RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 TRAPPC10P48553 1259 aa16.3■□□□□ 0.2
SMAD5-206ENST00000509962 FXR2P51116 673 aaKnown RBP eCLIP16.3■□□□□ 0.2
SMAD5-206ENST00000509962 PFKPQ01813 784 aa16.3■□□□□ 0.2
SMAD5-206ENST00000509962 ST3GAL1Q11201 340 aa16.3■□□□□ 0.2
SMAD5-206ENST00000509962 PABPC1LQ4VXU2 614 aaKnown RBP16.3■□□□□ 0.2
SMAD5-206ENST00000509962 FAM184AQ8NB25 1140 aa16.3■□□□□ 0.2
SMAD5-206ENST00000509962 FBXO18Q8NFZ0 1043 aa16.3■□□□□ 0.2
SMAD5-206ENST00000509962 DDX27Q96GQ7 796 aaKnown RBP16.3■□□□□ 0.2
SMAD5-206ENST00000509962 CCDC94Q9BW85 323 aaPredicted RBP16.3■□□□□ 0.2
SMAD5-206ENST00000509962 RAB34Q9BZG1 259 aa16.3■□□□□ 0.2
SMAD5-206ENST00000509962 FOXQ1Q9C009 403 aa16.3■□□□□ 0.2
SMAD5-206ENST00000509962 TOPORSQ9NS56 1045 aaPredicted RBP16.3■□□□□ 0.2
SMAD5-206ENST00000509962 DDX19AQ9NUU7 478 aaKnown RBP16.3■□□□□ 0.2
SMAD5-206ENST00000509962 HCFC1R1Q9NWW0 138 aa16.3■□□□□ 0.2
SMAD5-206ENST00000509962 PPP4R2Q9NY27 417 aa16.3■□□□□ 0.2
SMAD5-206ENST00000509962 KCNH3Q9ULD8 1083 aa16.3■□□□□ 0.2
SMAD5-206ENST00000509962 DNM3Q9UQ16 869 aa16.3■□□□□ 0.2
SMAD5-206ENST00000509962 SP9P0CG40 484 aa16.29■□□□□ 0.2
SMAD5-206ENST00000509962 IGFBP6P24592 240 aaPredicted RBP16.29■□□□□ 0.2
SMAD5-206ENST00000509962 TKTP29401 623 aaKnown RBP16.29■□□□□ 0.2
SMAD5-206ENST00000509962 ELF1P32519 619 aa16.29■□□□□ 0.2
SMAD5-206ENST00000509962 PEX3P56589 373 aa16.29■□□□□ 0.2
SMAD5-206ENST00000509962 OSTNP61366 133 aa16.29■□□□□ 0.2
SMAD5-206ENST00000509962 HMGN5P82970 282 aaKnown RBP16.29■□□□□ 0.2
SMAD5-206ENST00000509962 PRKCQQ04759 706 aa16.29■□□□□ 0.2
SMAD5-206ENST00000509962 RSPO2Q6UXX9 243 aaPredicted RBP16.29■□□□□ 0.2
SMAD5-206ENST00000509962 C4orf32Q8N8J7 132 aa16.29■□□□□ 0.2
SMAD5-206ENST00000509962 ZNF461Q8TAF7 563 aa16.29■□□□□ 0.2
SMAD5-206ENST00000509962 ACO2Q99798 780 aaKnown RBP16.29■□□□□ 0.2
SMAD5-206ENST00000509962 TCHPQ9BT92 498 aa16.29■□□□□ 0.2
SMAD5-206ENST00000509962 BCO2Q9BYV7 579 aa16.29■□□□□ 0.2
SMAD5-206ENST00000509962 TMEM134Q9H6X4 195 aa16.29■□□□□ 0.2
SMAD5-206ENST00000509962 GOLGA2P5Q9HBQ8 144 aa16.29■□□□□ 0.2
SMAD5-206ENST00000509962 SLC38A7Q9NVC3 462 aa16.29■□□□□ 0.2
SMAD5-206ENST00000509962 MRPS23Q9Y3D9 190 aaKnown RBP16.29■□□□□ 0.2
SMAD5-206ENST00000509962 TRIP11Q15643 1979 aa16.28■□□□□ 0.2
SMAD5-206ENST00000509962 VWA8A3KMH1 1905 aa16.28■□□□□ 0.2
SMAD5-206ENST00000509962 MYH15Q9Y2K3 1946 aa16.28■□□□□ 0.2
SMAD5-206ENST00000509962 I3L4J1 428 aa16.28■□□□□ 0.2
SMAD5-206ENST00000509962 PTPN2P17706 415 aa16.28■□□□□ 0.2
SMAD5-206ENST00000509962 GRM5P41594 1212 aa16.28■□□□□ 0.2
SMAD5-206ENST00000509962 BRCC3P46736 316 aa16.28■□□□□ 0.2
SMAD5-206ENST00000509962 NPTX2P47972 431 aa16.28■□□□□ 0.2
SMAD5-206ENST00000509962 UBXN2BQ14CS0 331 aa16.28■□□□□ 0.2
SMAD5-206ENST00000509962 MLF2Q15773 248 aaPredicted RBP16.28■□□□□ 0.2
SMAD5-206ENST00000509962 CD300LGQ6UXG3 332 aa16.28■□□□□ 0.2
SMAD5-206ENST00000509962 ALKAL1Q6UXT8 129 aa16.28■□□□□ 0.2
SMAD5-206ENST00000509962 ERMP1Q7Z2K6 904 aa16.28■□□□□ 0.2
SMAD5-206ENST00000509962 SNX29Q8TEQ0 813 aa16.28■□□□□ 0.2
SMAD5-206ENST00000509962 ING5Q8WYH8 240 aa16.28■□□□□ 0.2
SMAD5-206ENST00000509962 MCRS1Q96EZ8 462 aa16.28■□□□□ 0.2
SMAD5-206ENST00000509962 ZSCAN31Q96LW9 406 aaPredicted RBP16.28■□□□□ 0.2
SMAD5-206ENST00000509962 ACAP3Q96P50 834 aa16.28■□□□□ 0.2
SMAD5-206ENST00000509962 KXD1Q9BQD3 176 aa16.28■□□□□ 0.2
SMAD5-206ENST00000509962 MRPL4Q9BYD3 311 aaKnown RBP16.28■□□□□ 0.2
SMAD5-206ENST00000509962 RBM19Q9Y4C8 960 aaKnown RBP16.28■□□□□ 0.2
SMAD5-206ENST00000509962 PHLPP2Q6ZVD8 1323 aa16.27■□□□□ 0.2
SMAD5-206ENST00000509962 FAM170BA6NMN3 283 aa16.27■□□□□ 0.2
SMAD5-206ENST00000509962 E9PMD0 336 aa16.27■□□□□ 0.2
SMAD5-206ENST00000509962 PRRG1O14668 218 aa16.27■□□□□ 0.2
SMAD5-206ENST00000509962 LRRN2O75325 713 aa16.27■□□□□ 0.2
SMAD5-206ENST00000509962 LRG1P02750 347 aa16.27■□□□□ 0.2
SMAD5-206ENST00000509962 GLULP15104 373 aa16.27■□□□□ 0.2
SMAD5-206ENST00000509962 ARPP19P56211 112 aa16.27■□□□□ 0.2
SMAD5-206ENST00000509962 PTGDRQ13258 359 aa16.27■□□□□ 0.2
SMAD5-206ENST00000509962 DMP1Q13316 513 aaPredicted RBP16.27■□□□□ 0.2
SMAD5-206ENST00000509962 NBR1Q14596 966 aa16.27■□□□□ 0.2
SMAD5-206ENST00000509962 ZNF568Q3ZCX4 644 aa16.27■□□□□ 0.2
SMAD5-206ENST00000509962 KRT79Q5XKE5 535 aa16.27■□□□□ 0.2
SMAD5-206ENST00000509962 NPAS3Q8IXF0 933 aa16.27■□□□□ 0.2
SMAD5-206ENST00000509962 C3orf58Q8NDZ4 430 aa16.27■□□□□ 0.2
SMAD5-206ENST00000509962 NELL2Q99435 816 aa16.27■□□□□ 0.2
SMAD5-206ENST00000509962 HINFPQ9BQA5 517 aa16.27■□□□□ 0.2
SMAD5-206ENST00000509962 OSBPL6Q9BZF3 934 aa16.27■□□□□ 0.2
SMAD5-206ENST00000509962 KMT5AQ9NQR1 393 aa16.27■□□□□ 0.2
SMAD5-206ENST00000509962 SPATA6Q9NWH7 488 aaPredicted RBP16.27■□□□□ 0.2
SMAD5-206ENST00000509962 GDE1Q9NZC3 331 aa16.27■□□□□ 0.2
SMAD5-206ENST00000509962 NUB1Q9Y5A7 615 aa16.27■□□□□ 0.2
SMAD5-206ENST00000509962 MYO15AQ9UKN7 3530 aa16.26■□□□□ 0.19
SMAD5-206ENST00000509962 H7C4K7 107 aa16.26■□□□□ 0.19
SMAD5-206ENST00000509962 LAMTOR5O43504 91 aa16.26■□□□□ 0.19
SMAD5-206ENST00000509962 HIP1RO75146 1068 aa16.26■□□□□ 0.19
SMAD5-206ENST00000509962 ABLIM3O94929 683 aa16.26■□□□□ 0.19
SMAD5-206ENST00000509962 SEC24BO95487 1268 aa16.26■□□□□ 0.19
SMAD5-206ENST00000509962 RHOP08100 348 aa16.26■□□□□ 0.19
SMAD5-206ENST00000509962 MCF2P10911 925 aa16.26■□□□□ 0.19
SMAD5-206ENST00000509962 RPL9P32969 192 aaKnown RBP16.26■□□□□ 0.19
SMAD5-206ENST00000509962 SOX4Q06945 474 aaPredicted RBP16.26■□□□□ 0.19
SMAD5-206ENST00000509962 XKR4Q5GH76 650 aa16.26■□□□□ 0.19
SMAD5-206ENST00000509962 SLC8B1Q6J4K2 584 aa16.26■□□□□ 0.19
SMAD5-206ENST00000509962 KIAA2013Q8IYS2 634 aa16.26■□□□□ 0.19
SMAD5-206ENST00000509962 CEP120Q8N960 986 aa16.26■□□□□ 0.19
SMAD5-206ENST00000509962 IGSF22Q8N9C0 903 aa16.26■□□□□ 0.19
SMAD5-206ENST00000509962 BORCS6Q96GS4 357 aa16.26■□□□□ 0.19
SMAD5-206ENST00000509962 DRC1Q96MC2 740 aa16.26■□□□□ 0.19
SMAD5-206ENST00000509962 DDX23Q9BUQ8 820 aaKnown RBP16.26■□□□□ 0.19
SMAD5-206ENST00000509962 TARS2Q9BW92 718 aaKnown RBP16.26■□□□□ 0.19
SMAD5-206ENST00000509962 CDT1Q9H211 546 aa16.26■□□□□ 0.19
SMAD5-206ENST00000509962 PTPRHQ9HD43 1115 aa16.26■□□□□ 0.19
SMAD5-206ENST00000509962 KCNG1Q9UIX4 513 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms