RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 PASD1Q8IV76 773 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 BBOF1Q8ND07 529 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 INPP5DQ92835 1189 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 ATP6V1E2Q96A05 226 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 NUDT12Q9BQG2 462 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 DDX47Q9H0S4 455 aaKnown RBP11.46□□□□□ -0.57
CPNE4-209ENST00000512055 NOD1Q9Y239 953 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 AFDNP55196 1824 aaKnown RBP11.46□□□□□ -0.58
CPNE4-209ENST00000512055 DIAPH2O60879 1101 aa11.46□□□□□ -0.58
CPNE4-209ENST00000512055 HDLBPQ00341 1268 aaKnown RBP11.46□□□□□ -0.58
CPNE4-209ENST00000512055 MCPH1Q8NEM0 835 aa11.46□□□□□ -0.58
CPNE4-209ENST00000512055 SPATA4Q8NEY3 305 aa11.46□□□□□ -0.58
CPNE4-209ENST00000512055 NEUROG2Q9H2A3 272 aa11.46□□□□□ -0.58
CPNE4-209ENST00000512055 DLGAP3O95886 979 aa11.46□□□□□ -0.58
CPNE4-209ENST00000512055 KLC1Q07866 573 aa11.46□□□□□ -0.58
CPNE4-209ENST00000512055 TBL3Q12788 808 aaKnown RBP11.46□□□□□ -0.58
CPNE4-209ENST00000512055 STX3Q13277 289 aa11.46□□□□□ -0.58
CPNE4-209ENST00000512055 LMBRD2Q68DH5 695 aaPredicted RBP11.46□□□□□ -0.58
CPNE4-209ENST00000512055 APOBEC3HQ6NTF7 200 aaKnown RBP11.46□□□□□ -0.58
CPNE4-209ENST00000512055 DEFB132Q7Z7B7 95 aa11.46□□□□□ -0.58
CPNE4-209ENST00000512055 NOA1Q8NC60 698 aaKnown RBP11.46□□□□□ -0.58
CPNE4-209ENST00000512055 CDKL2Q92772 493 aa11.46□□□□□ -0.58
CPNE4-209ENST00000512055 PPARGC1AQ9UBK2 798 aaKnown RBP11.46□□□□□ -0.58
CPNE4-209ENST00000512055 SNX12Q9UMY4 172 aa11.46□□□□□ -0.58
CPNE4-209ENST00000512055 ARHGAP26Q9UNA1 814 aa11.46□□□□□ -0.58
CPNE4-209ENST00000512055 RASGRF2O14827 1237 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 FTLP02792 175 aaPredicted RBP11.45□□□□□ -0.58
CPNE4-209ENST00000512055 OCRLQ01968 901 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 TFDP1Q14186 410 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 NCLNQ969V3 563 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 EDEM3Q9BZQ6 932 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 TRIM15Q9C019 465 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 TMEM245Q9H330 911 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 SYBUQ9NX95 663 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 PCDHAC2Q9Y5I4 1007 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 MORC2Q9Y6X9 1032 aaPredicted RBP11.45□□□□□ -0.58
CPNE4-209ENST00000512055 CHD2O14647 1828 aaKnown RBP11.45□□□□□ -0.58
CPNE4-209ENST00000512055 TRIM66O15016 1216 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 MMEP08473 750 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 KCNA3P22001 575 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 DR1Q01658 176 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 BTKQ06187 659 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 PLA2G4FQ68DD2 849 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 ELMSAN1Q6PJG2 1045 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 RFX8Q6ZV50 586 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 FAM47EQ6ZV65 393 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 PLD3Q8IV08 490 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 TAGAPQ8N103 731 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 LRRC1Q9BTT6 524 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 RUSC1Q9BVN2 902 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 PCDHA10Q9Y5I2 948 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 GMEB1Q9Y692 573 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 ATRNO75882 1429 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 TCHHQ07283 1943 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 SFNP31947 248 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 IREB2P48200 963 aaKnown RBP11.45□□□□□ -0.58
CPNE4-209ENST00000512055 SLC18A3Q16572 532 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 CYP2W1Q8TAV3 490 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 SKA2Q8WVK7 121 aaPredicted RBP11.45□□□□□ -0.58
CPNE4-209ENST00000512055 FAM161BQ96MY7 647 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 ERGIC2Q96RQ1 377 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 DNAJC17Q9NVM6 304 aaKnown RBP11.45□□□□□ -0.58
CPNE4-209ENST00000512055 LMO7Q8WWI1 1683 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 DCTN3O75935 186 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 FAM47CQ5HY64 1035 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 FBXW10Q5XX13 1052 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 ANKS1AQ92625 1134 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 OTUD5Q96G74 571 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 MYOZ2Q9NPC6 264 aa11.45□□□□□ -0.58
CPNE4-209ENST00000512055 GEMIN8Q9NWZ8 242 aaKnown RBP11.45□□□□□ -0.58
CPNE4-209ENST00000512055 POLR2BP30876 1174 aaKnown RBP11.44□□□□□ -0.58
CPNE4-209ENST00000512055 SOX5P35711 763 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 GGCXP38435 758 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 HADHQ16836 314 aaKnown RBP11.44□□□□□ -0.58
CPNE4-209ENST00000512055 GJB7Q6PEY0 223 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 RHOT2Q8IXI1 618 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 PITPNM3Q9BZ71 974 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 GOLPH3Q9H4A6 298 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 KCNH7Q9NS40 1196 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 ERFP50548 548 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 DYNLT1P63172 113 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 EDRF1Q3B7T1 1238 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 LRRC8BQ6P9F7 803 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 LVRNQ6Q4G3 990 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 CCDC80Q76M96 950 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 SRLQ86TD4 932 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 CERS5Q8N5B7 392 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 KIAA0895Q8NCT3 520 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 FAM163AQ96GL9 167 aaPredicted RBP11.44□□□□□ -0.58
CPNE4-209ENST00000512055 ANKRD36BP1Q96IX9 119 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 ACAD9Q9H845 621 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 L2HGDHQ9H9P8 463 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 CNOT8Q9UFF9 292 aaKnown RBP11.44□□□□□ -0.58
CPNE4-209ENST00000512055 ANAPC7Q9UJX3 599 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 IQANK1A0A1B0GTG1 560 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 RGL2O15211 777 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 SSTR3P32745 418 aaPredicted RBP11.44□□□□□ -0.58
CPNE4-209ENST00000512055 NPEPPSP55786 919 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 CCDC142Q17RM4 750 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 EMBQ6PCB8 327 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms