RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 RPGRIP1Q96KN7 1286 aa18.02■□□□□ 0.48
DDX41-213ENST00000512027 FBXL18Q96ME1 805 aa18.02■□□□□ 0.48
DDX41-213ENST00000512027 FGFBP2Q9BYJ0 223 aa18.02■□□□□ 0.48
DDX41-213ENST00000512027 ZDHHC9Q9Y397 364 aa18.02■□□□□ 0.48
DDX41-213ENST00000512027 MTCL1Q9Y4B5 1905 aaKnown RBP18.02■□□□□ 0.47
DDX41-213ENST00000512027 CUTAO60888 179 aa18.01■□□□□ 0.47
DDX41-213ENST00000512027 PIGRP01833 764 aa18.01■□□□□ 0.47
DDX41-213ENST00000512027 IDEP14735 1019 aa18.01■□□□□ 0.47
DDX41-213ENST00000512027 HOXB8P17481 243 aaPredicted RBP18.01■□□□□ 0.47
DDX41-213ENST00000512027 BRCC3P46736 316 aa18.01■□□□□ 0.47
DDX41-213ENST00000512027 GTF2BQ00403 316 aa18.01■□□□□ 0.47
DDX41-213ENST00000512027 E2F4Q16254 413 aa18.01■□□□□ 0.47
DDX41-213ENST00000512027 TPRNQ4KMQ1 711 aa18.01■□□□□ 0.47
DDX41-213ENST00000512027 AXDND1Q5T1B0 1012 aaPredicted RBP18.01■□□□□ 0.47
DDX41-213ENST00000512027 PALB2Q86YC2 1186 aa18.01■□□□□ 0.47
DDX41-213ENST00000512027 MAP4K3Q8IVH8 894 aa18.01■□□□□ 0.47
DDX41-213ENST00000512027 DHX58Q96C10 678 aa18.01■□□□□ 0.47
DDX41-213ENST00000512027 PHF7Q9BWX1 381 aaPredicted RBP18.01■□□□□ 0.47
DDX41-213ENST00000512027 POMKQ9H5K3 350 aa18.01■□□□□ 0.47
DDX41-213ENST00000512027 RXFP1Q9HBX9 757 aa18.01■□□□□ 0.47
DDX41-213ENST00000512027 MAN1C1Q9NR34 630 aa18.01■□□□□ 0.47
DDX41-213ENST00000512027 DZANK1Q9NVP4 752 aa18.01■□□□□ 0.47
DDX41-213ENST00000512027 CNTN3Q9P232 1028 aa18.01■□□□□ 0.47
DDX41-213ENST00000512027 TUBGCP4Q9UGJ1 667 aa18.01■□□□□ 0.47
DDX41-213ENST00000512027 TCHHQ07283 1943 aa18■□□□□ 0.47
DDX41-213ENST00000512027 FAM86C2PA6NEL3 165 aa18■□□□□ 0.47
DDX41-213ENST00000512027 SPDYE4A6NLX3 237 aa18■□□□□ 0.47
DDX41-213ENST00000512027 FAM189A1O60320 539 aa18■□□□□ 0.47
DDX41-213ENST00000512027 B3GAT3O94766 335 aa18■□□□□ 0.47
DDX41-213ENST00000512027 ADH1AP07327 375 aa18■□□□□ 0.47
DDX41-213ENST00000512027 KCNE1P15382 129 aa18■□□□□ 0.47
DDX41-213ENST00000512027 CASP5P51878 434 aa18■□□□□ 0.47
DDX41-213ENST00000512027 KCNA1Q09470 495 aa18■□□□□ 0.47
DDX41-213ENST00000512027 UPP1Q16831 310 aa18■□□□□ 0.47
DDX41-213ENST00000512027 PPFIBP1Q86W92 1011 aa18■□□□□ 0.47
DDX41-213ENST00000512027 KCNN1Q92952 543 aa18■□□□□ 0.47
DDX41-213ENST00000512027 POP1Q99575 1024 aaKnown RBP18■□□□□ 0.47
DDX41-213ENST00000512027 ADAM7Q9H2U9 754 aa18■□□□□ 0.47
DDX41-213ENST00000512027 PCDHA7Q9UN72 937 aa18■□□□□ 0.47
DDX41-213ENST00000512027 SSX2IPQ9Y2D8 614 aa18■□□□□ 0.47
DDX41-213ENST00000512027 LOC730098B7Z3J9 87 aa17.99■□□□□ 0.47
DDX41-213ENST00000512027 PODXLO00592 558 aa17.99■□□□□ 0.47
DDX41-213ENST00000512027 ADAM12O43184 909 aa17.99■□□□□ 0.47
DDX41-213ENST00000512027 PPP1R37O75864 691 aa17.99■□□□□ 0.47
DDX41-213ENST00000512027 GLUD1P00367 558 aa17.99■□□□□ 0.47
DDX41-213ENST00000512027 TKTP29401 623 aaKnown RBP17.99■□□□□ 0.47
DDX41-213ENST00000512027 ME1P48163 572 aa17.99■□□□□ 0.47
DDX41-213ENST00000512027 PSMD5Q16401 504 aa17.99■□□□□ 0.47
DDX41-213ENST00000512027 CES5AQ6NT32 575 aa17.99■□□□□ 0.47
DDX41-213ENST00000512027 ZNF720Q7Z2F6 126 aa17.99■□□□□ 0.47
DDX41-213ENST00000512027 RNF135Q8IUD6 432 aa17.99■□□□□ 0.47
DDX41-213ENST00000512027 LNX1Q8TBB1 728 aaPredicted RBP17.99■□□□□ 0.47
DDX41-213ENST00000512027 TTPALQ9BTX7 342 aa17.99■□□□□ 0.47
DDX41-213ENST00000512027 MSTO1Q9BUK6 570 aa17.99■□□□□ 0.47
DDX41-213ENST00000512027 MRPL44Q9H9J2 332 aaKnown RBP17.99■□□□□ 0.47
DDX41-213ENST00000512027 TSHZ2Q9NRE2 1034 aa17.99■□□□□ 0.47
DDX41-213ENST00000512027 MUTYHQ9UIF7 546 aa17.99■□□□□ 0.47
DDX41-213ENST00000512027 A0A0B4J269 797 aa17.98■□□□□ 0.47
DDX41-213ENST00000512027 LACTBL1A8MY62 500 aa17.98■□□□□ 0.47
DDX41-213ENST00000512027 TMEM189-UBE2V1I3L0A0 370 aa17.98■□□□□ 0.47
DDX41-213ENST00000512027 OGTO15294 1046 aa17.98■□□□□ 0.47
DDX41-213ENST00000512027 TGM5O43548 720 aa17.98■□□□□ 0.47
DDX41-213ENST00000512027 CLTAP09496 248 aa17.98■□□□□ 0.47
DDX41-213ENST00000512027 CASP1P29466 404 aa17.98■□□□□ 0.47
DDX41-213ENST00000512027 GUCY2FP51841 1108 aa17.98■□□□□ 0.47
DDX41-213ENST00000512027 ITIH3Q06033 890 aa17.98■□□□□ 0.47
DDX41-213ENST00000512027 ENOX2Q16206 610 aaKnown RBP17.98■□□□□ 0.47
DDX41-213ENST00000512027 HERC4Q5GLZ8 1057 aaPredicted RBP17.98■□□□□ 0.47
DDX41-213ENST00000512027 DCLRE1AQ6PJP8 1040 aa17.98■□□□□ 0.47
DDX41-213ENST00000512027 GLIS3Q8NEA6 775 aa17.98■□□□□ 0.47
DDX41-213ENST00000512027 KCNG4Q8TDN1 519 aa17.98■□□□□ 0.47
DDX41-213ENST00000512027 PIK3R5Q8WYR1 880 aa17.98■□□□□ 0.47
DDX41-213ENST00000512027 HPS3Q969F9 1004 aa17.98■□□□□ 0.47
DDX41-213ENST00000512027 UROC1Q96N76 676 aa17.98■□□□□ 0.47
DDX41-213ENST00000512027 CLSTN3Q9BQT9 956 aa17.98■□□□□ 0.47
DDX41-213ENST00000512027 ST6GALNAC4Q9H4F1 302 aa17.98■□□□□ 0.47
DDX41-213ENST00000512027 SFXN1Q9H9B4 322 aa17.98■□□□□ 0.47
DDX41-213ENST00000512027 C11orf16Q9NQ32 467 aa17.98■□□□□ 0.47
DDX41-213ENST00000512027 SLC38A7Q9NVC3 462 aa17.98■□□□□ 0.47
DDX41-213ENST00000512027 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.97■□□□□ 0.47
DDX41-213ENST00000512027 TTC26A0AVF1 554 aa17.97■□□□□ 0.47
DDX41-213ENST00000512027 FRMD3A2A2Y4 597 aa17.97■□□□□ 0.47
DDX41-213ENST00000512027 PI4K2BG5E9Z4 385 aa17.97■□□□□ 0.47
DDX41-213ENST00000512027 RFPL2O75678 378 aa17.97■□□□□ 0.47
DDX41-213ENST00000512027 GCNT3O95395 438 aa17.97■□□□□ 0.47
DDX41-213ENST00000512027 PDIA4P13667 645 aaKnown RBP17.97■□□□□ 0.47
DDX41-213ENST00000512027 GAP43P17677 238 aa17.97■□□□□ 0.47
DDX41-213ENST00000512027 ACOT2P49753 483 aa17.97■□□□□ 0.47
DDX41-213ENST00000512027 FAM212AQ96EL1 285 aa17.97■□□□□ 0.47
DDX41-213ENST00000512027 KIF12Q96FN5 646 aa17.97■□□□□ 0.47
DDX41-213ENST00000512027 STRA6Q9BX79 667 aa17.97■□□□□ 0.47
DDX41-213ENST00000512027 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.97■□□□□ 0.47
DDX41-213ENST00000512027 PANK4Q9NVE7 773 aa17.97■□□□□ 0.47
DDX41-213ENST00000512027 FNIP2Q9P278 1114 aa17.97■□□□□ 0.47
DDX41-213ENST00000512027 POLR2DO15514 142 aaKnown RBP17.96■□□□□ 0.47
DDX41-213ENST00000512027 FGFR3P22607 806 aa17.96■□□□□ 0.47
DDX41-213ENST00000512027 PPP2R3AQ06190 1150 aa17.96■□□□□ 0.47
DDX41-213ENST00000512027 ELAVL2Q12926 359 aaKnown RBP17.96■□□□□ 0.47
DDX41-213ENST00000512027 RSPO2Q6UXX9 243 aaPredicted RBP17.96■□□□□ 0.47
DDX41-213ENST00000512027 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms