RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 TRPV2Q9Y5S1 764 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 MROH7Q68CQ1 1323 aa16.39■□□□□ 0.21
SCLT1-209ENST00000511426 PHACTR2O75167 634 aa16.39■□□□□ 0.21
SCLT1-209ENST00000511426 MRPS6P82932 125 aaKnown RBP16.39■□□□□ 0.21
SCLT1-209ENST00000511426 PTK2Q05397 1052 aa16.39■□□□□ 0.21
SCLT1-209ENST00000511426 NCOA4Q13772 614 aa16.39■□□□□ 0.21
SCLT1-209ENST00000511426 GJB7Q6PEY0 223 aa16.39■□□□□ 0.21
SCLT1-209ENST00000511426 ARHGEF19Q8IW93 802 aa16.39■□□□□ 0.21
SCLT1-209ENST00000511426 ARRDC4Q8NCT1 418 aa16.39■□□□□ 0.21
SCLT1-209ENST00000511426 ACAP3Q96P50 834 aa16.39■□□□□ 0.21
SCLT1-209ENST00000511426 AJAP1Q9UKB5 411 aaPredicted RBP16.39■□□□□ 0.21
SCLT1-209ENST00000511426 INTUQ9ULD6 942 aa16.39■□□□□ 0.21
SCLT1-209ENST00000511426 PCDHA13Q9Y5I0 950 aa16.39■□□□□ 0.21
SCLT1-209ENST00000511426 PLEKP08567 350 aaPredicted RBP16.38■□□□□ 0.21
SCLT1-209ENST00000511426 HOXA11P31270 313 aaPredicted RBP16.38■□□□□ 0.21
SCLT1-209ENST00000511426 BPIFB4P59827 614 aa16.38■□□□□ 0.21
SCLT1-209ENST00000511426 SGSM1Q2NKQ1 1148 aa16.38■□□□□ 0.21
SCLT1-209ENST00000511426 TRAPPC11Q7Z392 1133 aa16.38■□□□□ 0.21
SCLT1-209ENST00000511426 GLT1D1Q96MS3 346 aa16.38■□□□□ 0.21
SCLT1-209ENST00000511426 PPP1R16BQ96T49 567 aa16.38■□□□□ 0.21
SCLT1-209ENST00000511426 SQORQ9Y6N5 450 aa16.38■□□□□ 0.21
SCLT1-209ENST00000511426 PTPRJQ12913 1337 aa16.38■□□□□ 0.21
SCLT1-209ENST00000511426 BTNL10A8MVZ5 291 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 VNN1O95497 513 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 ASS1P00966 412 aaKnown RBP16.37■□□□□ 0.21
SCLT1-209ENST00000511426 ATICP31939 592 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 ARHGAP25P42331 645 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 MAGEA1P43355 309 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 ACLYP53396 1101 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 WNT7BP56706 349 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 ARID5AQ03989 594 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 PTK7Q13308 1070 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 ARHGAP44Q17R89 818 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 CCDC122Q5T0U0 273 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 GDF6Q6KF10 455 aaPredicted RBP16.37■□□□□ 0.21
SCLT1-209ENST00000511426 CPB2Q96IY4 423 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 SYT11Q9BT88 431 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 CHST12Q9NRB3 414 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 GINS2Q9Y248 185 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 FOXN3O00409 490 aaPredicted RBP16.37■□□□□ 0.21
SCLT1-209ENST00000511426 ZNF263O14978 683 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 CXCL8P10145 99 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 YARSP54577 528 aaKnown RBP16.37■□□□□ 0.21
SCLT1-209ENST00000511426 NOP14P78316 857 aaKnown RBP16.37■□□□□ 0.21
SCLT1-209ENST00000511426 ZNF200P98182 395 aaPredicted RBP16.37■□□□□ 0.21
SCLT1-209ENST00000511426 TRPC3Q13507 836 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 TUBB2AQ13885 445 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 NAB2Q15742 525 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 FAM47CQ5HY64 1035 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 ZNF571Q7Z3V5 609 aaPredicted RBP16.37■□□□□ 0.21
SCLT1-209ENST00000511426 ZNF677Q86XU0 584 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 RNF10Q8N5U6 811 aaKnown RBP16.37■□□□□ 0.21
SCLT1-209ENST00000511426 USP38Q8NB14 1042 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 OR5B17Q8NGF7 314 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 CALR3Q96L12 384 aaKnown RBP16.37■□□□□ 0.21
SCLT1-209ENST00000511426 KREMEN1Q96MU8 473 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 TUBB2BQ9BVA1 445 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 MTMR12Q9C0I1 747 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 VRTNQ9H8Y1 702 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 LZTFL1Q9NQ48 299 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 ADAMTS1Q9UHI8 967 aa16.37■□□□□ 0.21
SCLT1-209ENST00000511426 A0A087X0T9 212 aa16.36■□□□□ 0.21
SCLT1-209ENST00000511426 CSDE1O75534 798 aaKnown RBP16.36■□□□□ 0.21
SCLT1-209ENST00000511426 STAU1O95793 577 aaKnown RBP16.36■□□□□ 0.21
SCLT1-209ENST00000511426 FAM228BP0C875 321 aa16.36■□□□□ 0.21
SCLT1-209ENST00000511426 GNG11P61952 73 aa16.36■□□□□ 0.21
SCLT1-209ENST00000511426 YWHAEP62258 255 aaKnown RBP16.36■□□□□ 0.21
SCLT1-209ENST00000511426 GFPT1Q06210 699 aaPredicted RBP16.36■□□□□ 0.21
SCLT1-209ENST00000511426 TMEM62Q0P6H9 643 aa16.36■□□□□ 0.21
SCLT1-209ENST00000511426 CUL2Q13617 745 aa16.36■□□□□ 0.21
SCLT1-209ENST00000511426 ITGA7Q13683 1181 aa16.36■□□□□ 0.21
SCLT1-209ENST00000511426 SEZ6Q53EL9 994 aa16.36■□□□□ 0.21
SCLT1-209ENST00000511426 LHX8Q68G74 356 aa16.36■□□□□ 0.21
SCLT1-209ENST00000511426 CEP120Q8N960 986 aa16.36■□□□□ 0.21
SCLT1-209ENST00000511426 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.36■□□□□ 0.21
SCLT1-209ENST00000511426 TRIM6Q9C030 488 aaPredicted RBP16.36■□□□□ 0.21
SCLT1-209ENST00000511426 NAGPAQ9UK23 515 aa16.36■□□□□ 0.21
SCLT1-209ENST00000511426 ITGA11Q9UKX5 1188 aa16.36■□□□□ 0.21
SCLT1-209ENST00000511426 NENFQ9UMX5 172 aa16.36■□□□□ 0.21
SCLT1-209ENST00000511426 CNTN6Q9UQ52 1028 aa16.36■□□□□ 0.21
SCLT1-209ENST00000511426 TRIM17Q9Y577 477 aa16.36■□□□□ 0.21
SCLT1-209ENST00000511426 LRRN2O75325 713 aa16.35■□□□□ 0.21
SCLT1-209ENST00000511426 TFAMQ00059 246 aaKnown RBP16.35■□□□□ 0.21
SCLT1-209ENST00000511426 PTGISQ16647 500 aa16.35■□□□□ 0.21
SCLT1-209ENST00000511426 SLC10A6Q3KNW5 377 aa16.35■□□□□ 0.21
SCLT1-209ENST00000511426 LMBRD2Q68DH5 695 aaPredicted RBP16.35■□□□□ 0.21
SCLT1-209ENST00000511426 PPP1R2P3Q6NXS1 205 aa16.35■□□□□ 0.21
SCLT1-209ENST00000511426 ALKBH5Q6P6C2 394 aaKnown RBP16.35■□□□□ 0.21
SCLT1-209ENST00000511426 SYT10Q6XYQ8 523 aa16.35■□□□□ 0.21
SCLT1-209ENST00000511426 EFCAB13Q8IY85 973 aa16.35■□□□□ 0.21
SCLT1-209ENST00000511426 HACE1Q8IYU2 909 aa16.35■□□□□ 0.21
SCLT1-209ENST00000511426 TTC39CQ8N584 583 aa16.35■□□□□ 0.21
SCLT1-209ENST00000511426 TRIM58Q8NG06 486 aa16.35■□□□□ 0.21
SCLT1-209ENST00000511426 SLC30A5Q8TAD4 765 aa16.35■□□□□ 0.21
SCLT1-209ENST00000511426 FAM212AQ96EL1 285 aa16.35■□□□□ 0.21
SCLT1-209ENST00000511426 SENP6Q9GZR1 1112 aaPredicted RBP16.35■□□□□ 0.21
SCLT1-209ENST00000511426 CDHR5Q9HBB8 845 aa16.35■□□□□ 0.21
SCLT1-209ENST00000511426 PIN4Q9Y237 131 aaKnown RBP16.35■□□□□ 0.21
SCLT1-209ENST00000511426 CDY2AQ9Y6F7 541 aa16.35■□□□□ 0.21
SCLT1-209ENST00000511426 GPR182O15218 404 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms