RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 KIZQ2M2Z5 673 aa10.56□□□□□ -0.72
CLCN3-205ENST00000506924 SPRED3Q2MJR0 410 aa10.56□□□□□ -0.72
CLCN3-205ENST00000506924 XKR9Q5GH70 373 aa10.56□□□□□ -0.72
CLCN3-205ENST00000506924 CATSPER3Q86XQ3 398 aa10.56□□□□□ -0.72
CLCN3-205ENST00000506924 C4orf19Q8IY42 314 aa10.56□□□□□ -0.72
CLCN3-205ENST00000506924 DBF4BQ8NFT6 615 aa10.56□□□□□ -0.72
CLCN3-205ENST00000506924 HERVK_113Q902F9 699 aa10.56□□□□□ -0.72
CLCN3-205ENST00000506924 CEP89Q96ST8 783 aa10.56□□□□□ -0.72
CLCN3-205ENST00000506924 CYP26B1Q9NR63 512 aa10.56□□□□□ -0.72
CLCN3-205ENST00000506924 LRWD1Q9UFC0 647 aa10.56□□□□□ -0.72
CLCN3-205ENST00000506924 TRPV2Q9Y5S1 764 aa10.56□□□□□ -0.72
CLCN3-205ENST00000506924 LOXHD1Q8IVV2 1947 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 A0A1W2PPC1 479 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 M0QZ92 97 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 MAGEB2O15479 319 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 DKC1O60832 514 aaKnown RBP eCLIP10.55□□□□□ -0.72
CLCN3-205ENST00000506924 CAND2O75155 1236 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 B3GALT4O96024 378 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 CXCL10P02778 98 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 ESRRAP11474 423 aaPredicted RBP10.55□□□□□ -0.72
CLCN3-205ENST00000506924 ACTN1P12814 892 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 IBSPP21815 317 aaPredicted RBP10.55□□□□□ -0.72
CLCN3-205ENST00000506924 CD52P31358 61 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 CCT6AP40227 531 aaKnown RBP10.55□□□□□ -0.72
CLCN3-205ENST00000506924 ARL4DP49703 201 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 FXR1P51114 621 aaKnown RBP eCLIP10.55□□□□□ -0.72
CLCN3-205ENST00000506924 RABGGTBP53611 331 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 GRIN1Q05586 938 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 PCDH1Q08174 1060 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 MRPL58Q14197 206 aaKnown RBP10.55□□□□□ -0.72
CLCN3-205ENST00000506924 LPIN1Q14693 890 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 SETDB1Q15047 1291 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 MAEAQ7L5Y9 396 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 RPAINQ86UA6 219 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 ERMNQ8TAM6 284 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 TMEM143Q96AN5 459 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 PLIN2Q99541 437 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 CELF4Q9BZC1 486 aaKnown RBP10.55□□□□□ -0.72
CLCN3-205ENST00000506924 AGO3Q9H9G7 860 aaKnown RBP10.55□□□□□ -0.72
CLCN3-205ENST00000506924 SLC4A7Q9Y6M7 1214 aa10.55□□□□□ -0.72
CLCN3-205ENST00000506924 LAD1O00515 517 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 FSCN2O14926 492 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 CSDE1O75534 798 aaKnown RBP10.54□□□□□ -0.72
CLCN3-205ENST00000506924 PFKMP08237 780 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 USP17L7P0C7H9 530 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 TMOD1P28289 359 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 MARCKSP29966 332 aaPredicted RBP10.54□□□□□ -0.72
CLCN3-205ENST00000506924 POLGP54098 1239 aaPredicted RBP10.54□□□□□ -0.72
CLCN3-205ENST00000506924 NLRP11P59045 1033 aaKnown RBP10.54□□□□□ -0.72
CLCN3-205ENST00000506924 DEFB103AP81534 67 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 LRIT3Q3SXY7 679 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 PLEKHG4Q58EX7 1191 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 FBXO47Q5MNV8 452 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 RASIP1Q5U651 963 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 CNKSR3Q6P9H4 555 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.54□□□□□ -0.72
CLCN3-205ENST00000506924 OTUD6AQ7L8S5 288 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 KSR1Q8IVT5 923 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 NME8Q8N427 588 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 LINC01465Q8N7H1 131 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 IGSF22Q8N9C0 903 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 NEK9Q8TD19 979 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 TMEM40Q8WWA1 233 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 SEPT8Q92599 483 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 CRELD1Q96HD1 420 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 CCDC43Q96MW1 224 aaKnown RBP10.54□□□□□ -0.72
CLCN3-205ENST00000506924 SCLT1Q96NL6 688 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 MAP7D2Q96T17 732 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 POLR3CQ9BUI4 534 aaPredicted RBP10.54□□□□□ -0.72
CLCN3-205ENST00000506924 IFIH1Q9BYX4 1025 aaKnown RBP10.54□□□□□ -0.72
CLCN3-205ENST00000506924 POLD4Q9HCU8 107 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 TUFT1Q9NNX1 390 aa10.54□□□□□ -0.72
CLCN3-205ENST00000506924 SUCLA2Q9P2R7 463 aaPredicted RBP10.54□□□□□ -0.72
CLCN3-205ENST00000506924 LINC01387J3KSC0 135 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 USO1O60763 962 aaKnown RBP10.53□□□□□ -0.72
CLCN3-205ENST00000506924 GPR32O75388 356 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 MAFO75444 373 aaPredicted RBP10.53□□□□□ -0.72
CLCN3-205ENST00000506924 LYPLA2O95372 231 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 PARNO95453 639 aaKnown RBP10.53□□□□□ -0.72
CLCN3-205ENST00000506924 ZSCAN22P10073 491 aaPredicted RBP10.53□□□□□ -0.72
CLCN3-205ENST00000506924 MYOGP15173 224 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 ATP2A2P16615 1042 aaKnown RBP10.53□□□□□ -0.72
CLCN3-205ENST00000506924 FGFR4P22455 802 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 RPA1P27694 616 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 PRPHP41219 470 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 KCNJ6P48051 423 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 RARRES1P49788 294 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 WDR5P61964 334 aaKnown RBP10.53□□□□□ -0.72
CLCN3-205ENST00000506924 KCNMA1Q12791 1236 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 BECN1Q14457 450 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 PDIA5Q14554 519 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 EMC2Q15006 297 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 PTPAQ15257 358 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 SPECC1Q5M775 1068 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 KRT79Q5XKE5 535 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 Q7L0L9 218 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 RHPN2Q8IUC4 686 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 SLC7A3Q8WY07 619 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 CHAMP1Q96JM3 812 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 NLRP4Q96MN2 994 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms