RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 TPH2Q8IWU9 490 aa21.07■□□□□ 0.96
HMGCS1-206ENST00000511774 ELSPBP1Q96BH3 223 aa21.07■□□□□ 0.96
HMGCS1-206ENST00000511774 LARP6Q9BRS8 491 aaKnown RBP21.07■□□□□ 0.96
HMGCS1-206ENST00000511774 SEMA4GQ9NTN9 838 aa21.07■□□□□ 0.96
HMGCS1-206ENST00000511774 GDE1Q9NZC3 331 aa21.07■□□□□ 0.96
HMGCS1-206ENST00000511774 CDY1Q9Y6F8 540 aa21.07■□□□□ 0.96
HMGCS1-206ENST00000511774 LAMA1P25391 3075 aa21.06■□□□□ 0.96
HMGCS1-206ENST00000511774 FAM205CA6NFA0 338 aa21.06■□□□□ 0.96
HMGCS1-206ENST00000511774 RECQL4O94761 1208 aa21.06■□□□□ 0.96
HMGCS1-206ENST00000511774 RETP07949 1114 aa21.06■□□□□ 0.96
HMGCS1-206ENST00000511774 CCR2P41597 374 aa21.06■□□□□ 0.96
HMGCS1-206ENST00000511774 FAM78AQ5JUQ0 283 aa21.06■□□□□ 0.96
HMGCS1-206ENST00000511774 PRSS36Q5K4E3 855 aa21.06■□□□□ 0.96
HMGCS1-206ENST00000511774 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.06■□□□□ 0.96
HMGCS1-206ENST00000511774 PRR23CQ6ZRP0 262 aa21.06■□□□□ 0.96
HMGCS1-206ENST00000511774 CELF5Q8N6W0 485 aaKnown RBP21.06■□□□□ 0.96
HMGCS1-206ENST00000511774 OXER1Q8TDS5 423 aa21.06■□□□□ 0.96
HMGCS1-206ENST00000511774 DNASE1L2Q92874 299 aa21.06■□□□□ 0.96
HMGCS1-206ENST00000511774 CHAMP1Q96JM3 812 aa21.06■□□□□ 0.96
HMGCS1-206ENST00000511774 POLR3FQ9H1D9 316 aaPredicted RBP21.06■□□□□ 0.96
HMGCS1-206ENST00000511774 PDZD7Q9H5P4 517 aa21.06■□□□□ 0.96
HMGCS1-206ENST00000511774 GPRC5CQ9NQ84 441 aa21.06■□□□□ 0.96
HMGCS1-206ENST00000511774 GJB4Q9NTQ9 266 aa21.06■□□□□ 0.96
HMGCS1-206ENST00000511774 MRPS17Q9Y2R5 130 aaKnown RBP21.06■□□□□ 0.96
HMGCS1-206ENST00000511774 PDCD11Q14690 1871 aaKnown RBP21.06■□□□□ 0.96
HMGCS1-206ENST00000511774 ASPMQ8IZT6 3477 aa21.05■□□□□ 0.96
HMGCS1-206ENST00000511774 SPEGQ15772 3267 aa21.05■□□□□ 0.96
HMGCS1-206ENST00000511774 I3L4J1 428 aa21.05■□□□□ 0.96
HMGCS1-206ENST00000511774 DEXIO95424 95 aa21.05■□□□□ 0.96
HMGCS1-206ENST00000511774 THP07101 528 aa21.05■□□□□ 0.96
HMGCS1-206ENST00000511774 TKTP29401 623 aaKnown RBP21.05■□□□□ 0.96
HMGCS1-206ENST00000511774 HSPA4P34932 840 aa21.05■□□□□ 0.96
HMGCS1-206ENST00000511774 WDR44Q5JSH3 913 aa21.05■□□□□ 0.96
HMGCS1-206ENST00000511774 NEK8Q86SG6 692 aa21.05■□□□□ 0.96
HMGCS1-206ENST00000511774 MAP4K3Q8IVH8 894 aa21.05■□□□□ 0.96
HMGCS1-206ENST00000511774 TRIM22Q8IYM9 498 aa21.05■□□□□ 0.96
HMGCS1-206ENST00000511774 DDX27Q96GQ7 796 aaKnown RBP21.05■□□□□ 0.96
HMGCS1-206ENST00000511774 EIF2AK1Q9BQI3 630 aaKnown RBP21.05■□□□□ 0.96
HMGCS1-206ENST00000511774 LMAN1LQ9HAT1 526 aa21.05■□□□□ 0.96
HMGCS1-206ENST00000511774 AVENQ9NQS1 362 aaPredicted RBP21.05■□□□□ 0.96
HMGCS1-206ENST00000511774 C2orf42Q9NWW7 574 aa21.05■□□□□ 0.96
HMGCS1-206ENST00000511774 RAB23Q9ULC3 237 aa21.05■□□□□ 0.96
HMGCS1-206ENST00000511774 IGF2RP11717 2491 aa21.05■□□□□ 0.96
HMGCS1-206ENST00000511774 TBX3O15119 743 aa21.04■□□□□ 0.96
HMGCS1-206ENST00000511774 CCNT1O60563 726 aaKnown RBP21.04■□□□□ 0.96
HMGCS1-206ENST00000511774 PPP4R3CPQ6ZMV5 832 aa21.04■□□□□ 0.96
HMGCS1-206ENST00000511774 NOSTRINQ8IVI9 506 aa21.04■□□□□ 0.96
HMGCS1-206ENST00000511774 C3orf58Q8NDZ4 430 aa21.04■□□□□ 0.96
HMGCS1-206ENST00000511774 ZSWIM3Q96MP5 696 aa21.04■□□□□ 0.96
HMGCS1-206ENST00000511774 HSD17B14Q9BPX1 270 aa21.04■□□□□ 0.96
HMGCS1-206ENST00000511774 BRD9Q9H8M2 597 aa21.04■□□□□ 0.96
HMGCS1-206ENST00000511774 SPAG17Q6Q759 2223 aa21.04■□□□□ 0.96
HMGCS1-206ENST00000511774 GREB1Q4ZG55 1949 aa21.04■□□□□ 0.96
HMGCS1-206ENST00000511774 CHURC1-FNTBB4DL54 471 aa21.03■□□□□ 0.96
HMGCS1-206ENST00000511774 LRP3O75074 770 aa21.03■□□□□ 0.96
HMGCS1-206ENST00000511774 DGAT1O75907 488 aa21.03■□□□□ 0.96
HMGCS1-206ENST00000511774 LYPLA2O95372 231 aa21.03■□□□□ 0.96
HMGCS1-206ENST00000511774 CHRNB1P11230 501 aa21.03■□□□□ 0.96
HMGCS1-206ENST00000511774 FNTBP49356 437 aa21.03■□□□□ 0.96
HMGCS1-206ENST00000511774 RARRES1P49788 294 aa21.03■□□□□ 0.96
HMGCS1-206ENST00000511774 NRLP54845 237 aa21.03■□□□□ 0.96
HMGCS1-206ENST00000511774 ELAVL2Q12926 359 aaKnown RBP21.03■□□□□ 0.96
HMGCS1-206ENST00000511774 CSRP2Q16527 193 aa21.03■□□□□ 0.96
HMGCS1-206ENST00000511774 EEF1DP3Q658K8 133 aa21.03■□□□□ 0.96
HMGCS1-206ENST00000511774 GALNT17Q6IS24 598 aa21.03■□□□□ 0.96
HMGCS1-206ENST00000511774 VITQ6UXI7 678 aa21.03■□□□□ 0.96
HMGCS1-206ENST00000511774 PIGOQ8TEQ8 1089 aa21.03■□□□□ 0.96
HMGCS1-206ENST00000511774 FZD8Q9H461 694 aa21.03■□□□□ 0.96
HMGCS1-206ENST00000511774 GOLGA2P5Q9HBQ8 144 aa21.03■□□□□ 0.96
HMGCS1-206ENST00000511774 ZNF334Q9HCZ1 680 aaPredicted RBP21.03■□□□□ 0.96
HMGCS1-206ENST00000511774 ARHGEF37A1IGU5 675 aa21.02■□□□□ 0.96
HMGCS1-206ENST00000511774 LRRIQ4A6NIV6 560 aa21.02■□□□□ 0.96
HMGCS1-206ENST00000511774 MAN2B1O00754 1011 aa21.02■□□□□ 0.96
HMGCS1-206ENST00000511774 MOSPD3O75425 235 aa21.02■□□□□ 0.96
HMGCS1-206ENST00000511774 GCFC2P16383 781 aaKnown RBP21.02■□□□□ 0.96
HMGCS1-206ENST00000511774 KCNA4P22459 653 aa21.02■□□□□ 0.96
HMGCS1-206ENST00000511774 BRCC3P46736 316 aa21.02■□□□□ 0.96
HMGCS1-206ENST00000511774 SIM2Q14190 667 aaPredicted RBP21.02■□□□□ 0.96
HMGCS1-206ENST00000511774 GLRA4Q5JXX5 417 aa21.02■□□□□ 0.96
HMGCS1-206ENST00000511774 CDCA2Q69YH5 1023 aaPredicted RBP21.02■□□□□ 0.96
HMGCS1-206ENST00000511774 PDXDC1Q6P996 788 aa21.02■□□□□ 0.96
HMGCS1-206ENST00000511774 PIK3AP1Q6ZUJ8 805 aa21.02■□□□□ 0.96
HMGCS1-206ENST00000511774 MAEAQ7L5Y9 396 aa21.02■□□□□ 0.96
HMGCS1-206ENST00000511774 BSNDQ8WZ55 320 aa21.02■□□□□ 0.96
HMGCS1-206ENST00000511774 FAM3CQ92520 227 aa21.02■□□□□ 0.96
HMGCS1-206ENST00000511774 ASB16Q96NS5 453 aa21.02■□□□□ 0.96
HMGCS1-206ENST00000511774 CORO1BQ9BR76 489 aa21.02■□□□□ 0.96
HMGCS1-206ENST00000511774 ANKEF1Q9NU02 776 aa21.02■□□□□ 0.96
HMGCS1-206ENST00000511774 BACE2Q9Y5Z0 518 aa21.02■□□□□ 0.96
HMGCS1-206ENST00000511774 PIAS3Q9Y6X2 628 aa21.02■□□□□ 0.96
HMGCS1-206ENST00000511774 CCDC194A0A1B0GVG4 234 aa21.01■□□□□ 0.95
HMGCS1-206ENST00000511774 WDR27A2RRH5 827 aa21.01■□□□□ 0.95
HMGCS1-206ENST00000511774 TMEM189-UBE2V1I3L0A0 370 aa21.01■□□□□ 0.95
HMGCS1-206ENST00000511774 K7ESF4 209 aa21.01■□□□□ 0.95
HMGCS1-206ENST00000511774 USO1O60763 962 aaKnown RBP21.01■□□□□ 0.95
HMGCS1-206ENST00000511774 SEC24AO95486 1093 aa21.01■□□□□ 0.95
HMGCS1-206ENST00000511774 PTPN2P17706 415 aa21.01■□□□□ 0.95
HMGCS1-206ENST00000511774 PMLP29590 882 aa21.01■□□□□ 0.95
HMGCS1-206ENST00000511774 VIPR2P41587 438 aa21.01■□□□□ 0.95
HMGCS1-206ENST00000511774 CCR3P51677 355 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms