RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 RSPRY1Q96DX4 576 aa10.55□□□□□ -0.72
CLCN3-208ENST00000512813 CAMK1GQ96NX5 476 aa10.55□□□□□ -0.72
CLCN3-208ENST00000512813 TMEM209Q96SK2 561 aa10.55□□□□□ -0.72
CLCN3-208ENST00000512813 TTPALQ9BTX7 342 aa10.55□□□□□ -0.72
CLCN3-208ENST00000512813 INO80BQ9C086 356 aaPredicted RBP10.55□□□□□ -0.72
CLCN3-208ENST00000512813 AGO4Q9HCK5 861 aaKnown RBP10.55□□□□□ -0.72
CLCN3-208ENST00000512813 UBN1Q9NPG3 1134 aa10.55□□□□□ -0.72
CLCN3-208ENST00000512813 POLR3BQ9NW08 1133 aaPredicted RBP10.55□□□□□ -0.72
CLCN3-208ENST00000512813 GTSE1Q9NYZ3 720 aa10.55□□□□□ -0.72
CLCN3-208ENST00000512813 ANKMY1Q9P2S6 941 aa10.55□□□□□ -0.72
CLCN3-208ENST00000512813 PCDHB9Q9Y5E1 797 aa10.55□□□□□ -0.72
CLCN3-208ENST00000512813 GOLGA4Q13439 2230 aaKnown RBP10.54□□□□□ -0.72
CLCN3-208ENST00000512813 ARL5CA6NH57 179 aa10.54□□□□□ -0.72
CLCN3-208ENST00000512813 TNFRSF10BO14763 440 aa10.54□□□□□ -0.72
CLCN3-208ENST00000512813 SH3BP5O60239 455 aa10.54□□□□□ -0.72
CLCN3-208ENST00000512813 SMARCA5O60264 1052 aaPredicted RBP10.54□□□□□ -0.72
CLCN3-208ENST00000512813 C6P13671 934 aa10.54□□□□□ -0.72
CLCN3-208ENST00000512813 HOXD12P35452 270 aa10.54□□□□□ -0.72
CLCN3-208ENST00000512813 SCNN1GP51170 649 aa10.54□□□□□ -0.72
CLCN3-208ENST00000512813 SLC14A1Q13336 389 aa10.54□□□□□ -0.72
CLCN3-208ENST00000512813 TAF1BQ53T94 588 aaPredicted RBP10.54□□□□□ -0.72
CLCN3-208ENST00000512813 TMEM196Q5HYL7 178 aa10.54□□□□□ -0.72
CLCN3-208ENST00000512813 PEAR1Q5VY43 1037 aaPredicted RBP10.54□□□□□ -0.72
CLCN3-208ENST00000512813 PDZD4Q76G19 769 aaPredicted RBP10.54□□□□□ -0.72
CLCN3-208ENST00000512813 CATSPER4Q7RTX7 472 aa10.54□□□□□ -0.72
CLCN3-208ENST00000512813 SLCO6A1Q86UG4 719 aa10.54□□□□□ -0.72
CLCN3-208ENST00000512813 SPIRE2Q8WWL2 714 aa10.54□□□□□ -0.72
CLCN3-208ENST00000512813 FAM167AQ96KS9 214 aa10.54□□□□□ -0.72
CLCN3-208ENST00000512813 CORO1BQ9BR76 489 aa10.54□□□□□ -0.72
CLCN3-208ENST00000512813 GTPBP2Q9BX10 602 aaKnown RBP10.54□□□□□ -0.72
CLCN3-208ENST00000512813 SEMA4CQ9C0C4 833 aa10.54□□□□□ -0.72
CLCN3-208ENST00000512813 TMEM74BQ9NUR3 256 aa10.54□□□□□ -0.72
CLCN3-208ENST00000512813 DNAAF2Q9NVR5 837 aaKnown RBP10.54□□□□□ -0.72
CLCN3-208ENST00000512813 NXF1Q9UBU9 619 aaKnown RBP10.54□□□□□ -0.72
CLCN3-208ENST00000512813 IL17BQ9UHF5 180 aa10.54□□□□□ -0.72
CLCN3-208ENST00000512813 INVSQ9Y283 1065 aa10.54□□□□□ -0.72
CLCN3-208ENST00000512813 SALL3Q9BXA9 1300 aa10.54□□□□□ -0.72
CLCN3-208ENST00000512813 ADAMTS9Q9P2N4 1935 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 A0A087WZ62 844 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 ARHGEF37A1IGU5 675 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 E9PAM4 449 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 DDX39AO00148 427 aaKnown RBP10.53□□□□□ -0.72
CLCN3-208ENST00000512813 RNF40O75150 1001 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 LRG1P02750 347 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 MLH1P40692 756 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 SPIRE1Q08AE8 756 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 GRM4Q14833 912 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 UBXN11Q5T124 520 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 IFIT1BQ5T764 474 aaKnown RBP10.53□□□□□ -0.72
CLCN3-208ENST00000512813 FSTL4Q6MZW2 842 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 ZNF746Q6NUN9 644 aaPredicted RBP10.53□□□□□ -0.72
CLCN3-208ENST00000512813 SYT13Q7L8C5 426 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 TRMT1LQ7Z2T5 733 aaKnown RBP10.53□□□□□ -0.72
CLCN3-208ENST00000512813 ZNF410Q86VK4 478 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 FMNL3Q8IVF7 1028 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 NAXDQ8IW45 347 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 MINDY1Q8N5J2 469 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 PDCD7Q8N8D1 485 aaKnown RBP10.53□□□□□ -0.72
CLCN3-208ENST00000512813 DAGLBQ8NCG7 672 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 TTC8Q8TAM2 541 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 GAD1Q99259 594 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 FDXACB1Q9BRP7 624 aaPredicted RBP10.53□□□□□ -0.72
CLCN3-208ENST00000512813 PI4K2AQ9BTU6 479 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 NBPF19A0A087WUL8 3843 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 GON4LQ3T8J9 2241 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 AHCTF1Q8WYP5 2266 aa10.53□□□□□ -0.72
CLCN3-208ENST00000512813 SPDYE3A6NKU9 549 aa10.52□□□□□ -0.73
CLCN3-208ENST00000512813 MOSPD3O75425 235 aa10.52□□□□□ -0.73
CLCN3-208ENST00000512813 TADA2AO75478 443 aa10.52□□□□□ -0.73
CLCN3-208ENST00000512813 CFIP05156 583 aa10.52□□□□□ -0.73
CLCN3-208ENST00000512813 ITGA4P13612 1032 aa10.52□□□□□ -0.73
CLCN3-208ENST00000512813 OR1D2P34982 312 aa10.52□□□□□ -0.73
CLCN3-208ENST00000512813 IL12RB1P42701 662 aa10.52□□□□□ -0.73
CLCN3-208ENST00000512813 DGKEP52429 567 aa10.52□□□□□ -0.73
CLCN3-208ENST00000512813 GFPT1Q06210 699 aaPredicted RBP10.52□□□□□ -0.73
CLCN3-208ENST00000512813 GRSF1Q12849 480 aaKnown RBP eCLIP10.52□□□□□ -0.73
CLCN3-208ENST00000512813 DRP2Q13474 957 aa10.52□□□□□ -0.73
CLCN3-208ENST00000512813 ARHGAP29Q52LW3 1261 aa10.52□□□□□ -0.73
CLCN3-208ENST00000512813 GALNT15Q8N3T1 639 aa10.52□□□□□ -0.73
CLCN3-208ENST00000512813 SMG8Q8ND04 991 aaKnown RBP10.52□□□□□ -0.73
CLCN3-208ENST00000512813 CNNM3Q8NE01 707 aa10.52□□□□□ -0.73
CLCN3-208ENST00000512813 ZFP42Q96MM3 310 aa10.52□□□□□ -0.73
CLCN3-208ENST00000512813 KIF2CQ99661 725 aa10.52□□□□□ -0.73
CLCN3-208ENST00000512813 FSCN3Q9NQT6 498 aa10.52□□□□□ -0.73
CLCN3-208ENST00000512813 MIOSQ9NXC5 875 aa10.52□□□□□ -0.73
CLCN3-208ENST00000512813 SNTG2Q9NY99 539 aa10.52□□□□□ -0.73
CLCN3-208ENST00000512813 SLC6A14Q9UN76 642 aa10.52□□□□□ -0.73
CLCN3-208ENST00000512813 STK24Q9Y6E0 443 aa10.52□□□□□ -0.73
CLCN3-208ENST00000512813 KIAA1549LQ6ZVL6 1849 aa10.51□□□□□ -0.73
CLCN3-208ENST00000512813 UTP20O75691 2785 aaKnown RBP10.51□□□□□ -0.73
CLCN3-208ENST00000512813 RRP8O43159 456 aaKnown RBP10.51□□□□□ -0.73
CLCN3-208ENST00000512813 GJB3O75712 270 aa10.51□□□□□ -0.73
CLCN3-208ENST00000512813 DKK1O94907 266 aa10.51□□□□□ -0.73
CLCN3-208ENST00000512813 DMC1Q14565 340 aa10.51□□□□□ -0.73
CLCN3-208ENST00000512813 HSP90AA2PQ14568 343 aaPredicted RBP10.51□□□□□ -0.73
CLCN3-208ENST00000512813 UBE2SQ16763 222 aa10.51□□□□□ -0.73
CLCN3-208ENST00000512813 CEP55Q53EZ4 464 aa10.51□□□□□ -0.73
CLCN3-208ENST00000512813 FAM171A1Q5VUB5 890 aa10.51□□□□□ -0.73
CLCN3-208ENST00000512813 LPCAT2Q7L5N7 544 aa10.51□□□□□ -0.73
CLCN3-208ENST00000512813 HAUS6Q7Z4H7 955 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms