RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 IPO13O94829 963 aaKnown RBP5.24□□□□□ -1.57
HTT-210ENST00000512909 SNRPA1P09661 255 aaKnown RBP5.24□□□□□ -1.57
HTT-210ENST00000512909 MYBP10242 640 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 MTHFD1P11586 935 aaKnown RBP5.24□□□□□ -1.57
HTT-210ENST00000512909 ATP5JP18859 108 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 SREBF1P36956 1147 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 GNALP38405 381 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 CACNB3P54284 484 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 SP140Q13342 867 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 GRM7Q14831 915 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 TBR1Q16650 682 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 FKBP15Q5T1M5 1219 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 DARS2Q6PI48 645 aaKnown RBP5.24□□□□□ -1.57
HTT-210ENST00000512909 FAM111BQ6SJ93 734 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 SRGAP1Q7Z6B7 1085 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 FAM83AQ86UY5 434 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 CIR1Q86X95 450 aaPredicted RBP5.24□□□□□ -1.57
HTT-210ENST00000512909 GSPT2Q8IYD1 628 aaKnown RBP5.24□□□□□ -1.57
HTT-210ENST00000512909 D2HGDHQ8N465 521 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 SH2D3CQ8N5H7 860 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 SYT8Q8NBV8 401 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 FBXO18Q8NFZ0 1043 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 FEZF2Q8TBJ5 459 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 RAB24Q969Q5 203 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 MBD6Q96DN6 1003 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 TAAR9Q96RI9 348 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 ACO2Q99798 780 aaKnown RBP5.24□□□□□ -1.57
HTT-210ENST00000512909 CPPED1Q9BRF8 314 aaPredicted RBP5.24□□□□□ -1.57
HTT-210ENST00000512909 PDCD2LQ9BRP1 358 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 REXO4Q9GZR2 422 aaKnown RBP5.24□□□□□ -1.57
HTT-210ENST00000512909 SPON1Q9HCB6 807 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 ANLNQ9NQW6 1124 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 CALCOCO1Q9P1Z2 691 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 IPPQ9Y573 584 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 PCDHA3Q9Y5H8 950 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 NR2E3Q9Y5X4 410 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 ZMYM3Q14202 1370 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 NCOA2Q15596 1464 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 PLEKHH2Q8IVE3 1493 aa5.24□□□□□ -1.57
HTT-210ENST00000512909 ARID1BQ8NFD5 2236 aaPredicted RBP5.23□□□□□ -1.57
HTT-210ENST00000512909 PMS2P1A4D2B8 440 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 CAPN8A6NHC0 703 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 FAM227AF5H4B4 570 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 H3BML4 177 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 KIAA0391O15091 583 aaKnown RBP5.23□□□□□ -1.57
HTT-210ENST00000512909 TRIM13O60858 407 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 UBXN7O94888 489 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 ALAS1P13196 640 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 HTR1BP28222 390 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 FLT3LGP49771 235 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 RAP2BP61225 183 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 HGFACQ04756 655 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 PICALMQ13492 652 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 SEPT2Q15019 361 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 KHDC1Q4VXA5 237 aaKnown RBP5.23□□□□□ -1.57
HTT-210ENST00000512909 PRAMEF14Q5SWL7 426 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 SGMS1Q86VZ5 419 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 SIAH1Q8IUQ4 282 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 REPS2Q8NFH8 660 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 BRIX1Q8TDN6 353 aaKnown RBP5.23□□□□□ -1.57
HTT-210ENST00000512909 CASKIN2Q8WXE0 1202 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 CGRRF1Q99675 332 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 PACSIN1Q9BY11 444 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 WDCPQ9H6R7 721 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 ARMT1Q9H993 441 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 POGKQ9P215 609 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 TRPS1Q9UHF7 1281 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 DHX29Q7Z478 1369 aaKnown RBP5.23□□□□□ -1.57
HTT-210ENST00000512909 LRRC9Q6ZRR7 1453 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 KIAA1107Q9UPP5 1409 aa5.23□□□□□ -1.57
HTT-210ENST00000512909 FRMPD1Q5SYB0 1578 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 A2MP01023 1474 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 MLH3Q9UHC1 1453 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 A0A1W2PPL8 197 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 B5MCH6 92 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 ADCY6O43306 1168 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 CNOT4O95628 575 aaKnown RBP5.22□□□□□ -1.57
HTT-210ENST00000512909 KCNJ5P48544 419 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 EPHB4P54760 987 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 FGL2Q14314 439 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 GBX1Q14549 363 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 LLGL1Q15334 1064 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 KIAA0753Q2KHM9 967 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 KRTAP19-4Q3LI73 84 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 COBLL1Q53SF7 1204 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 FAM47AQ5JRC9 791 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 EFCAB12Q6NXP0 572 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 Q6ZVL8 140 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 HEATR3Q7Z4Q2 680 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 FRMD5Q7Z6J6 570 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 TRMT2AQ8IZ69 625 aaKnown RBP5.22□□□□□ -1.57
HTT-210ENST00000512909 ANKRD35Q8N283 1001 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 PRR18Q8N4B5 295 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 NLGN4YQ8NFZ3 816 aaPredicted RBP5.22□□□□□ -1.57
HTT-210ENST00000512909 OR2I1PQ8NGU4 316 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 ZFP28Q8NHY6 868 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 KLHDC4Q8TBB5 520 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 GPHA2Q96T91 129 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 MPHOSPH9Q99550 1183 aa5.22□□□□□ -1.57
HTT-210ENST00000512909 VRK1Q99986 396 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms