RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 SPEF1Q9Y4P9 236 aa4.2□□□□□ -1.74
CHD1-207ENST00000511628 TRIM75PA6NK02 468 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 FAM171A2A8MVW0 826 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 GRXCR1A8MXD5 290 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 AHRRA9YTQ3 701 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 PJA2O43164 708 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 TEX33O43247 280 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 B3GALT2O43825 422 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 ZRANB2O95218 330 aaKnown RBP eCLIP4.19□□□□□ -1.74
CHD1-207ENST00000511628 POMCP01189 267 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 ZSCAN20P17040 1043 aaPredicted RBP4.19□□□□□ -1.74
CHD1-207ENST00000511628 ATP5JP18859 108 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 CHN2P52757 468 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 PURAQ00577 322 aaKnown RBP4.19□□□□□ -1.74
CHD1-207ENST00000511628 GUCY1B3Q02153 619 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 CREMQ03060 361 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 ACAP2Q15057 778 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 SMN1Q16637 294 aaKnown RBP4.19□□□□□ -1.74
CHD1-207ENST00000511628 MED25Q71SY5 747 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 GPRIN1Q7Z2K8 1008 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 LDLRAD3Q86YD5 345 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 VRK3Q8IV63 474 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 TPH2Q8IWU9 490 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 DRC7Q8IY82 874 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 CHPFQ8IZ52 775 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 TRMT2AQ8IZ69 625 aaKnown RBP4.19□□□□□ -1.74
CHD1-207ENST00000511628 PPM1NQ8N819 430 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 JPH3Q8WXH2 748 aaPredicted RBP4.19□□□□□ -1.74
CHD1-207ENST00000511628 MYEOVQ96EZ4 313 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 MRI1Q9BV20 369 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 MLST8Q9BVC4 326 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 MANSC1Q9H8J5 431 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 MKS1Q9NXB0 559 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 ZNF180Q9UJW8 692 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 NOX1Q9Y5S8 564 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 GPR45Q9Y5Y3 372 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 FPGT-TNNI3KV9GXZ4 949 aa4.19□□□□□ -1.74
CHD1-207ENST00000511628 CXorf49A8MYA2 514 aaPredicted RBP4.18□□□□□ -1.74
CHD1-207ENST00000511628 FOXN1O15353 648 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 GCP02774 474 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 DDX6P26196 483 aaKnown RBP eCLIP4.18□□□□□ -1.74
CHD1-207ENST00000511628 AVPR1BP47901 424 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 FAM189BP81408 668 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 SP140Q13342 867 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 PDCD4Q53EL6 469 aaKnown RBP4.18□□□□□ -1.74
CHD1-207ENST00000511628 HSP90AB2PQ58FF8 381 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 TSHZ3Q63HK5 1081 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 AFMIDQ63HM1 303 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 FOXR2Q6PJQ5 311 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 ZNF572Q7Z3I7 529 aaPredicted RBP4.18□□□□□ -1.74
CHD1-207ENST00000511628 KCNK18Q7Z418 384 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 RSPH3Q86UC2 560 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 CMTR2Q8IYT2 770 aaKnown RBP4.18□□□□□ -1.74
CHD1-207ENST00000511628 CPA6Q8N4T0 437 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 LILRA3Q8N6C8 439 aaPredicted RBP4.18□□□□□ -1.74
CHD1-207ENST00000511628 CPEB3Q8NE35 698 aaKnown RBP4.18□□□□□ -1.74
CHD1-207ENST00000511628 SLC35B2Q8TB61 432 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 CCHCR1Q8TD31 782 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 JADE3Q92613 823 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 TEKT5Q96M29 485 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 SLC2A13Q96QE2 648 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 C7orf25Q9BPX7 421 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 WDR11Q9BZH6 1224 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 SLC52A1Q9NWF4 448 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 GABBR1Q9UBS5 961 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 TESQ9UGI8 421 aaKnown RBP4.18□□□□□ -1.74
CHD1-207ENST00000511628 AJAP1Q9UKB5 411 aaPredicted RBP4.18□□□□□ -1.74
CHD1-207ENST00000511628 RUVBL1Q9Y265 456 aaKnown RBP4.18□□□□□ -1.74
CHD1-207ENST00000511628 DMRT1Q9Y5R6 373 aa4.18□□□□□ -1.74
CHD1-207ENST00000511628 UNC119BA6NIH7 251 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 DRGXA6NNA5 263 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 ZNF185O15231 689 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 XPOTO43592 962 aaKnown RBP4.17□□□□□ -1.74
CHD1-207ENST00000511628 LPXNO60711 386 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 ERN1O75460 977 aaKnown RBP4.17□□□□□ -1.74
CHD1-207ENST00000511628 SNUPNO95149 360 aaKnown RBP4.17□□□□□ -1.74
CHD1-207ENST00000511628 PF4V1P10720 104 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 ALAS1P13196 640 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 NR4A1P22736 598 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 MCAMP43121 646 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 MTNR1BP49286 362 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 SLC16A1P53985 500 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 KRT85P78386 507 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 RESTQ13127 1097 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 TMEM240Q5SV17 173 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 ZNF529Q6P280 563 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 Q6ZVL8 140 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 PNMA8AQ86V59 439 aaPredicted RBP4.17□□□□□ -1.74
CHD1-207ENST00000511628 DNAJC10Q8IXB1 793 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 RHOT1Q8IXI2 618 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 MYO1HQ8N1T3 1032 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 RNF31Q96EP0 1072 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 CYFIP2Q96F07 1278 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 C8orf48Q96LL4 319 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 CRAMP1Q96RY5 1269 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 SERHL2Q9H4I8 314 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 ZNHIT2Q9UHR6 403 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 INTUQ9ULD6 942 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 MAP3K2Q9Y2U5 619 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 MTO1Q9Y2Z2 717 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms