RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-223	ENST00000510199	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	12.95	□□□□□ -0.34
RACK1-223	ENST00000510199	ZNF365	Q70YC5	407 aa		12.95	□□□□□ -0.34
RACK1-223	ENST00000510199	NPAS4	Q8IUM7	802 aa		12.95	□□□□□ -0.34
RACK1-223	ENST00000510199	EFCAB13	Q8IY85	973 aa		12.95	□□□□□ -0.34
RACK1-223	ENST00000510199	CACTIN	Q8WUQ7	758 aa	Known RBP	12.95	□□□□□ -0.34
RACK1-223	ENST00000510199	RSPH1	Q8WYR4	309 aa		12.95	□□□□□ -0.34
RACK1-223	ENST00000510199	ZNF516	Q92618	1163 aa		12.95	□□□□□ -0.34
RACK1-223	ENST00000510199	ANKRD36BP1	Q96IX9	119 aa		12.95	□□□□□ -0.34
RACK1-223	ENST00000510199	NAP1L5	Q96NT1	182 aa	Predicted RBP	12.95	□□□□□ -0.34
RACK1-223	ENST00000510199	RPS6KC1	Q96S38	1066 aa		12.95	□□□□□ -0.34
RACK1-223	ENST00000510199	GAD1	Q99259	594 aa		12.95	□□□□□ -0.34
RACK1-223	ENST00000510199	POP1	Q99575	1024 aa	Known RBP	12.95	□□□□□ -0.34
RACK1-223	ENST00000510199	TMEM8A	Q9HCN3	771 aa		12.95	□□□□□ -0.34
RACK1-223	ENST00000510199	RTN4	Q9NQC3	1192 aa	Known RBP	12.95	□□□□□ -0.34
RACK1-223	ENST00000510199	INTS13	Q9NVM9	706 aa		12.95	□□□□□ -0.34
RACK1-223	ENST00000510199	IFNK	Q9P0W0	207 aa		12.95	□□□□□ -0.34
RACK1-223	ENST00000510199	PCDH10	Q9P2E7	1040 aa		12.95	□□□□□ -0.34
RACK1-223	ENST00000510199	LRFN2	Q9ULH4	789 aa		12.95	□□□□□ -0.34
RACK1-223	ENST00000510199	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	12.95	□□□□□ -0.34
RACK1-223	ENST00000510199	PTPRJ	Q12913	1337 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	SMIM28	A0A1B0GU29	152 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	GTPBP10	A4D1E9	387 aa	Known RBP	12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	TULP1	O00294	542 aa	Predicted RBP	12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	PES1	O00541	588 aa	Known RBP	12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	PTGES	O14684	152 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	P4HA2	O15460	535 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	AP5Z1	O43299	807 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	HOXA2	O43364	376 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	XPOT	O43592	962 aa	Known RBP	12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	OFD1	O75665	1012 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	C4BPA	P04003	597 aa	Known RBP	12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	TPM3	P06753	285 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	NFIC	P08651	508 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	TMEM191B	P0C7N4	346 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	MLH1	P40692	756 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	GCLM	P48507	274 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	MXI1	P50539	228 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	EPHB4	P54760	987 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	WDR5	P61964	334 aa	Known RBP	12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	NR1I3	Q14994	352 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	ZBTB6	Q15916	424 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	LMBRD2	Q68DH5	695 aa	Predicted RBP	12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	KRT39	Q6A163	491 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	GLB1L	Q6UWU2	654 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	C15orf39	Q6ZRI6	1047 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	OTOP2	Q7RTS6	562 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	GSTCD	Q8NEC7	633 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	TOP1MT	Q969P6	601 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	KIF12	Q96FN5	646 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	ZFP42	Q96MM3	310 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	ZMAT2	Q96NC0	199 aa	Known RBP	12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	12.94	□□□□□ -0.34	6e-8	■■□□□ 13.9
RACK1-223	ENST00000510199	TRIM5	Q9C035	493 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	TMEM117	Q9H0C3	514 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	CXCL16	Q9H2A7	254 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	RNF19A	Q9NV58	838 aa		12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	UBQLN1	Q9UMX0	589 aa	Known RBP	12.94	□□□□□ -0.34
RACK1-223	ENST00000510199	COL4A6	Q14031	1691 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	TNNC2	P02585	160 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	TH	P07101	528 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	CYP3A5	P20815	502 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	KCNJ6	P48051	423 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	RGS19	P49795	217 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	TFAM	Q00059	246 aa	Known RBP	12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	MYL7	Q01449	175 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	UBXN1	Q04323	297 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	CETN1	Q12798	172 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	ZACN	Q401N2	412 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	CBWD6	Q4V339	395 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	CBWD3	Q5JTY5	395 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	GLRA4	Q5JXX5	417 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	CLLU1OS	Q5K130	101 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	CBWD5	Q5RIA9	395 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	FKBP15	Q5T1M5	1219 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	SV2A	Q7L0J3	742 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	TRAPPC11	Q7Z392	1133 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	BEST2	Q8NFU1	509 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	OR5B17	Q8NGF7	314 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	URGCP	Q8TCY9	931 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	HELQ	Q8TDG4	1101 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	HERVK_113	Q902F9	699 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	PPP1R10	Q96QC0	940 aa	Known RBP	12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	XPO4	Q9C0E2	1151 aa	Known RBP	12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	MTMR12	Q9C0I1	747 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	MMRN2	Q9H8L6	949 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	SLC38A7	Q9NVC3	462 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	MIOS	Q9NXC5	875 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	KANSL3	Q9P2N6	904 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	COQ4	Q9Y3A0	265 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	CEP290	O15078	2479 aa		12.93	□□□□□ -0.34
RACK1-223	ENST00000510199	ZBBX	A8MT70	800 aa		12.92	□□□□□ -0.34
RACK1-223	ENST00000510199	TEX33	O43247	280 aa		12.92	□□□□□ -0.34
RACK1-223	ENST00000510199	UPP2	O95045	317 aa		12.92	□□□□□ -0.34
RACK1-223	ENST00000510199	FGFR1	P11362	822 aa		12.92	□□□□□ -0.34
RACK1-223	ENST00000510199	SCNN1G	P51170	649 aa		12.92	□□□□□ -0.34
RACK1-223	ENST00000510199	AFF1	P51825	1210 aa	Known RBP	12.92	□□□□□ -0.34
RACK1-223	ENST00000510199	DEFB103A	P81534	67 aa		12.92	□□□□□ -0.34
RACK1-223	ENST00000510199	GRIK3	Q13003	919 aa		12.92	□□□□□ -0.34
RACK1-223	ENST00000510199	NOMO2	Q5JPE7	1267 aa		12.92	□□□□□ -0.34
RACK1-223	ENST00000510199	TDRD10	Q5VZ19	366 aa	Known RBP	12.92	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms