RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.53■□□□□ 0.4
RAB40C-202ENST00000509637 KCNK18Q7Z418 384 aa17.53■□□□□ 0.4
RAB40C-202ENST00000509637 CCDC83Q8IWF9 413 aa17.53■□□□□ 0.4
RAB40C-202ENST00000509637 SUMF1Q8NBK3 374 aa17.53■□□□□ 0.4
RAB40C-202ENST00000509637 DEPTORQ8TB45 409 aa17.53■□□□□ 0.4
RAB40C-202ENST00000509637 C2orf40Q9H1Z8 148 aa17.53■□□□□ 0.4
RAB40C-202ENST00000509637 CDT1Q9H211 546 aa17.53■□□□□ 0.4
RAB40C-202ENST00000509637 BHMT2Q9H2M3 363 aa17.53■□□□□ 0.4
RAB40C-202ENST00000509637 CDY1Q9Y6F8 540 aa17.53■□□□□ 0.4
RAB40C-202ENST00000509637 ZNF292O60281 2723 aa17.53■□□□□ 0.4
RAB40C-202ENST00000509637 DMXL1Q9Y485 3027 aa17.52■□□□□ 0.4
RAB40C-202ENST00000509637 B3GAT3O94766 335 aa17.52■□□□□ 0.4
RAB40C-202ENST00000509637 SEC24AO95486 1093 aa17.52■□□□□ 0.4
RAB40C-202ENST00000509637 LMNAP02545 664 aaKnown RBP17.52■□□□□ 0.4
RAB40C-202ENST00000509637 CDC25AP30304 524 aa17.52■□□□□ 0.4
RAB40C-202ENST00000509637 CREMQ03060 361 aa17.52■□□□□ 0.4
RAB40C-202ENST00000509637 ATF7IP2Q5U623 682 aa17.52■□□□□ 0.4
RAB40C-202ENST00000509637 TCEAL4Q96EI5 215 aa17.52■□□□□ 0.4
RAB40C-202ENST00000509637 MCRS1Q96EZ8 462 aa17.52■□□□□ 0.4
RAB40C-202ENST00000509637 ZBTB45Q96K62 511 aaPredicted RBP17.52■□□□□ 0.4
RAB40C-202ENST00000509637 ACO2Q99798 780 aaKnown RBP17.52■□□□□ 0.4
RAB40C-202ENST00000509637 MMTAG2Q9BU76 263 aaKnown RBP17.52■□□□□ 0.4
RAB40C-202ENST00000509637 TNFSF13BQ9Y275 285 aa17.52■□□□□ 0.4
RAB40C-202ENST00000509637 MIA3Q5JRA6 1907 aa17.52■□□□□ 0.4
RAB40C-202ENST00000509637 E9PMD0 336 aa17.51■□□□□ 0.39
RAB40C-202ENST00000509637 POU2F2P09086 479 aa17.51■□□□□ 0.39
RAB40C-202ENST00000509637 FCARP24071 287 aa17.51■□□□□ 0.39
RAB40C-202ENST00000509637 CCT6AP40227 531 aaKnown RBP17.51■□□□□ 0.39
RAB40C-202ENST00000509637 CCR2P41597 374 aa17.51■□□□□ 0.39
RAB40C-202ENST00000509637 RBM25P49756 843 aaKnown RBP17.51■□□□□ 0.39
RAB40C-202ENST00000509637 OSTNP61366 133 aa17.51■□□□□ 0.39
RAB40C-202ENST00000509637 MLF2Q15773 248 aaPredicted RBP17.51■□□□□ 0.39
RAB40C-202ENST00000509637 TTC38Q5R3I4 469 aa17.51■□□□□ 0.39
RAB40C-202ENST00000509637 LIN9Q5TKA1 542 aa17.51■□□□□ 0.39
RAB40C-202ENST00000509637 TANGO2Q6ICL3 276 aa17.51■□□□□ 0.39
RAB40C-202ENST00000509637 KIAA2013Q8IYS2 634 aa17.51■□□□□ 0.39
RAB40C-202ENST00000509637 ZNF687Q8N1G0 1237 aa17.51■□□□□ 0.39
RAB40C-202ENST00000509637 KIF2CQ99661 725 aa17.51■□□□□ 0.39
RAB40C-202ENST00000509637 RUSC1Q9BVN2 902 aa17.51■□□□□ 0.39
RAB40C-202ENST00000509637 TARS2Q9BW92 718 aaKnown RBP17.51■□□□□ 0.39
RAB40C-202ENST00000509637 KIAA1024Q9UPX6 916 aa17.51■□□□□ 0.39
RAB40C-202ENST00000509637 BACE2Q9Y5Z0 518 aa17.51■□□□□ 0.39
RAB40C-202ENST00000509637 ZFP37Q9Y6Q3 630 aaPredicted RBP17.51■□□□□ 0.39
RAB40C-202ENST00000509637 WDR87Q6ZQQ6 2873 aa17.51■□□□□ 0.39
RAB40C-202ENST00000509637 PATJQ8NI35 1801 aa17.51■□□□□ 0.39
RAB40C-202ENST00000509637 NCANO14594 1321 aa17.5■□□□□ 0.39
RAB40C-202ENST00000509637 KANSL1LA0AUZ9 987 aa17.5■□□□□ 0.39
RAB40C-202ENST00000509637 MED19A0JLT2 244 aaPredicted RBP17.5■□□□□ 0.39
RAB40C-202ENST00000509637 WDR27A2RRH5 827 aa17.5■□□□□ 0.39
RAB40C-202ENST00000509637 MOSPD3O75425 235 aa17.5■□□□□ 0.39
RAB40C-202ENST00000509637 ABLIM3O94929 683 aa17.5■□□□□ 0.39
RAB40C-202ENST00000509637 RHOP08100 348 aa17.5■□□□□ 0.39
RAB40C-202ENST00000509637 CEBPBP17676 345 aa17.5■□□□□ 0.39
RAB40C-202ENST00000509637 NPTX2P47972 431 aa17.5■□□□□ 0.39
RAB40C-202ENST00000509637 FXR2P51116 673 aaKnown RBP eCLIP17.5■□□□□ 0.39
RAB40C-202ENST00000509637 ROR1Q01973 937 aa17.5■□□□□ 0.39
RAB40C-202ENST00000509637 TRIM29Q14134 588 aa17.5■□□□□ 0.39
RAB40C-202ENST00000509637 MRPL58Q14197 206 aaKnown RBP17.5■□□□□ 0.39
RAB40C-202ENST00000509637 TMEM132AQ24JP5 1023 aa17.5■□□□□ 0.39
RAB40C-202ENST00000509637 UVSSAQ2YD98 709 aa17.5■□□□□ 0.39
RAB40C-202ENST00000509637 PABPC1LQ4VXU2 614 aaKnown RBP17.5■□□□□ 0.39
RAB40C-202ENST00000509637 PRSS36Q5K4E3 855 aa17.5■□□□□ 0.39
RAB40C-202ENST00000509637 FBXO18Q8NFZ0 1043 aa17.5■□□□□ 0.39
RAB40C-202ENST00000509637 KCNG4Q8TDN1 519 aa17.5■□□□□ 0.39
RAB40C-202ENST00000509637 C18orf25Q96B23 403 aaPredicted RBP17.5■□□□□ 0.39
RAB40C-202ENST00000509637 HAPLN2Q9GZV7 340 aa17.5■□□□□ 0.39
RAB40C-202ENST00000509637 DDX19AQ9NUU7 478 aaKnown RBP17.5■□□□□ 0.39
RAB40C-202ENST00000509637 PCDHB6Q9Y5E3 794 aa17.5■□□□□ 0.39
RAB40C-202ENST00000509637 FAM170BA6NMN3 283 aa17.49■□□□□ 0.39
RAB40C-202ENST00000509637 SFI1A8K8P3 1242 aa17.49■□□□□ 0.39
RAB40C-202ENST00000509637 PROZP22891 400 aa17.49■□□□□ 0.39
RAB40C-202ENST00000509637 TARSP26639 723 aaKnown RBP17.49■□□□□ 0.39
RAB40C-202ENST00000509637 GRM5P41594 1212 aa17.49■□□□□ 0.39
RAB40C-202ENST00000509637 PEX3P56589 373 aa17.49■□□□□ 0.39
RAB40C-202ENST00000509637 ELAVL2Q12926 359 aaKnown RBP17.49■□□□□ 0.39
RAB40C-202ENST00000509637 DCAF4L1Q3SXM0 396 aa17.49■□□□□ 0.39
RAB40C-202ENST00000509637 SEZ6Q53EL9 994 aa17.49■□□□□ 0.39
RAB40C-202ENST00000509637 SLC8B1Q6J4K2 584 aa17.49■□□□□ 0.39
RAB40C-202ENST00000509637 HS6ST3Q8IZP7 471 aa17.49■□□□□ 0.39
RAB40C-202ENST00000509637 IGSF22Q8N9C0 903 aa17.49■□□□□ 0.39
RAB40C-202ENST00000509637 C8orf76Q96K31 380 aa17.49■□□□□ 0.39
RAB40C-202ENST00000509637 ZSWIM3Q96MP5 696 aa17.49■□□□□ 0.39
RAB40C-202ENST00000509637 ADPGKQ9BRR6 497 aa17.49■□□□□ 0.39
RAB40C-202ENST00000509637 FOXP1Q9H334 677 aaPredicted RBP17.49■□□□□ 0.39
RAB40C-202ENST00000509637 LTB4R2Q9NPC1 389 aa17.49■□□□□ 0.39
RAB40C-202ENST00000509637 ARHGAP28Q9P2N2 729 aa17.49■□□□□ 0.39
RAB40C-202ENST00000509637 F5P12259 2224 aa17.48■□□□□ 0.39
RAB40C-202ENST00000509637 CEP250Q9BV73 2442 aa17.48■□□□□ 0.39
RAB40C-202ENST00000509637 CACNA1AO00555 2505 aa17.48■□□□□ 0.39
RAB40C-202ENST00000509637 ARHGEF37A1IGU5 675 aa17.48■□□□□ 0.39
RAB40C-202ENST00000509637 K7ERI5 159 aa17.48■□□□□ 0.39
RAB40C-202ENST00000509637 HIP1RO75146 1068 aa17.48■□□□□ 0.39
RAB40C-202ENST00000509637 VNN2O95498 520 aa17.48■□□□□ 0.39
RAB40C-202ENST00000509637 RFX1P22670 979 aa17.48■□□□□ 0.39
RAB40C-202ENST00000509637 VARS2Q5ST30 1063 aaKnown RBP17.48■□□□□ 0.39
RAB40C-202ENST00000509637 C1orf186Q6ZWK4 172 aa17.48■□□□□ 0.39
RAB40C-202ENST00000509637 SEMA4AQ9H3S1 761 aa17.48■□□□□ 0.39
RAB40C-202ENST00000509637 KCNH3Q9ULD8 1083 aa17.48■□□□□ 0.39
RAB40C-202ENST00000509637 COL4A2P08572 1712 aa17.47■□□□□ 0.39
RAB40C-202ENST00000509637 XYLBO75191 536 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms