RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, human

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42SE2-210	ENST00000506929	PTH1R	Q03431	593 aa		4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	LSM12	Q3MHD2	195 aa	Known RBP	4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	DCAF17	Q5H9S7	520 aa	Predicted RBP	4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	SSH1	Q8WYL5	1049 aa		4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	HDAC10	Q969S8	669 aa		4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ZSWIM1	Q9BR11	485 aa		4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	GSTO2	Q9H4Y5	243 aa		4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	TDP1	Q9NUW8	608 aa		4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	TMEM140	Q9NV12	185 aa		4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	TRPM5	Q9NZQ8	1165 aa		4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	EIF2B4	Q9UI10	523 aa	Known RBP	4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	NOB1	Q9ULX3	412 aa	Known RBP	4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	CHST2	Q9Y4C5	530 aa		4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	USP15	Q9Y4E8	981 aa	Predicted RBP	4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	SPEF1	Q9Y4P9	236 aa		4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	HS3ST3A1	Q9Y663	406 aa		4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	GOLGA6L6	A8MZA4	724 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	KIAA0391	O15091	583 aa	Known RBP	4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	NCR1	O76036	304 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ELANE	P08246	267 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	POU2F2	P09086	479 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	IL2RB	P14784	551 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ZSCAN20	P17040	1043 aa	Predicted RBP	4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	SLC16A1	P53985	500 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	CDC42EP1	Q00587	391 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	SNAPC2	Q13487	334 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	PIN1	Q13526	163 aa	Predicted RBP	4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	UBXN2B	Q14CS0	331 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	KHDC1	Q4VXA5	237 aa	Known RBP	4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	TMEM240	Q5SV17	173 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ODR4	Q5SWX8	454 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	OTUD7B	Q6GQQ9	843 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	FAM180A	Q6UWF9	173 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	MIGA2	Q7L4E1	593 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	RSPH3	Q86UC2	560 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	COL23A1	Q86Y22	540 aa	Predicted RBP	4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	PLXDC1	Q8IUK5	500 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ZFPM1	Q8IX07	1006 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	MIER2	Q8N344	545 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	PRR18	Q8N4B5	295 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	NSUN6	Q8TEA1	469 aa	Known RBP	4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	JPH3	Q8WXH2	748 aa	Predicted RBP	4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	LRGUK	Q96M69	825 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	SORCS2	Q96PQ0	1159 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	MANSC1	Q9H8J5	431 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	MMRN2	Q9H8L6	949 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ZIM2	Q9NZV7	527 aa		4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ING1	Q9UK53	422 aa	Predicted RBP	4.56	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	GRM6	O15303	877 aa		4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	PJA2	O43164	708 aa		4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	SNRPA1	P09661	255 aa	Known RBP	4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	CTXN1	P60606	82 aa		4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	NOMO3	P69849	1222 aa		4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	TLE1	Q04724	770 aa		4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	NOMO2	Q5JPE7	1267 aa		4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	RRP12	Q5JTH9	1297 aa	Known RBP	4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	TSHZ3	Q63HK5	1081 aa		4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	LRRC55	Q6ZSA7	311 aa		4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	SEM1	Q6ZVN7	128 aa		4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	CASKIN2	Q8WXE0	1202 aa		4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	MLST8	Q9BVC4	326 aa		4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ANLN	Q9NQW6	1124 aa		4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	MRPS18A	Q9NVS2	196 aa	Known RBP	4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	MOCS1	Q9NZB8	636 aa		4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	USP25	Q9UHP3	1055 aa		4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	SAP30BP	Q9UHR5	308 aa	Known RBP	4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ZNF180	Q9UJW8	692 aa		4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	PCDHA3	Q9Y5H8	950 aa		4.55	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	CDHR4	A6H8M9	788 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ZNF202	O95125	648 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ZFPL1	O95159	310 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	POMC	P01189	267 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	PHKA1	P46020	1223 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	SLFN5	Q08AF3	891 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	TUBA3C	Q13748	450 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	METTL24	Q5JXM2	366 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	KRTAP5-3	Q6L8H2	238 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	TUBA3E	Q6PEY2	450 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	USP45	Q70EL2	814 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ZNF627	Q7L945	461 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	GDF7	Q7Z4P5	450 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	DRC7	Q8IY82	874 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ZNF276	Q8N554	614 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	CELF5	Q8N6W0	485 aa	Known RBP	4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ZFP28	Q8NHY6	868 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	CLIP3	Q96DZ5	547 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	CYFIP2	Q96F07	1278 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	MARS2	Q96GW9	593 aa	Known RBP	4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	CEP89	Q96ST8	783 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	C1orf43	Q9BWL3	253 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	TLR10	Q9BXR5	811 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	C11orf54	Q9H0W9	315 aa	Predicted RBP	4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	SLC12A5	Q9H2X9	1139 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	NRDE2	Q9H7Z3	1164 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	TCF7L1	Q9HCS4	588 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	KLHL11	Q9NVR0	708 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	PARPBP	Q9NWS1	579 aa		4.54	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ANKFY1	Q9P2R3	1169 aa		4.54	□□□□□ -1.68

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