RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 NFIAQ12857 509 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 ZNF460Q14592 562 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 GRIN2CQ14957 1233 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 CCDC85BQ15834 202 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 C15orf59Q2T9L4 293 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 SKOR2Q2VWA4 1001 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 SEZ6Q53EL9 994 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 DCAF17Q5H9S7 520 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 TTC19Q6DKK2 380 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 CIAPIN1Q6FI81 312 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 TAOK1Q7L7X3 1001 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 ZNF804AQ7Z570 1209 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 AACSQ86V21 672 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 ZBTB34Q8NCN2 500 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 SLC35G2Q8TBE7 412 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 ACMSDQ8TDX5 336 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 OTUD7AQ8TE49 926 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 TEKT4Q8WW24 435 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 LPIN2Q92539 896 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 EDEM1Q92611 657 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 NKD1Q969G9 470 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 FAM84BQ96KN1 310 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 DBNDD2Q9BQY9 259 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 UQCC2Q9BRT2 126 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 PLVAPQ9BX97 442 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 NSRP1Q9H0G5 558 aaKnown RBP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 GHITMQ9H3K2 345 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 MROH8Q9H579 483 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 CD209Q9NNX6 404 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 GRHPRQ9UBQ7 328 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 ADGRE2Q9UHX3 823 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 HOOK1Q9UJC3 728 aaKnown RBP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 GRID1Q9ULK0 1009 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 EXOC7Q9UPT5 735 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 GLTPD2A6NH11 291 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 LRRC14BA6NHZ5 514 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 FZD9O00144 591 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 MEN1O00255 615 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 IKBKBO14920 756 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 PAPLNO95428 1278 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 LARGE1O95461 756 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 MYCP01106 439 aaPredicted RBP5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 TPM1P09493 284 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 POTEJP0CG39 1038 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 PDHBP11177 359 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 TPP2P29144 1249 aaPredicted RBP5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 NR2C2P49116 596 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 ETV1P50549 477 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 USP11P51784 963 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 NR1H2P55055 460 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 SLC26A5P58743 744 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 C17orf67Q0P5P2 114 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 CUL2Q13617 745 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 IQCB1Q15051 598 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 ARL13BQ3SXY8 428 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 CEP55Q53EZ4 464 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 B3GNT9Q6UX72 402 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 SYTL1Q8IYJ3 562 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 GOLM1Q8NBJ4 401 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 TTC13Q8NBP0 860 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 RHPN1Q8TCX5 695 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 KRT35Q92764 455 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 KCNN1Q92952 543 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 EAF2Q96CJ1 260 aaPredicted RBP5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 XAGE2Q96GT9 111 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 FOXP3Q9BZS1 431 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 ZCWPW1Q9H0M4 648 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 VTA1Q9NP79 307 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 SIRT5Q9NXA8 310 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 AATFQ9NY61 560 aaKnown RBP eCLIP5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 ADD3Q9UEY8 706 aaKnown RBP5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 RASAL2Q9UJF2 1139 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 PCDHGB4Q9UN71 923 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 PCDHGA10Q9Y5H3 936 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 FPGT-TNNI3KV9GXZ4 949 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 TIAM2Q8IVF5 1701 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 MED23Q9ULK4 1368 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 FLT1P17948 1338 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 M0R2C6 588 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 PLD2O14939 933 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 TSPAN3O60637 253 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 SMPD2O60906 423 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 ENDOD1O94919 500 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 SBF1O95248 1867 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 EGFRP00533 1210 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 SERPINC1P01008 464 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 ADRB2P07550 413 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 ARAFP10398 606 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 IFNAR2P48551 515 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 AFF3P51826 1226 aaKnown RBP5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 MAPK10P53779 464 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 HTRA3P83110 453 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 BLMHQ13867 455 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 SUZ12Q15022 739 aaKnown RBP5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 DHCR24Q15392 516 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 SURF1Q15526 300 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 KIAA0753Q2KHM9 967 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 TBC1D25Q3MII6 688 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 PKDCCQ504Y2 493 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 SMUG1Q53HV7 270 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms