RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 FAM205CA6NFA0 338 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 FDX1P10109 184 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 LCP1P13796 627 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 TTC23LQ6PF05 361 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 PPHLN1Q8NEY8 458 aaKnown RBP11.16□□□□□ -0.62
NEK1-206ENST00000510533 GFM2Q969S9 779 aaKnown RBP11.16□□□□□ -0.62
NEK1-206ENST00000510533 ASIC4Q96FT7 647 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 FAM84BQ96KN1 310 aaPredicted RBP11.16□□□□□ -0.62
NEK1-206ENST00000510533 C9orf72Q96LT7 481 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 BATF3Q9NR55 127 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 PKD2L2Q9NZM6 624 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 MOSPD1Q9UJG1 213 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 MED14O60244 1454 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 hCG_2014768A0A024R1R8 64 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 AP3B1O00203 1094 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 LSP1P33241 339 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 ABCE1P61221 599 aaKnown RBP11.15□□□□□ -0.62
NEK1-206ENST00000510533 CDK17Q00537 523 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 C4orf33Q8N1A6 199 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 SPATA33Q96N06 139 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 SPON2Q9BUD6 331 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 NEUROG2Q9H2A3 272 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 WDR35Q9P2L0 1181 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 PRKAG2Q9UGJ0 569 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 POLIQ9UNA4 740 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 RAD51CO43502 376 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 SEC24DO94855 1032 aaPredicted RBP11.15□□□□□ -0.62
NEK1-206ENST00000510533 APOA1P02647 267 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 RANBP1P43487 201 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 SERPINB9P50453 376 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 HSD17B4P51659 736 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 BTBD8Q5XKL5 378 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 OR2W6PQ8NHA6 318 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 CPA5Q8WXQ8 436 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 RIN2Q8WYP3 895 aaPredicted RBP11.15□□□□□ -0.62
NEK1-206ENST00000510533 ADAM33Q9BZ11 813 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 ZC3H7BQ9UGR2 993 aaKnown RBP11.15□□□□□ -0.62
NEK1-206ENST00000510533 CYP19A1P11511 503 aaPredicted RBP11.15□□□□□ -0.62
NEK1-206ENST00000510533 SERPINB10P48595 397 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 MAP3K10Q02779 954 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 SPP2Q13103 211 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 TRPM8Q7Z2W7 1104 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 JAMLQ86YT9 394 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 EPAS1Q99814 870 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 SH3GL3Q99963 347 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 FOXP3Q9BZS1 431 aa11.15□□□□□ -0.62
NEK1-206ENST00000510533 A0A1W2PQJ5 194 aa11.15□□□□□ -0.63
NEK1-206ENST00000510533 APRTP07741 180 aa11.15□□□□□ -0.63
NEK1-206ENST00000510533 GFAPP14136 432 aa11.15□□□□□ -0.63
NEK1-206ENST00000510533 ERFP50548 548 aa11.15□□□□□ -0.63
NEK1-206ENST00000510533 KLC1Q07866 573 aa11.15□□□□□ -0.63
NEK1-206ENST00000510533 ZNF235Q14590 738 aa11.15□□□□□ -0.63
NEK1-206ENST00000510533 ATG9AQ7Z3C6 839 aa11.15□□□□□ -0.63
NEK1-206ENST00000510533 LDHDQ86WU2 507 aa11.15□□□□□ -0.63
NEK1-206ENST00000510533 TAGAPQ8N103 731 aa11.15□□□□□ -0.63
NEK1-206ENST00000510533 URGCPQ8TCY9 931 aa11.15□□□□□ -0.63
NEK1-206ENST00000510533 ASAP3Q8TDY4 903 aa11.15□□□□□ -0.63
NEK1-206ENST00000510533 IGDCC4Q8TDY8 1250 aa11.15□□□□□ -0.63
NEK1-206ENST00000510533 ERP27Q96DN0 273 aa11.15□□□□□ -0.63
NEK1-206ENST00000510533 ARHGEF26Q96DR7 871 aa11.15□□□□□ -0.63
NEK1-206ENST00000510533 CLMNQ96JQ2 1002 aa11.15□□□□□ -0.63
NEK1-206ENST00000510533 TNIP3Q96KP6 325 aa11.15□□□□□ -0.63
NEK1-206ENST00000510533 PPP1R36Q96LQ0 422 aa11.15□□□□□ -0.63
NEK1-206ENST00000510533 NR1H4Q96RI1 486 aaPredicted RBP11.15□□□□□ -0.63
NEK1-206ENST00000510533 KCNK16Q96T55 309 aa11.15□□□□□ -0.63
NEK1-206ENST00000510533 ROPN1BQ9BZX4 212 aaPredicted RBP11.15□□□□□ -0.63
NEK1-206ENST00000510533 ROPN1Q9HAT0 212 aaPredicted RBP11.15□□□□□ -0.63
NEK1-206ENST00000510533 AFF4Q9UHB7 1163 aaKnown RBP11.15□□□□□ -0.63
NEK1-206ENST00000510533 XPO7Q9UIA9 1087 aaKnown RBP11.15□□□□□ -0.63
NEK1-206ENST00000510533 PCDHGB4Q9UN71 923 aa11.15□□□□□ -0.63
NEK1-206ENST00000510533 SLC26A4O43511 780 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 CCND1P24385 295 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 TPI1P60174 286 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 STK4Q13043 487 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 WDR72Q3MJ13 1102 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 THAP11Q96EK4 314 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 REEP2Q9BRK0 252 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 TMEM117Q9H0C3 514 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 PLEKHA5Q9HAU0 1116 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 MAD2L2Q9UI95 211 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 TSR3Q9UJK0 312 aaKnown RBP11.14□□□□□ -0.63
NEK1-206ENST00000510533 H0Y626 953 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 NEMP1O14524 444 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 TRIM16O95361 564 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 HNRNPCP07910 306 aaKnown RBP eCLIP11.14□□□□□ -0.634e-6■□□□□ 8.4
NEK1-206ENST00000510533 NNMTP40261 264 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 ZNF200P98182 395 aaPredicted RBP11.14□□□□□ -0.63
NEK1-206ENST00000510533 EDRF1Q3B7T1 1238 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 PATL1Q86TB9 770 aaKnown RBP11.14□□□□□ -0.63
NEK1-206ENST00000510533 RMDN1Q96DB5 314 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 CYFIP2Q96F07 1278 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 ZIM3Q96PE6 472 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 KDM4CQ9H3R0 1056 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 RAB6BQ9NRW1 208 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 PSD3Q9NYI0 1048 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 ZNF711Q9Y462 761 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 C3orf70A6NLC5 250 aaPredicted RBP11.14□□□□□ -0.63
NEK1-206ENST00000510533 ZSCAN9O15535 394 aaPredicted RBP11.14□□□□□ -0.63
NEK1-206ENST00000510533 PRKCBP05771 671 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 ADNPQ9H2P0 1102 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms