RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 ZNF507Q8TCN5 953 aa12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 SLC22A17Q8WUG5 538 aa12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 AUTS2Q8WXX7 1259 aa12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 ACCSQ96QU6 501 aa12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 HERC2P3Q9BVR0 1158 aa12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 BLZF1Q9H2G9 400 aa12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 GOLPH3LQ9H4A5 285 aa12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 RXFP1Q9HBX9 757 aa12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 SLC38A7Q9NVC3 462 aa12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 FSD2A1L4K1 749 aa12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 GRXCR2A6NFK2 248 aa12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 LACTBL1A8MY62 500 aa12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 TADA2AO75478 443 aa12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 PRPF6O94906 941 aaKnown RBP12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 GCNT3O95395 438 aa12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 CXCL8P10145 99 aa12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 AFMP43652 599 aa12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 CLCNKBP51801 687 aa12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 ASIC1P78348 528 aa12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 BMS1Q14692 1282 aaKnown RBP12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 POSTNQ15063 836 aa12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 CEP57L1Q8IYX8 460 aa12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 C18orf25Q96B23 403 aaPredicted RBP12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 DDX27Q96GQ7 796 aaKnown RBP12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 UROC1Q96N76 676 aa12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 KLHL5Q96PQ7 755 aa12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 TSPAN18Q96SJ8 248 aa12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 MSTO1Q9BUK6 570 aa12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 S1PR5Q9H228 398 aa12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 EXOC7Q9UPT5 735 aa12.81□□□□□ -0.36
HMGXB3-203ENST00000510472 PLXNA4Q9HCM2 1894 aa12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 MYH15Q9Y2K3 1946 aa12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 EIF3DO15371 548 aaKnown RBP eCLIP12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 B3GAT3O94766 335 aa12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 MYL1P05976 194 aa12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 CNPP09543 421 aaKnown RBP12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 GARTP22102 1010 aa12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 RPL9P32969 192 aaKnown RBP12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 SYKP43405 635 aa12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 USP41Q3LFD5 358 aa12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 PUS10Q3MIT2 529 aaKnown RBP12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 FAM26FQ5R3K3 315 aa12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 SYCE2Q6PIF2 218 aa12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 FSIP1Q8NA03 581 aa12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 SMRP1Q8NCR6 262 aa12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 C3orf58Q8NDZ4 430 aa12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 ENGASEQ8NFI3 743 aa12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 SCFD1Q8WVM8 642 aa12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 TMEM206Q9H813 350 aa12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 RPF1Q9H9Y2 349 aaKnown RBP12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 GOLGA2P5Q9HBQ8 144 aa12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 MRPL17Q9NRX2 175 aaKnown RBP12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 AGO2Q9UKV8 859 aaKnown RBP12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 SSX2IPQ9Y2D8 614 aa12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 HCFC2Q9Y5Z7 792 aa12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 SF3B1O75533 1304 aaKnown RBP eCLIP12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 TTC28Q96AY4 2481 aa12.8□□□□□ -0.36
HMGXB3-203ENST00000510472 TGFB1I1O43294 461 aa12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 ZNF202O95125 648 aa12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 C1RP00736 705 aa12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 CYP3A5P20815 502 aa12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 FGFR3P22607 806 aa12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 LRPAP1P30533 357 aa12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 MATR3P43243 847 aaKnown RBP eCLIP12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 GLUD2P49448 558 aa12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 ACOT2P49753 483 aa12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 SNW1Q13573 536 aaKnown RBP12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 BMT2Q1RMZ1 405 aa12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 PTCRAQ6ISU1 281 aaPredicted RBP12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 ANKRD54Q6NXT1 300 aa12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 KRBA2Q6ZNG9 492 aa12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 CD302Q8IX05 232 aa12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 FMR1NBQ8N0W7 255 aaPredicted RBP12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 ZSWIM2Q8NEG5 633 aa12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 LNX1Q8TBB1 728 aaPredicted RBP12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 PIK3R5Q8WYR1 880 aa12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 POMGNT1Q8WZA1 660 aa12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 B3GALT6Q96L58 329 aa12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 ASB7Q9H672 318 aa12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 FNIP2Q9P278 1114 aa12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 BARX2Q9UMQ3 279 aaPredicted RBP12.79□□□□□ -0.36
HMGXB3-203ENST00000510472 ATG2AQ2TAZ0 1938 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 PODXLO00592 558 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 TEX28O15482 410 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 MBTPS2O43462 519 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 PAPLNO95428 1278 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 URODP06132 367 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 HOXB8P17481 243 aaPredicted RBP12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 NDUFV1P49821 464 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 CLCN4P51793 760 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 WNT7BP56706 349 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 SPAG1Q07617 926 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 DPYDQ12882 1025 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 ELAVL2Q12926 359 aaKnown RBP12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 STK4Q13043 487 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 SMAD4Q13485 552 aaKnown RBP12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 RTP2Q5QGT7 225 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 FAM171A1Q5VUB5 890 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 SPATA1Q5VX52 437 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms