RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 HNRNPDLO14979 420 aaKnown RBP16.19■□□□□ 0.18
UBE2D3-228ENST00000508974 CLDN3O15551 220 aa16.19■□□□□ 0.18
UBE2D3-228ENST00000508974 HSP90AA1P07900 732 aaKnown RBP16.19■□□□□ 0.18
UBE2D3-228ENST00000508974 NMT1P30419 496 aaKnown RBP16.19■□□□□ 0.18
UBE2D3-228ENST00000508974 BRCC3P46736 316 aa16.19■□□□□ 0.18
UBE2D3-228ENST00000508974 LIG4P49917 911 aa16.19■□□□□ 0.18
UBE2D3-228ENST00000508974 ZXDAP98168 799 aa16.19■□□□□ 0.18
UBE2D3-228ENST00000508974 SPAG1Q07617 926 aa16.19■□□□□ 0.18
UBE2D3-228ENST00000508974 PTPN21Q16825 1174 aa16.19■□□□□ 0.18
UBE2D3-228ENST00000508974 FOXD4L6Q3SYB3 417 aaPredicted RBP16.19■□□□□ 0.18
UBE2D3-228ENST00000508974 ALKAL1Q6UXT8 129 aa16.19■□□□□ 0.18
UBE2D3-228ENST00000508974 FOXD4L3Q6VB84 417 aaPredicted RBP16.19■□□□□ 0.18
UBE2D3-228ENST00000508974 HSCBQ8IWL3 235 aa16.19■□□□□ 0.18
UBE2D3-228ENST00000508974 PANK2Q9BZ23 570 aa16.19■□□□□ 0.18
UBE2D3-228ENST00000508974 CCSER1Q9C0I3 900 aa16.19■□□□□ 0.18
UBE2D3-228ENST00000508974 PARVGQ9HBI0 331 aa16.19■□□□□ 0.18
UBE2D3-228ENST00000508974 FNIP2Q9P278 1114 aa16.19■□□□□ 0.18
UBE2D3-228ENST00000508974 CCDC39Q9UFE4 941 aa16.19■□□□□ 0.18
UBE2D3-228ENST00000508974 KCNG1Q9UIX4 513 aa16.19■□□□□ 0.18
UBE2D3-228ENST00000508974 TECTAO75443 2155 aa16.19■□□□□ 0.18
UBE2D3-228ENST00000508974 H0YCG3 227 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 PODXLO00592 558 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 ADAM12O43184 909 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 TRAK2O60296 914 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 ASGR2P07307 311 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 CXCL8P10145 99 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 TKTP29401 623 aaKnown RBP16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 TXLNAP40222 546 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 TNFSF9P41273 254 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 CREMQ03060 361 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 UPP1Q16831 310 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 ELMSAN1Q6PJG2 1045 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 DCLRE1AQ6PJP8 1040 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 ZPBP2Q6X784 338 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 TRIM67Q6ZTA4 783 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 CCDC149Q6ZUS6 474 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 LNX1Q8TBB1 728 aaPredicted RBP16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 PIK3R5Q8WYR1 880 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 SMG7Q92540 1137 aaKnown RBP16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 UROC1Q96N76 676 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 CLSTN3Q9BQT9 956 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 SMOC2Q9H3U7 446 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 TFIP11Q9UBB9 837 aaKnown RBP16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 LIMD1Q9UGP4 676 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 TBX20Q9UMR3 447 aa16.18■□□□□ 0.18
UBE2D3-228ENST00000508974 ANK1P16157 1881 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 TMEM221A6NGB7 291 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 M0R296 226 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 BRD1O95696 1058 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 DDIT3P35638 169 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 ZNF131P52739 623 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 MCL1Q07820 350 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 ELAVL2Q12926 359 aaKnown RBP16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 STK38Q15208 465 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 SLC10A6Q3KNW5 377 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 ZC2HC1CQ53FD0 456 aaPredicted RBP16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 XKR4Q5GH76 650 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 ZBTB41Q5SVQ8 909 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 RRAGBQ5VZM2 374 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 CD300LGQ6UXG3 332 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 C15orf39Q6ZRI6 1047 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 KREMEN2Q8NCW0 462 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 SNX21Q969T3 373 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 ZSCAN16Q9H4T2 348 aaPredicted RBP16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 PIDD1Q9HB75 910 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 SLC38A7Q9NVC3 462 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 CNTN3Q9P232 1028 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 TUBGCP4Q9UGJ1 667 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 DPP7Q9UHL4 492 aa16.17■□□□□ 0.18
UBE2D3-228ENST00000508974 TMEM189-UBE2V1I3L0A0 370 aa16.16■□□□□ 0.18
UBE2D3-228ENST00000508974 OR1D2P34982 312 aa16.16■□□□□ 0.18
UBE2D3-228ENST00000508974 SLC39A14Q15043 492 aa16.16■□□□□ 0.18
UBE2D3-228ENST00000508974 LILRA6Q6PI73 481 aa16.16■□□□□ 0.18
UBE2D3-228ENST00000508974 SFR1Q86XK3 245 aa16.16■□□□□ 0.18
UBE2D3-228ENST00000508974 PDILTQ8N807 584 aa16.16■□□□□ 0.18
UBE2D3-228ENST00000508974 KRI1Q8N9T8 703 aaKnown RBP16.16■□□□□ 0.18
UBE2D3-228ENST00000508974 ZNF707Q96C28 371 aaPredicted RBP16.16■□□□□ 0.18
UBE2D3-228ENST00000508974 FAM212AQ96EL1 285 aa16.16■□□□□ 0.18
UBE2D3-228ENST00000508974 IKZF4Q9H2S9 585 aa16.16■□□□□ 0.18
UBE2D3-228ENST00000508974 TBC1D7Q9P0N9 293 aa16.16■□□□□ 0.18
UBE2D3-228ENST00000508974 STK17AQ9UEE5 414 aa16.16■□□□□ 0.18
UBE2D3-228ENST00000508974 CDY1Q9Y6F8 540 aa16.16■□□□□ 0.18
UBE2D3-228ENST00000508974 DOCK6Q96HP0 2047 aa16.16■□□□□ 0.18
UBE2D3-228ENST00000508974 A0A087X0B3 334 aa16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 MYMKA6NI61 221 aa16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 TISP43B9A030 160 aa16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 TULP1O00294 542 aaPredicted RBP16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 TRAPPC3O43617 180 aa16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 KCNE1P15382 129 aa16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 FGFR3P22607 806 aa16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 GBP2P32456 591 aaPredicted RBP16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 STAT6P42226 847 aa16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 RSPO2Q6UXX9 243 aaPredicted RBP16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 CMASQ8NFW8 434 aaPredicted RBP16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 DDX12PQ92771 950 aa16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 PBXIP1Q96AQ6 731 aa16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 ACSF2Q96CM8 615 aaPredicted RBP16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 KIF12Q96FN5 646 aa16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 DDX27Q96GQ7 796 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms