RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 TOPORSQ9NS56 1045 aaPredicted RBP11.27□□□□□ -0.61
PFDN1-203ENST00000510217 CNTN3Q9P232 1028 aa11.27□□□□□ -0.61
PFDN1-203ENST00000510217 ANKFY1Q9P2R3 1169 aa11.27□□□□□ -0.61
PFDN1-203ENST00000510217 FBXO2Q9UK22 296 aaPredicted RBP11.27□□□□□ -0.61
PFDN1-203ENST00000510217 MTMR6Q9Y217 621 aa11.27□□□□□ -0.61
PFDN1-203ENST00000510217 HCN4Q9Y3Q4 1203 aa11.27□□□□□ -0.61
PFDN1-203ENST00000510217 TRIOO75962 3097 aa11.27□□□□□ -0.61
PFDN1-203ENST00000510217 SMIM28A0A1B0GU29 152 aa11.26□□□□□ -0.61
PFDN1-203ENST00000510217 TGM5O43548 720 aa11.26□□□□□ -0.61
PFDN1-203ENST00000510217 TOM1L1O75674 476 aa11.26□□□□□ -0.61
PFDN1-203ENST00000510217 RFPL2O75678 378 aa11.26□□□□□ -0.61
PFDN1-203ENST00000510217 MYBP10242 640 aa11.26□□□□□ -0.61
PFDN1-203ENST00000510217 HARSP12081 509 aaKnown RBP11.26□□□□□ -0.61
PFDN1-203ENST00000510217 MARCKSP29966 332 aaPredicted RBP11.26□□□□□ -0.61
PFDN1-203ENST00000510217 SMTNP53814 917 aa11.26□□□□□ -0.61
PFDN1-203ENST00000510217 YARSP54577 528 aaKnown RBP11.26□□□□□ -0.61
PFDN1-203ENST00000510217 CREMQ03060 361 aa11.26□□□□□ -0.61
PFDN1-203ENST00000510217 MCL1Q07820 350 aa11.26□□□□□ -0.61
PFDN1-203ENST00000510217 STRN3Q13033 797 aa11.26□□□□□ -0.61
PFDN1-203ENST00000510217 DHX8Q14562 1220 aaKnown RBP11.26□□□□□ -0.61
PFDN1-203ENST00000510217 UPP1Q16831 310 aa11.26□□□□□ -0.61
PFDN1-203ENST00000510217 SPECC1Q5M775 1068 aa11.26□□□□□ -0.61
PFDN1-203ENST00000510217 ATAT1Q5SQI0 421 aa11.26□□□□□ -0.61
PFDN1-203ENST00000510217 FAM171A1Q5VUB5 890 aa11.26□□□□□ -0.61
PFDN1-203ENST00000510217 ZPBP2Q6X784 338 aa11.26□□□□□ -0.61
PFDN1-203ENST00000510217 USP49Q70CQ1 688 aa11.26□□□□□ -0.61
PFDN1-203ENST00000510217 CMASQ8NFW8 434 aaPredicted RBP11.26□□□□□ -0.61
PFDN1-203ENST00000510217 LARP4BQ92615 738 aaKnown RBP11.26□□□□□ -0.61
PFDN1-203ENST00000510217 EPSTI1Q96J88 318 aa11.26□□□□□ -0.61
PFDN1-203ENST00000510217 UROC1Q96N76 676 aa11.26□□□□□ -0.61
PFDN1-203ENST00000510217 FIZ1Q96SL8 496 aa11.26□□□□□ -0.61
PFDN1-203ENST00000510217 TTPALQ9BTX7 342 aa11.26□□□□□ -0.61
PFDN1-203ENST00000510217 HAPLN2Q9GZV7 340 aa11.26□□□□□ -0.61
PFDN1-203ENST00000510217 LARSQ9P2J5 1176 aaKnown RBP11.26□□□□□ -0.61
PFDN1-203ENST00000510217 TMEM221A6NGB7 291 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 H0YCG3 227 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 K7ENM7 598 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 M0R296 226 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 ADAM12O43184 909 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 STX6O43752 255 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 B3GAT3O94766 335 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 FAM13AO94988 1023 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 C1RP00736 705 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 SPATA31D3P0C874 917 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 PDIA4P13667 645 aaKnown RBP11.25□□□□□ -0.61
PFDN1-203ENST00000510217 KCNE1P15382 129 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 SIGLEC14Q08ET2 396 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 CCDC173Q0VFZ6 552 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 ELAVL2Q12926 359 aaKnown RBP11.25□□□□□ -0.61
PFDN1-203ENST00000510217 PSMD5Q16401 504 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 SEZ6Q53EL9 994 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 LILRA6Q6PI73 481 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.25□□□□□ -0.61
PFDN1-203ENST00000510217 TRIM67Q6ZTA4 783 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 SPATA31D4Q6ZUB0 917 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 CCDC149Q6ZUS6 474 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 HAUS6Q7Z4H7 955 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 CEP57Q86XR8 500 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 PALB2Q86YC2 1186 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 ZDHHC14Q8IZN3 488 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 RASSF8Q8NHQ8 419 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 LNX1Q8TBB1 728 aaPredicted RBP11.25□□□□□ -0.61
PFDN1-203ENST00000510217 HDAC7Q8WUI4 952 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 ZNF707Q96C28 371 aaPredicted RBP11.25□□□□□ -0.61
PFDN1-203ENST00000510217 ASIC4Q96FT7 647 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 CLIC6Q96NY7 704 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 ACAP3Q96P50 834 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 USP28Q96RU2 1077 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 CLSTN3Q9BQT9 956 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 TCHPQ9BT92 498 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 RHOBTB2Q9BYZ6 727 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 PANK2Q9BZ23 570 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 PARVGQ9HBI0 331 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 DPP7Q9UHL4 492 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 KCNG1Q9UIX4 513 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 FBXW11Q9UKB1 542 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 USTQ9Y2C2 406 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 SRPRBQ9Y5M8 271 aaKnown RBP11.25□□□□□ -0.61
PFDN1-203ENST00000510217 MORC2Q9Y6X9 1032 aaPredicted RBP11.25□□□□□ -0.61
PFDN1-203ENST00000510217 TSC2P49815 1807 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 ANK1P16157 1881 aa11.25□□□□□ -0.61
PFDN1-203ENST00000510217 ZNF318Q5VUA4 2279 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 CCDC195A0A1B0GUA6 201 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 PODXLO00592 558 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 FAM189A1O60320 539 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 N4BP1O75113 896 aaKnown RBP11.24□□□□□ -0.61
PFDN1-203ENST00000510217 TBCAO75347 108 aaKnown RBP11.24□□□□□ -0.61
PFDN1-203ENST00000510217 PIGRP01833 764 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 PRR29P0C7W0 189 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 CXCL8P10145 99 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 FGFR3P22607 806 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 TKTP29401 623 aaKnown RBP11.24□□□□□ -0.61
PFDN1-203ENST00000510217 PLA2G5P39877 138 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 BRCC3P46736 316 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 CEBPZQ03701 1054 aaKnown RBP11.24□□□□□ -0.61
PFDN1-203ENST00000510217 SLC10A6Q3KNW5 377 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 ZSCAN23Q3MJ62 389 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 SLC39A4Q6P5W5 647 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 ELMSAN1Q6PJG2 1045 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 GAS2L3Q86XJ1 694 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms