418 384 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 YTHDF3Q7Z739 585 aaKnown RBP8.2□□□□□ -1.1
CLCN3-209ENST00000513761 ARHGAP18Q8N392 663 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 GABPB2Q8TAK5 448 aaPredicted RBP8.2□□□□□ -1.1
CLCN3-209ENST00000513761 TATDN2Q93075 761 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 MIEF2Q96C03 454 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 MED10Q9BTT4 135 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 SUDS3Q9H7L9 328 aaPredicted RBP8.2□□□□□ -1.1
CLCN3-209ENST00000513761 TUFT1Q9NNX1 390 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 AGPAT3Q9NRZ7 376 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 PARVAQ9NVD7 372 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 UBE4BO95155 1302 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 MEGF6O75095 1541 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 AGPSO00116 658 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 FNTAP49354 379 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 PSMC1P62191 440 aaKnown RBP8.2□□□□□ -1.1
CLCN3-209ENST00000513761 MED21Q13503 144 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 SF3B3Q15393 1217 aaKnown RBP8.2□□□□□ -1.1
CLCN3-209ENST00000513761 AADACL2Q6P093 401 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 MIS18BP1Q6P0N0 1132 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 AGAP11Q8TF27 550 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 MTBPQ96DY7 904 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 MAGEB18Q96M61 343 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 RXFP1Q9HBX9 757 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 IL17RBQ9NRM6 502 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 BLOC1S4Q9NUP1 217 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 HEY2Q9UBP5 337 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 DAGLAQ9Y4D2 1042 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 ATXN3P54252 364 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-209ENST00000513761 SNRNP35Q16560 246 aaKnown RBP8.19□□□□□ -1.1
CLCN3-209ENST00000513761 SWT1Q5T5J6 900 aaKnown RBP8.19□□□□□ -1.1
CLCN3-209ENST00000513761 ANO5Q75V66 913 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 KAT2BQ92831 832 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 APOL6Q9BWW8 343 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 SLC38A10Q9HBR0 1119 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 LMTK3Q96Q04 1460 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 ESYT2A0FGR8 921 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 HNRNPCL1O60812 293 aaKnown RBP8.19□□□□□ -1.1
CLCN3-209ENST00000513761 IFRD2Q12894 506 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-209ENST00000513761 GIT2Q14161 759 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 EPHA7Q15375 998 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 TAF1BQ53T94 588 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-209ENST00000513761 NT5DC3Q86UY8 548 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 ATXN7L3BQ96GX2 97 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 NSL1Q96IY1 281 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 EFHD1Q9BUP0 239 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 METTL5Q9NRN9 209 aaKnown RBP8.19□□□□□ -1.1
CLCN3-209ENST00000513761 PCDHGC5Q9Y5F6 944 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 DDX3XO00571 662 aaKnown RBP eCLIP8.19□□□□□ -1.12e-11■■■□□ 15.3
CLCN3-209ENST00000513761 TTC4O95801 387 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 PSAPP07602 524 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 CASP2P42575 452 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 EIF3EP60228 445 aaKnown RBP8.19□□□□□ -1.1
CLCN3-209ENST00000513761 PSMC6P62333 389 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 ZNF668Q96K58 619 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-209ENST00000513761 RMDN3Q96TC7 470 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 MANSC1Q9H8J5 431 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 XAB2Q9HCS7 855 aaKnown RBP8.19□□□□□ -1.1
CLCN3-209ENST00000513761 RPS6KA4O75676 772 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 DNAJC8O75937 253 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-209ENST00000513761 ARL4AP40617 200 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 KCNJ2P63252 427 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 ROR1Q01973 937 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 CYTH1Q15438 398 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 SLC27A3Q5K4L6 730 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 MTDHQ86UE4 582 aaKnown RBP8.19□□□□□ -1.1
CLCN3-209ENST00000513761 SHCBP1LQ9BZQ2 653 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 RAVER2Q9HCJ3 691 aaKnown RBP8.19□□□□□ -1.1
CLCN3-209ENST00000513761 ZNF263O14978 683 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 HNRNPCP07910 306 aaKnown RBP eCLIP8.19□□□□□ -1.1
CLCN3-209ENST00000513761 ACOT2P49753 483 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 ITKQ08881 620 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 COG2Q14746 738 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 BTNL9Q6UXG8 535 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 CD302Q8IX05 232 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 GPD1LQ8N335 351 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 MCEEQ96PE7 176 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 ZNF341Q9BYN7 854 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 TRPV6Q9H1D0 765 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 GABBR1Q9UBS5 961 aa8.19□□□□□ -1.1
CLCN3-209ENST00000513761 APOEP02649 317 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms