RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 TBX20Q9UMR3 447 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 NR2E1Q9Y466 385 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 NUB1Q9Y5A7 615 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 IRAK3Q9Y616 596 aa7.11□□□□□ -1.27
KDM3B-208ENST00000512928 ZNF318Q5VUA4 2279 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.1□□□□□ -1.27
KDM3B-208ENST00000512928 SMIM28A0A1B0GU29 152 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 C19orf67A6NJJ6 358 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 PODXLO00592 558 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 SPTLC2O15270 562 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 TRAPPC3O43617 180 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 GCNT3O95395 438 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 F13A1P00488 732 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 CXCL8P10145 99 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 PRKCSHP14314 528 aaPredicted RBP7.1□□□□□ -1.27
KDM3B-208ENST00000512928 PROZP22891 400 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 MTHFRP42898 656 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 ME1P48163 572 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 NASPP49321 788 aaPredicted RBP7.1□□□□□ -1.27
KDM3B-208ENST00000512928 MRE11P49959 708 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 NHLH1Q02575 133 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 CREMQ03060 361 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 PPP2R3AQ06190 1150 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 ELAVL2Q12926 359 aaKnown RBP7.1□□□□□ -1.27
KDM3B-208ENST00000512928 PKP1Q13835 747 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 PSMD5Q16401 504 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 ZC2HC1CQ53FD0 456 aaPredicted RBP7.1□□□□□ -1.27
KDM3B-208ENST00000512928 KIAA0319Q5VV43 1072 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 DCLRE1AQ6PJP8 1040 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 HFE2Q6ZVN8 426 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 SFR1Q86XK3 245 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 SLC22A17Q8WUG5 538 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 DDX12PQ92771 950 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 C18orf25Q96B23 403 aaPredicted RBP7.1□□□□□ -1.27
KDM3B-208ENST00000512928 UROC1Q96N76 676 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 NECTIN4Q96NY8 510 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 PPP1R10Q96QC0 940 aaKnown RBP7.1□□□□□ -1.27
KDM3B-208ENST00000512928 NTPCRQ9BSD7 190 aaKnown RBP7.1□□□□□ -1.27
KDM3B-208ENST00000512928 MSTO1Q9BUK6 570 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 POMKQ9H5K3 350 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 PTPRHQ9HD43 1115 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.1□□□□□ -1.27
KDM3B-208ENST00000512928 DPP7Q9UHL4 492 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 POLIQ9UNA4 740 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 TECTAO75443 2155 aa7.1□□□□□ -1.27
KDM3B-208ENST00000512928 CCDC195A0A1B0GUA6 201 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 MYMKA6NI61 221 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 LOC730098B7Z3J9 87 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 TGM5O43548 720 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 LILRB3O75022 631 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 RFPL2O75678 378 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 CLTAP09496 248 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 SCP2P22307 547 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 TKTP29401 623 aaKnown RBP7.09□□□□□ -1.27
KDM3B-208ENST00000512928 ABCD1P33897 745 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 MCM4P33991 863 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 TNFSF9P41273 254 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 BRCC3P46736 316 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 ZNF131P52739 623 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 ARPP19P56211 112 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 SOX4Q06945 474 aaPredicted RBP7.09□□□□□ -1.27
KDM3B-208ENST00000512928 MCL1Q07820 350 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 BECN1Q14457 450 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 NAB2Q15742 525 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 UPP1Q16831 310 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 HERC4Q5GLZ8 1057 aaPredicted RBP7.09□□□□□ -1.27
KDM3B-208ENST00000512928 IER5LQ5T953 404 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 LIN9Q5TKA1 542 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 ADALQ6DHV7 355 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 PDXDC1Q6P996 788 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 CCDC149Q6ZUS6 474 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 RNF168Q8IYW5 571 aaPredicted RBP7.09□□□□□ -1.27
KDM3B-208ENST00000512928 SYCP3Q8IZU3 236 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 TDRD5Q8NAT2 981 aaKnown RBP7.09□□□□□ -1.27
KDM3B-208ENST00000512928 LINC00301Q8NCQ3 95 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 FEZF2Q8TBJ5 459 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 SUSD6Q92537 303 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 STAMQ92783 540 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 DHX58Q96C10 678 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 KIF12Q96FN5 646 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 DDX27Q96GQ7 796 aaKnown RBP7.09□□□□□ -1.27
KDM3B-208ENST00000512928 ZMAT2Q96NC0 199 aaKnown RBP7.09□□□□□ -1.27
KDM3B-208ENST00000512928 RPF1Q9H9Y2 349 aaKnown RBP7.09□□□□□ -1.27
KDM3B-208ENST00000512928 CHST7Q9NS84 486 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 PANK4Q9NVE7 773 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 FAM86C1Q9NVL1 165 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 CNTN3Q9P232 1028 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 TUBGCP4Q9UGJ1 667 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 CIZ1Q9ULV3 898 aaPredicted RBP7.09□□□□□ -1.27
KDM3B-208ENST00000512928 MYH11P35749 1972 aa7.09□□□□□ -1.27
KDM3B-208ENST00000512928 A0A087X0B3 334 aa7.08□□□□□ -1.28
KDM3B-208ENST00000512928 PRR33A8MZF0 331 aa7.08□□□□□ -1.28
KDM3B-208ENST00000512928 C2CD4DB7Z1M9 353 aa7.08□□□□□ -1.28
KDM3B-208ENST00000512928 TISP43B9A030 160 aa7.08□□□□□ -1.28
KDM3B-208ENST00000512928 ANKRD63C9JTQ0 380 aa7.08□□□□□ -1.28
KDM3B-208ENST00000512928 ABLIM1O14639 778 aa7.08□□□□□ -1.28
KDM3B-208ENST00000512928 OGTO15294 1046 aa7.08□□□□□ -1.28
KDM3B-208ENST00000512928 CUTAO60888 179 aa7.08□□□□□ -1.28
KDM3B-208ENST00000512928 PPP6R2O75170 966 aa7.08□□□□□ -1.28
KDM3B-208ENST00000512928 YEATS4O95619 227 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms