RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 GGPS1O95749 300 aa15.53■□□□□ 0.08
DDX41-208ENST00000507955 C4BPAP04003 597 aaKnown RBP15.53■□□□□ 0.08
DDX41-208ENST00000507955 RRM1P23921 792 aa15.53■□□□□ 0.08
DDX41-208ENST00000507955 HPDP32754 393 aaPredicted RBP15.53■□□□□ 0.08
DDX41-208ENST00000507955 LSP1P33241 339 aa15.53■□□□□ 0.08
DDX41-208ENST00000507955 CTNNA1P35221 906 aaKnown RBP15.53■□□□□ 0.08
DDX41-208ENST00000507955 DHX9Q08211 1270 aaKnown RBP15.53■□□□□ 0.08
DDX41-208ENST00000507955 CUL1Q13616 776 aa15.53■□□□□ 0.08
DDX41-208ENST00000507955 CAPSQ13938 189 aa15.53■□□□□ 0.08
DDX41-208ENST00000507955 WDR78Q5VTH9 848 aa15.53■□□□□ 0.08
DDX41-208ENST00000507955 C15orf39Q6ZRI6 1047 aa15.53■□□□□ 0.08
DDX41-208ENST00000507955 MICALL1Q8N3F8 863 aa15.53■□□□□ 0.08
DDX41-208ENST00000507955 SPATC1LQ9H0A9 340 aa15.53■□□□□ 0.08
DDX41-208ENST00000507955 SLITRK6Q9H5Y7 841 aa15.53■□□□□ 0.08
DDX41-208ENST00000507955 C1orf112Q9NSG2 853 aa15.53■□□□□ 0.08
DDX41-208ENST00000507955 BCCIPQ9P287 314 aaKnown RBP eCLIP15.53■□□□□ 0.08
DDX41-208ENST00000507955 ATP8A1Q9Y2Q0 1164 aa15.53■□□□□ 0.08
DDX41-208ENST00000507955 BHMG1C9JSJ3 638 aaPredicted RBP15.52■□□□□ 0.08
DDX41-208ENST00000507955 NDUFAB1O14561 156 aa15.52■□□□□ 0.08
DDX41-208ENST00000507955 DKC1O60832 514 aaKnown RBP eCLIP15.52■□□□□ 0.08
DDX41-208ENST00000507955 NR1D1P20393 614 aa15.52■□□□□ 0.08
DDX41-208ENST00000507955 PLTPP55058 493 aa15.52■□□□□ 0.08
DDX41-208ENST00000507955 C11orf63Q6NUN7 778 aa15.52■□□□□ 0.08
DDX41-208ENST00000507955 PRPF31Q8WWY3 499 aaKnown RBP15.52■□□□□ 0.08
DDX41-208ENST00000507955 COPS5Q92905 334 aa15.52■□□□□ 0.08
DDX41-208ENST00000507955 CD101Q93033 1021 aa15.52■□□□□ 0.08
DDX41-208ENST00000507955 TTC7AQ9ULT0 858 aaPredicted RBP15.52■□□□□ 0.08
DDX41-208ENST00000507955 H0YGN5 161 aa15.52■□□□□ 0.07
DDX41-208ENST00000507955 CYP1A2P05177 515 aa15.52■□□□□ 0.07
DDX41-208ENST00000507955 ARL2P36404 184 aa15.52■□□□□ 0.07
DDX41-208ENST00000507955 STAT5BP51692 787 aa15.52■□□□□ 0.07
DDX41-208ENST00000507955 ZACNQ401N2 412 aa15.52■□□□□ 0.07
DDX41-208ENST00000507955 SH3D19Q5HYK7 790 aa15.52■□□□□ 0.07
DDX41-208ENST00000507955 NOL9Q5SY16 702 aaKnown RBP15.52■□□□□ 0.07
DDX41-208ENST00000507955 ACAD10Q6JQN1 1059 aa15.52■□□□□ 0.07
DDX41-208ENST00000507955 TMEM270Q6UE05 265 aa15.52■□□□□ 0.07
DDX41-208ENST00000507955 UBL4BQ8N7F7 174 aa15.52■□□□□ 0.07
DDX41-208ENST00000507955 MAGOHBQ96A72 148 aaKnown RBP15.52■□□□□ 0.07
DDX41-208ENST00000507955 ATP6V1G3Q96LB4 118 aa15.52■□□□□ 0.07
DDX41-208ENST00000507955 ANAPC7Q9UJX3 599 aa15.52■□□□□ 0.07
DDX41-208ENST00000507955 NFS1Q9Y697 457 aa15.52■□□□□ 0.07
DDX41-208ENST00000507955 DCDC2CA8MYV0 355 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 CLDN3O15551 220 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 CST3P01034 146 aaPredicted RBP15.51■□□□□ 0.07
DDX41-208ENST00000507955 SEC24CP53992 1094 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 HADHBP55084 474 aaKnown RBP15.51■□□□□ 0.07
DDX41-208ENST00000507955 RTP1P59025 263 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 OSTNP61366 133 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 CLEC16AQ2KHT3 1053 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 EMC10Q5UCC4 262 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 JAMLQ86YT9 394 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 CHST13Q8NET6 341 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 DNERQ8NFT8 737 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 FAM118BQ9BPY3 351 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 HERPUD2Q9BSE4 406 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 DAAM1Q9Y4D1 1078 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 NUB1Q9Y5A7 615 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 CSDE1O75534 798 aaKnown RBP15.51■□□□□ 0.07
DDX41-208ENST00000507955 SCP2P22307 547 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 SNX1Q13596 522 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 ZNF394Q53GI3 561 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 TMC3Q7Z5M5 1100 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 UHMK1Q8TAS1 419 aaKnown RBP15.51■□□□□ 0.07
DDX41-208ENST00000507955 FBXO25Q8TCJ0 367 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 TCHPQ9BT92 498 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 GTF3C4Q9UKN8 822 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 CSADQ9Y600 493 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 MYPNQ86TC9 1320 aa15.51■□□□□ 0.07
DDX41-208ENST00000507955 STAM2O75886 525 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 RARAP10276 462 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 UNGP13051 313 aaPredicted RBP15.5■□□□□ 0.07
DDX41-208ENST00000507955 ICAM3P32942 547 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 MCCD1P59942 119 aaPredicted RBP15.5■□□□□ 0.07
DDX41-208ENST00000507955 IRX3P78415 501 aaPredicted RBP15.5■□□□□ 0.07
DDX41-208ENST00000507955 GCNT1Q02742 428 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 ZNF844Q08AG5 666 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 PSMD6Q15008 389 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 WDR44Q5JSH3 913 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 C1orf54Q8WWF1 131 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 PPP1R16BQ96T49 567 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 ERP44Q9BS26 406 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 ASCC2Q9H1I8 757 aaPredicted RBP15.5■□□□□ 0.07
DDX41-208ENST00000507955 TMBIM4Q9HC24 238 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 BRCA2P51587 3418 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 MYO1FO00160 1098 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 NAMPTP43490 491 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 DUPD1Q68J44 220 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 CCDC137Q6PK04 289 aaKnown RBP15.5■□□□□ 0.07
DDX41-208ENST00000507955 USP37Q86T82 979 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 RIOX2Q8IUF8 465 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 ATG4AQ8WYN0 398 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 C11orf70Q9BRQ4 267 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 EFCC1Q9HA90 598 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 PCDHB4Q9Y5E5 795 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 MROH7Q68CQ1 1323 aa15.5■□□□□ 0.07
DDX41-208ENST00000507955 WDR90Q96KV7 1748 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 IGKV6D-21A0A0A0MT36 114 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 GOLGA6L10A0A0M3HER8 536 aa15.49■□□□□ 0.07
DDX41-208ENST00000507955 ACO1P21399 889 aaKnown RBP15.49■□□□□ 0.07
DDX41-208ENST00000507955 MAPK4P31152 587 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms