RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 PTPN23Q9H3S7 1636 aa9.2□□□□□ -0.94
USP53-206ENST00000510737 TIGD2Q4W5G0 525 aa9.19□□□□□ -0.94
USP53-206ENST00000510737 DOK3Q7L591 496 aa9.19□□□□□ -0.94
USP53-206ENST00000510737 TEX101Q9BY14 249 aa9.19□□□□□ -0.94
USP53-206ENST00000510737 CHST2Q9Y4C5 530 aa9.19□□□□□ -0.94
USP53-206ENST00000510737 PPP2R3BQ9Y5P8 575 aa9.19□□□□□ -0.94
USP53-206ENST00000510737 TNFRSF18Q9Y5U5 241 aa9.19□□□□□ -0.94
USP53-206ENST00000510737 NPHP3Q7Z494 1330 aa9.19□□□□□ -0.94
USP53-206ENST00000510737 NRXN3Q9Y4C0 1643 aa9.19□□□□□ -0.94
USP53-206ENST00000510737 RECQL4O94761 1208 aa9.18□□□□□ -0.94
USP53-206ENST00000510737 GZMKP49863 264 aa9.18□□□□□ -0.94
USP53-206ENST00000510737 GPR158Q5T848 1215 aa9.18□□□□□ -0.94
USP53-206ENST00000510737 CNNM4Q6P4Q7 775 aa9.18□□□□□ -0.94
USP53-206ENST00000510737 BTNL9Q6UXG8 535 aa9.18□□□□□ -0.94
USP53-206ENST00000510737 SLC41A1Q8IVJ1 513 aa9.18□□□□□ -0.94
USP53-206ENST00000510737 GLB1L3Q8NCI6 653 aaPredicted RBP9.18□□□□□ -0.94
USP53-206ENST00000510737 NTN5Q8WTR8 489 aaPredicted RBP9.18□□□□□ -0.94
USP53-206ENST00000510737 PXDNQ92626 1479 aa9.18□□□□□ -0.94
USP53-206ENST00000510737 RREB1Q92766 1687 aa9.18□□□□□ -0.94
USP53-206ENST00000510737 GPR101Q96P66 508 aaPredicted RBP9.18□□□□□ -0.94
USP53-206ENST00000510737 SLC46A2Q9BY10 475 aa9.18□□□□□ -0.94
USP53-206ENST00000510737 RPRD2Q5VT52 1461 aaKnown RBP9.17□□□□□ -0.94
USP53-206ENST00000510737 GYPEP15421 78 aa9.17□□□□□ -0.94
USP53-206ENST00000510737 KPNA1P52294 538 aaPredicted RBP9.17□□□□□ -0.94
USP53-206ENST00000510737 WNT3AP56704 352 aa9.17□□□□□ -0.94
USP53-206ENST00000510737 PHC1P78364 1004 aa9.17□□□□□ -0.94
USP53-206ENST00000510737 MGAT5Q09328 741 aa9.17□□□□□ -0.94
USP53-206ENST00000510737 UBE3CQ15386 1083 aa9.17□□□□□ -0.94
USP53-206ENST00000510737 TCEA2Q15560 299 aa9.17□□□□□ -0.94
USP53-206ENST00000510737 HECTD2Q5U5R9 776 aa9.17□□□□□ -0.94
USP53-206ENST00000510737 PASD1Q8IV76 773 aa9.17□□□□□ -0.94
USP53-206ENST00000510737 SYNPOQ8N3V7 929 aa9.17□□□□□ -0.94
USP53-206ENST00000510737 ZNF610Q8N9Z0 462 aa9.17□□□□□ -0.94
USP53-206ENST00000510737 MYEOVQ96EZ4 313 aa9.17□□□□□ -0.94
USP53-206ENST00000510737 SYNPO2LQ9H987 977 aa9.17□□□□□ -0.94
USP53-206ENST00000510737 ANKFY1Q9P2R3 1169 aa9.17□□□□□ -0.94
USP53-206ENST00000510737 DKK2Q9UBU2 259 aa9.17□□□□□ -0.94
USP53-206ENST00000510737 EVLQ9UI08 416 aaPredicted RBP9.17□□□□□ -0.94
USP53-206ENST00000510737 NUP188Q5SRE5 1749 aa9.17□□□□□ -0.94
USP53-206ENST00000510737 SPATA31A3Q5VYP0 1347 aa9.16□□□□□ -0.94
USP53-206ENST00000510737 ST20-MTHFSA0A0A6YYL1 179 aa9.16□□□□□ -0.94
USP53-206ENST00000510737 LAG3P18627 525 aa9.16□□□□□ -0.94
USP53-206ENST00000510737 DUSP2Q05923 314 aa9.16□□□□□ -0.94
USP53-206ENST00000510737 TRIM25Q14258 630 aaKnown RBP9.16□□□□□ -0.94
USP53-206ENST00000510737 TERF2Q15554 542 aa9.16□□□□□ -0.94
USP53-206ENST00000510737 ANKS6Q68DC2 871 aa9.16□□□□□ -0.94
USP53-206ENST00000510737 NINJ1Q92982 152 aa9.16□□□□□ -0.94
USP53-206ENST00000510737 TRPM5Q9NZQ8 1165 aa9.16□□□□□ -0.94
USP53-206ENST00000510737 USP32Q8NFA0 1604 aa9.16□□□□□ -0.94
USP53-206ENST00000510737 ADGRB2O60241 1585 aa9.16□□□□□ -0.94
USP53-206ENST00000510737 B3GALT2O43825 422 aa9.15□□□□□ -0.94
USP53-206ENST00000510737 NCR1O76036 304 aa9.15□□□□□ -0.94
USP53-206ENST00000510737 RHOBTB3O94955 611 aa9.15□□□□□ -0.94
USP53-206ENST00000510737 NUDT3O95989 172 aa9.15□□□□□ -0.94
USP53-206ENST00000510737 ZEB1P37275 1124 aaPredicted RBP9.15□□□□□ -0.94
USP53-206ENST00000510737 GPR15P49685 360 aa9.15□□□□□ -0.94
USP53-206ENST00000510737 NBPF8Q3BBV2 869 aa9.15□□□□□ -0.94
USP53-206ENST00000510737 Q6YL49 198 aa9.15□□□□□ -0.94
USP53-206ENST00000510737 VOPP1Q96AW1 172 aa9.15□□□□□ -0.94
USP53-206ENST00000510737 FAM193BQ96PV7 902 aaPredicted RBP9.15□□□□□ -0.94
USP53-206ENST00000510737 TARS2Q9BW92 718 aaKnown RBP9.15□□□□□ -0.94
USP53-206ENST00000510737 PRSS50Q9UI38 385 aa9.15□□□□□ -0.94
USP53-206ENST00000510737 NUMBLQ9Y6R0 609 aa9.15□□□□□ -0.94
USP53-206ENST00000510737 PLCH1Q4KWH8 1693 aa9.15□□□□□ -0.94
USP53-206ENST00000510737 TMEM200CA6NKL6 621 aa9.14□□□□□ -0.95
USP53-206ENST00000510737 CLEC2LP0C7M8 214 aa9.14□□□□□ -0.95
USP53-206ENST00000510737 MANFP55145 182 aaKnown RBP9.14□□□□□ -0.95
USP53-206ENST00000510737 PPARAQ07869 468 aa9.14□□□□□ -0.95
USP53-206ENST00000510737 GDF7Q7Z4P5 450 aa9.14□□□□□ -0.95
USP53-206ENST00000510737 DHX37Q8IY37 1157 aaKnown RBP9.14□□□□□ -0.95
USP53-206ENST00000510737 ANO3Q9BYT9 981 aa9.14□□□□□ -0.95
USP53-206ENST00000510737 TOR3AQ9H497 397 aa9.14□□□□□ -0.95
USP53-206ENST00000510737 SERHL2Q9H4I8 314 aa9.14□□□□□ -0.95
USP53-206ENST00000510737 NRKQ7Z2Y5 1582 aa9.13□□□□□ -0.95
USP53-206ENST00000510737 TMEM127O75204 238 aa9.13□□□□□ -0.95
USP53-206ENST00000510737 ZSCAN20P17040 1043 aaPredicted RBP9.13□□□□□ -0.95
USP53-206ENST00000510737 ADCYAP1R1P41586 468 aa9.13□□□□□ -0.95
USP53-206ENST00000510737 ABHD15Q6UXT9 468 aa9.13□□□□□ -0.95
USP53-206ENST00000510737 PRIMA1Q86XR5 153 aa9.13□□□□□ -0.95
USP53-206ENST00000510737 WDR11Q9BZH6 1224 aa9.13□□□□□ -0.95
USP53-206ENST00000510737 AKIP1Q9NQ31 210 aa9.13□□□□□ -0.95
USP53-206ENST00000510737 CROCC2H7BZ55 1655 aa9.13□□□□□ -0.95
USP53-206ENST00000510737 ANKRD30AQ9BXX3 1397 aa9.12□□□□□ -0.95
USP53-206ENST00000510737 NWD2Q9ULI1 1742 aa9.12□□□□□ -0.95
USP53-206ENST00000510737 ZNF185O15231 689 aa9.12□□□□□ -0.95
USP53-206ENST00000510737 RNASE9P60153 205 aaKnown RBP9.12□□□□□ -0.95
USP53-206ENST00000510737 CCDC178Q5BJE1 867 aa9.12□□□□□ -0.95
USP53-206ENST00000510737 IQSEC1Q6DN90 963 aa9.12□□□□□ -0.95
USP53-206ENST00000510737 OLFML1Q6UWY5 402 aa9.12□□□□□ -0.95
USP53-206ENST00000510737 LMBR1LQ6UX01 489 aa9.12□□□□□ -0.95
USP53-206ENST00000510737 C16orf86Q6ZW13 317 aa9.12□□□□□ -0.95
USP53-206ENST00000510737 KRT28Q7Z3Y7 464 aa9.12□□□□□ -0.95
USP53-206ENST00000510737 PRDM13Q9H4Q3 707 aa9.12□□□□□ -0.95
USP53-206ENST00000510737 FANCLQ9NW38 375 aa9.12□□□□□ -0.95
USP53-206ENST00000510737 HDAC5Q9UQL6 1122 aa9.12□□□□□ -0.95
USP53-206ENST00000510737 ADGRL2O95490 1459 aa9.12□□□□□ -0.95
USP53-206ENST00000510737 DAPK1P53355 1430 aa9.12□□□□□ -0.95
USP53-206ENST00000510737 MYOM1P52179 1685 aa9.11□□□□□ -0.95
USP53-206ENST00000510737 PPFIA4O75335 1185 aa9.11□□□□□ -0.95
USP53-206ENST00000510737 FBLP22087 321 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms