RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 BSNDQ8WZ55 320 aa17.65■□□□□ 0.42
CXCL1-202ENST00000509101 SECISBP2LQ93073 1101 aaKnown RBP17.65■□□□□ 0.42
CXCL1-202ENST00000509101 CLDN23Q96B33 292 aa17.65■□□□□ 0.42
CXCL1-202ENST00000509101 BORCS6Q96GS4 357 aa17.65■□□□□ 0.42
CXCL1-202ENST00000509101 ADPGKQ9BRR6 497 aa17.65■□□□□ 0.42
CXCL1-202ENST00000509101 PLA2G2FQ9BZM2 168 aa17.65■□□□□ 0.42
CXCL1-202ENST00000509101 EPC1Q9H2F5 836 aa17.65■□□□□ 0.42
CXCL1-202ENST00000509101 BRMS1Q9HCU9 246 aa17.65■□□□□ 0.42
CXCL1-202ENST00000509101 USP18Q9UMW8 372 aa17.65■□□□□ 0.42
CXCL1-202ENST00000509101 CITO14578 2027 aa17.64■□□□□ 0.41
CXCL1-202ENST00000509101 NCAM2O15394 837 aa17.64■□□□□ 0.41
CXCL1-202ENST00000509101 PFKFB2O60825 505 aa17.64■□□□□ 0.41
CXCL1-202ENST00000509101 LILRB5O75023 590 aa17.64■□□□□ 0.41
CXCL1-202ENST00000509101 ECI2O75521 394 aa17.64■□□□□ 0.41
CXCL1-202ENST00000509101 CTDNEP1O95476 244 aa17.64■□□□□ 0.41
CXCL1-202ENST00000509101 RHOP08100 348 aa17.64■□□□□ 0.41
CXCL1-202ENST00000509101 CEBPBP17676 345 aa17.64■□□□□ 0.41
CXCL1-202ENST00000509101 ATP2B1P20020 1258 aa17.64■□□□□ 0.41
CXCL1-202ENST00000509101 TKTP29401 623 aaKnown RBP17.64■□□□□ 0.41
CXCL1-202ENST00000509101 RPS9P46781 194 aaKnown RBP17.64■□□□□ 0.41
CXCL1-202ENST00000509101 ATXN1P54253 815 aaKnown RBP17.64■□□□□ 0.41
CXCL1-202ENST00000509101 MAPK6Q16659 721 aa17.64■□□□□ 0.41
CXCL1-202ENST00000509101 ZNF852Q6ZMS4 543 aa17.64■□□□□ 0.41
CXCL1-202ENST00000509101 GPR161Q8N6U8 529 aaKnown RBP17.64■□□□□ 0.41
CXCL1-202ENST00000509101 DDX27Q96GQ7 796 aaKnown RBP17.64■□□□□ 0.41
CXCL1-202ENST00000509101 C2orf40Q9H1Z8 148 aa17.64■□□□□ 0.41
CXCL1-202ENST00000509101 GOLGA2P5Q9HBQ8 144 aa17.64■□□□□ 0.41
CXCL1-202ENST00000509101 PRMT8Q9NR22 394 aaPredicted RBP17.64■□□□□ 0.41
CXCL1-202ENST00000509101 CDV3Q9UKY7 258 aaKnown RBP17.64■□□□□ 0.41
CXCL1-202ENST00000509101 TPCN1Q9ULQ1 816 aa17.64■□□□□ 0.41
CXCL1-202ENST00000509101 TMEM189-UBE2V1I3L0A0 370 aa17.63■□□□□ 0.41
CXCL1-202ENST00000509101 I3L4J1 428 aa17.63■□□□□ 0.41
CXCL1-202ENST00000509101 EPB41L2O43491 1005 aaKnown RBP17.63■□□□□ 0.41
CXCL1-202ENST00000509101 KRT37O76014 449 aa17.63■□□□□ 0.41
CXCL1-202ENST00000509101 B3GAT3O94766 335 aa17.63■□□□□ 0.41
CXCL1-202ENST00000509101 SDHBP21912 280 aa17.63■□□□□ 0.41
CXCL1-202ENST00000509101 CLCNKBP51801 687 aa17.63■□□□□ 0.41
CXCL1-202ENST00000509101 LMNB2Q03252 620 aa17.63■□□□□ 0.41
CXCL1-202ENST00000509101 POTEHQ6S545 545 aa17.63■□□□□ 0.41
CXCL1-202ENST00000509101 WASF1Q92558 559 aa17.63■□□□□ 0.41
CXCL1-202ENST00000509101 NELL1Q92832 810 aa17.63■□□□□ 0.41
CXCL1-202ENST00000509101 NELL2Q99435 816 aa17.63■□□□□ 0.41
CXCL1-202ENST00000509101 CCDC113Q9H0I3 377 aa17.63■□□□□ 0.41
CXCL1-202ENST00000509101 GDE1Q9NZC3 331 aa17.63■□□□□ 0.41
CXCL1-202ENST00000509101 NDRG2Q9UN36 371 aaKnown RBP17.63■□□□□ 0.41
CXCL1-202ENST00000509101 MRPS17Q9Y2R5 130 aaKnown RBP17.63■□□□□ 0.41
CXCL1-202ENST00000509101 F5P12259 2224 aa17.63■□□□□ 0.41
CXCL1-202ENST00000509101 RALGAPA1Q6GYQ0 2036 aa17.62■□□□□ 0.41
CXCL1-202ENST00000509101 MED24O75448 989 aa17.62■□□□□ 0.41
CXCL1-202ENST00000509101 SPATA31C1P0DKV0 1188 aa17.62■□□□□ 0.41
CXCL1-202ENST00000509101 XRCC6P12956 609 aaKnown RBP eCLIP17.62■□□□□ 0.41
CXCL1-202ENST00000509101 BRCC3P46736 316 aa17.62■□□□□ 0.41
CXCL1-202ENST00000509101 FOSBP53539 338 aa17.62■□□□□ 0.41
CXCL1-202ENST00000509101 ADCY1Q08828 1119 aa17.62■□□□□ 0.41
CXCL1-202ENST00000509101 MTAPQ13126 283 aa17.62■□□□□ 0.41
CXCL1-202ENST00000509101 GRM2Q14416 872 aa17.62■□□□□ 0.41
CXCL1-202ENST00000509101 DCAF4L1Q3SXM0 396 aa17.62■□□□□ 0.41
CXCL1-202ENST00000509101 TANGO2Q6ICL3 276 aa17.62■□□□□ 0.41
CXCL1-202ENST00000509101 C3orf58Q8NDZ4 430 aa17.62■□□□□ 0.41
CXCL1-202ENST00000509101 DEPTORQ8TB45 409 aa17.62■□□□□ 0.41
CXCL1-202ENST00000509101 DNASE1L2Q92874 299 aa17.62■□□□□ 0.41
CXCL1-202ENST00000509101 ELSPBP1Q96BH3 223 aa17.62■□□□□ 0.41
CXCL1-202ENST00000509101 PPP1R10Q96QC0 940 aaKnown RBP17.62■□□□□ 0.41
CXCL1-202ENST00000509101 BACE2Q9Y5Z0 518 aa17.62■□□□□ 0.41
CXCL1-202ENST00000509101 MAP1BP46821 2468 aaKnown RBP17.62■□□□□ 0.41
CXCL1-202ENST00000509101 SHISA7A6NL88 538 aa17.61■□□□□ 0.41
CXCL1-202ENST00000509101 PRR5-ARHGAP8B1AHC4 643 aa17.61■□□□□ 0.41
CXCL1-202ENST00000509101 ACKR2O00590 384 aa17.61■□□□□ 0.41
CXCL1-202ENST00000509101 LRG1P02750 347 aa17.61■□□□□ 0.41
CXCL1-202ENST00000509101 FDPSP14324 419 aaKnown RBP17.61■□□□□ 0.41
CXCL1-202ENST00000509101 FCARP24071 287 aa17.61■□□□□ 0.41
CXCL1-202ENST00000509101 NAMPTP43490 491 aa17.61■□□□□ 0.41
CXCL1-202ENST00000509101 RBM25P49756 843 aaKnown RBP17.61■□□□□ 0.41
CXCL1-202ENST00000509101 ARHGAP8P85298 464 aa17.61■□□□□ 0.41
CXCL1-202ENST00000509101 ROR1Q01973 937 aa17.61■□□□□ 0.41
CXCL1-202ENST00000509101 FZD5Q13467 585 aa17.61■□□□□ 0.41
CXCL1-202ENST00000509101 CD300LGQ6UXG3 332 aa17.61■□□□□ 0.41
CXCL1-202ENST00000509101 ANKS3Q6ZW76 656 aa17.61■□□□□ 0.41
CXCL1-202ENST00000509101 RTL10Q7L3V2 364 aa17.61■□□□□ 0.41
CXCL1-202ENST00000509101 CATSPER3Q86XQ3 398 aa17.61■□□□□ 0.41
CXCL1-202ENST00000509101 MTMR9Q96QG7 549 aa17.61■□□□□ 0.41
CXCL1-202ENST00000509101 KIFC3Q9BVG8 833 aa17.61■□□□□ 0.41
CXCL1-202ENST00000509101 TMEM60Q9H2L4 133 aa17.61■□□□□ 0.41
CXCL1-202ENST00000509101 TUFT1Q9NNX1 390 aa17.61■□□□□ 0.41
CXCL1-202ENST00000509101 PARD6AQ9NPB6 346 aa17.61■□□□□ 0.41
CXCL1-202ENST00000509101 GMEB2Q9UKD1 530 aa17.61■□□□□ 0.41
CXCL1-202ENST00000509101 CHD8Q9HCK8 2581 aa17.61■□□□□ 0.41
CXCL1-202ENST00000509101 DCDC2BA2VCK2 349 aa17.6■□□□□ 0.41
CXCL1-202ENST00000509101 BTBD18B2RXH4 712 aa17.6■□□□□ 0.41
CXCL1-202ENST00000509101 PRRG1O14668 218 aa17.6■□□□□ 0.41
CXCL1-202ENST00000509101 TBC1D4O60343 1298 aa17.6■□□□□ 0.41
CXCL1-202ENST00000509101 LPAL2Q16609 132 aa17.6■□□□□ 0.41
CXCL1-202ENST00000509101 UPP1Q16831 310 aa17.6■□□□□ 0.41
CXCL1-202ENST00000509101 DIS3L2Q8IYB7 885 aaKnown RBP17.6■□□□□ 0.41
CXCL1-202ENST00000509101 TCEAL4Q96EI5 215 aa17.6■□□□□ 0.41
CXCL1-202ENST00000509101 UROC1Q96N76 676 aa17.6■□□□□ 0.41
CXCL1-202ENST00000509101 CORO1BQ9BR76 489 aa17.6■□□□□ 0.41
CXCL1-202ENST00000509101 BRD9Q9H8M2 597 aa17.6■□□□□ 0.41
CXCL1-202ENST00000509101 AVENQ9NQS1 362 aaPredicted RBP17.6■□□□□ 0.41
CXCL1-202ENST00000509101 ARHGEF37A1IGU5 675 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms