RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 KLK14Q9P0G3 267 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 DERAQ9Y315 318 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 C2CD2Q9Y426 696 aa13.58□□□□□ -0.24
PDPN-210ENST00000513143 PTPRJQ12913 1337 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 FNDC1Q4ZHG4 1894 aaPredicted RBP13.57□□□□□ -0.24
PDPN-210ENST00000513143 PTPRSQ13332 1948 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 SMIM28A0A1B0GU29 152 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 LGALS16A8MUM7 142 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 PMM2O15305 246 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 OFD1O75665 1012 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 TNNI1P19237 187 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 MLH1P40692 756 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 MRE11P49959 708 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 UBASH3AP57075 661 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 NR1I3Q14994 352 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 ZBTB6Q15916 424 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 TMEM240Q5SV17 173 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 JADE1Q6IE81 842 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 PSRC1Q6PGN9 363 aaPredicted RBP13.57□□□□□ -0.24
PDPN-210ENST00000513143 ZNF365Q70YC5 407 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 NPAS4Q8IUM7 802 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 EFCAB13Q8IY85 973 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 RNF169Q8NCN4 708 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 GSTCDQ8NEC7 633 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 ZMAT2Q96NC0 199 aaKnown RBP13.57□□□□□ -0.24
PDPN-210ENST00000513143 GAD1Q99259 594 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 RTN4Q9NQC3 1192 aaKnown RBP13.57□□□□□ -0.24
PDPN-210ENST00000513143 RNF19AQ9NV58 838 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 INTS13Q9NVM9 706 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 IFNKQ9P0W0 207 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 PCDHB7Q9Y5E2 793 aa13.57□□□□□ -0.24
PDPN-210ENST00000513143 ARL5CA6NH57 179 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 TULP1O00294 542 aaPredicted RBP13.56□□□□□ -0.24
PDPN-210ENST00000513143 PTGESO14684 152 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 P4HA2O15460 535 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 N4BP1O75113 896 aaKnown RBP13.56□□□□□ -0.24
PDPN-210ENST00000513143 C4BPAP04003 597 aaKnown RBP13.56□□□□□ -0.24
PDPN-210ENST00000513143 NFICP08651 508 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 IBSPP21815 317 aaPredicted RBP13.56□□□□□ -0.24
PDPN-210ENST00000513143 GCLMP48507 274 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 FMO5P49326 533 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 RGS19P49795 217 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 WDR5P61964 334 aaKnown RBP13.56□□□□□ -0.24
PDPN-210ENST00000513143 PLCB2Q00722 1185 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 TMEM132DQ14C87 1099 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 DUOXA2Q1HG44 320 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 CBWD6Q4V339 395 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 CBWD3Q5JTY5 395 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 CLLU1OSQ5K130 101 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 CBWD5Q5RIA9 395 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 LMBRD2Q68DH5 695 aaPredicted RBP13.56□□□□□ -0.24
PDPN-210ENST00000513143 C15orf39Q6ZRI6 1047 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 SV2AQ7L0J3 742 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 OTOP2Q7RTS6 562 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 OR5B17Q8NGF7 314 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 CACTINQ8WUQ7 758 aaKnown RBP13.56□□□□□ -0.24
PDPN-210ENST00000513143 KIF12Q96FN5 646 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 ZFP42Q96MM3 310 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.56□□□□□ -0.24
PDPN-210ENST00000513143 XPO4Q9C0E2 1151 aaKnown RBP13.56□□□□□ -0.24
PDPN-210ENST00000513143 TMEM117Q9H0C3 514 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 TMEM8AQ9HCN3 771 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 MIOSQ9NXC5 875 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 LRFN2Q9ULH4 789 aa13.56□□□□□ -0.24
PDPN-210ENST00000513143 PES1O00541 588 aaKnown RBP13.55□□□□□ -0.24
PDPN-210ENST00000513143 TEX33O43247 280 aa13.55□□□□□ -0.24
PDPN-210ENST00000513143 HOXA2O43364 376 aa13.55□□□□□ -0.24
PDPN-210ENST00000513143 CBFA2T2O43439 604 aa13.55□□□□□ -0.24
PDPN-210ENST00000513143 AMHP03971 560 aa13.55□□□□□ -0.24
PDPN-210ENST00000513143 FGFR1P11362 822 aa13.55□□□□□ -0.24
PDPN-210ENST00000513143 AFF1P51825 1210 aaKnown RBP13.55□□□□□ -0.24
PDPN-210ENST00000513143 TFAMQ00059 246 aaKnown RBP13.55□□□□□ -0.24
PDPN-210ENST00000513143 ZACNQ401N2 412 aa13.55□□□□□ -0.24
PDPN-210ENST00000513143 FKBP15Q5T1M5 1219 aa13.55□□□□□ -0.24
PDPN-210ENST00000513143 KRT39Q6A163 491 aa13.55□□□□□ -0.24
PDPN-210ENST00000513143 GLB1LQ6UWU2 654 aa13.55□□□□□ -0.24
PDPN-210ENST00000513143 RSPH1Q8WYR4 309 aa13.55□□□□□ -0.24
PDPN-210ENST00000513143 HERVK_113Q902F9 699 aa13.55□□□□□ -0.24
PDPN-210ENST00000513143 TOP1MTQ969P6 601 aa13.55□□□□□ -0.24
PDPN-210ENST00000513143 ANKRD36BP1Q96IX9 119 aa13.55□□□□□ -0.24
PDPN-210ENST00000513143 DCBLD2Q96PD2 775 aa13.55□□□□□ -0.24
PDPN-210ENST00000513143 PPP1R10Q96QC0 940 aaKnown RBP13.55□□□□□ -0.24
PDPN-210ENST00000513143 RPS6KC1Q96S38 1066 aa13.55□□□□□ -0.24
PDPN-210ENST00000513143 TRIM5Q9C035 493 aa13.55□□□□□ -0.24
PDPN-210ENST00000513143 MTMR12Q9C0I1 747 aa13.55□□□□□ -0.24
PDPN-210ENST00000513143 MMRN2Q9H8L6 949 aa13.55□□□□□ -0.24
PDPN-210ENST00000513143 COQ4Q9Y3A0 265 aa13.55□□□□□ -0.24
PDPN-210ENST00000513143 GTPBP10A4D1E9 387 aaKnown RBP13.54□□□□□ -0.24
PDPN-210ENST00000513143 XPOTO43592 962 aaKnown RBP13.54□□□□□ -0.24
PDPN-210ENST00000513143 TNNC2P02585 160 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 TPM3P06753 285 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 THP07101 528 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 TMEM191BP0C7N4 346 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 CYP3A5P20815 502 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 KCNJ6P48051 423 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 MXI1P50539 228 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 SCNN1GP51170 649 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 DEFB103AP81534 67 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 MYL7Q01449 175 aa13.54□□□□□ -0.24
PDPN-210ENST00000513143 UBXN1Q04323 297 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms