RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 MAP3K21Q5TCX8 1036 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 C6orf163Q5TEZ5 329 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 TMCO4Q5TGY1 634 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 CABP7Q86V35 215 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 LRRC6Q86X45 466 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 DNAAF5Q86Y56 855 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 DENND1AQ8TEH3 1009 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 CDK5RAP3Q96JB5 506 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 PLK2Q9NYY3 685 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 THEGQ9P2T0 379 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 SUGT1Q9Y2Z0 365 aa10.64□□□□□ -0.71
PDGFRA-207ENST00000509092 NCANO14594 1321 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 SYNGAP1Q96PV0 1343 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 A0A1W2PRG0 241 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 CFAP69A5D8W1 941 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 ANKRD63C9JTQ0 380 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 EIF3FO00303 357 aaPredicted RBP10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 PRPF4O43172 522 aaKnown RBP eCLIP10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 TRMUO75648 421 aaKnown RBP10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 CIB2O75838 187 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 IDH1O75874 414 aaKnown RBP10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 STK10O94804 968 aaKnown RBP10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 BAG2O95816 211 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 CLPTM1O96005 669 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 RARBP10826 455 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 TATP17735 454 aaPredicted RBP10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 VCLP18206 1134 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 CTNNA2P26232 953 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 CETN2P41208 172 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 CCR3P51677 355 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 SLC18A1P54219 525 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 CALCOCO2Q13137 446 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 SEC23AQ15436 765 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 NADK2Q4G0N4 442 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 ANKRD20A4Q4UJ75 823 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 TTC27Q6P3X3 843 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 BORAQ6PGQ7 559 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 PACS1Q6VY07 963 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 OTOAQ7RTW8 1153 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 LRP10Q7Z4F1 713 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 PRELID2Q8N945 189 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 PRPF31Q8WWY3 499 aaKnown RBP10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 LRRC59Q96AG4 307 aaKnown RBP10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 FAM161BQ96MY7 647 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 ZMAT2Q96NC0 199 aaKnown RBP10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 TTC1Q99614 292 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 RIC8AQ9NPQ8 531 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 AAASQ9NRG9 546 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 ASAP1Q9ULH1 1129 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 SYNPO2Q9UMS6 1093 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 NAALADL1Q9UQQ1 740 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 TSC22D4Q9Y3Q8 395 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 ANKRD36CQ5JPF3 1778 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 COL16A1Q07092 1604 aaPredicted RBP10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 DNAJC6O75061 913 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 FKBP6O75344 327 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 PDE6AP16499 860 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 PRKCIP41743 596 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 MCAMP43121 646 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 CLCN2P51788 898 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 ZNF211Q13398 564 aaPredicted RBP10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 MSLNQ13421 630 aaPredicted RBP10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 SMUG1Q53HV7 270 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 CCDC62Q6P9F0 684 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 CCDC137Q6PK04 289 aaKnown RBP10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 SYT2Q8N9I0 419 aaPredicted RBP10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 ZFP28Q8NHY6 868 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 ATP6V0A1Q93050 837 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 AK8Q96MA6 479 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 MRPS26Q9BYN8 205 aaKnown RBP10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 PLGRKTQ9HBL7 147 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 NPHS2Q9NP85 383 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 UBAP1Q9NZ09 502 aa10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.63□□□□□ -0.71
PDGFRA-207ENST00000509092 CNTNAP5Q8WYK1 1306 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 C15orf38-AP3S2A0A0A6YYH1 394 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 TCRBV5S4A2TA0A5A2 114 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 RASA4BC9J798 803 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 RASA4O43374 803 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 TBC1D12O60347 775 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 SPAG7O75391 227 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 GGPS1O95749 300 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 LDHAP00338 332 aaKnown RBP10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 ESRRAP11474 423 aaPredicted RBP10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 CETPP11597 493 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 PCSK6P29122 969 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 TMED10P49755 219 aaKnown RBP10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 ARPC4P59998 168 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 ACTR3P61158 418 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 PPATQ06203 517 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 NR1H3Q13133 447 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 SFT2D3Q587I9 215 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 TMEM63BQ5T3F8 832 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 RIPOR1Q6ZS17 1223 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 ARPINQ7Z6K5 226 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 VPS36Q86VN1 386 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 METTL25Q8N6Q8 603 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 TTLL11Q8NHH1 800 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 CCDC110Q8TBZ0 833 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms