RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 SCP2P22307 547 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 ABCD1P33897 745 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 BTG3Q14201 252 aaPredicted RBP9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 ARSIQ5FYB1 569 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 GLB1LQ6UWU2 654 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 ALKAL1Q6UXT8 129 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 IRF2BP1Q8IU81 584 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 C12orf56Q8IXR9 622 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 ABI1Q8IZP0 508 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 CSGALNACT2Q8N6G5 542 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 AOPEPQ8N6M6 819 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 OR5B17Q8NGF7 314 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 ZNF689Q96CS4 500 aaPredicted RBP9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 FBXL18Q96ME1 805 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 PBX4Q9BYU1 374 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 MTIF3Q9H2K0 278 aaKnown RBP9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 NKX2-4Q9H2Z4 354 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 ELAC1Q9H777 363 aaKnown RBP9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 TBC1D13Q9NVG8 400 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 TUBGCP4Q9UGJ1 667 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 RWDD2AQ9UIY3 292 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 GIT1Q9Y2X7 761 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 MRPL42Q9Y6G3 142 aaKnown RBP9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 SOX1O00570 391 aaPredicted RBP9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 PPEF2O14830 753 aa9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 CETN3O15182 167 aa9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 LRRN2O75325 713 aa9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 CA3P07451 260 aa9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 SKIP12755 728 aa9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 YARSP54577 528 aaKnown RBP9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 TFAMQ00059 246 aaKnown RBP9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 FKBP3Q00688 224 aaKnown RBP9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 RNASELQ05823 741 aaKnown RBP9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 CYP24A1Q07973 514 aa9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 VARS2Q5ST30 1063 aaKnown RBP9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 C1orf220Q5T0J3 134 aa9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 SPOUT1Q5T280 376 aaKnown RBP9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 SLC9A9Q8IVB4 645 aa9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 BRSK2Q8IWQ3 736 aa9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 FAM186BQ8IYM0 893 aa9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 RNF214Q8ND24 703 aa9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 GOLGA5Q8TBA6 731 aa9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 ZNF516Q92618 1163 aa9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 BORCS6Q96GS4 357 aa9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 SLC9A7Q96T83 725 aa9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 RAD9AQ99638 391 aa9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 TMEM117Q9H0C3 514 aa9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 NRDE2Q9H7Z3 1164 aa9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 RC3H2Q9HBD1 1191 aaKnown RBP9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 FANCLQ9NW38 375 aa9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 PRG3Q9Y2Y8 225 aaPredicted RBP9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 COL4A6Q14031 1691 aa9.59□□□□□ -0.87
SCAMP1-202ENST00000506858 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 RFXAPO00287 272 aa9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 ZC3H11AO75152 810 aaKnown RBP eCLIP9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 LETM1O95202 739 aaPredicted RBP9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 RPL13P26373 211 aaKnown RBP9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 HTRA4P83105 476 aaPredicted RBP9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 LRRC63Q05C16 580 aa9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 NCAPHQ15003 741 aa9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 NAB2Q15742 525 aa9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 TPD52L1Q16890 204 aaPredicted RBP9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 EDRF1Q3B7T1 1238 aa9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 PRPF38BQ5VTL8 546 aaKnown RBP9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 APBB1IPQ7Z5R6 666 aaPredicted RBP9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 LUZP1Q86V48 1076 aa9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 TMEM173Q86WV6 379 aaPredicted RBP9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 DHX40Q8IX18 779 aaKnown RBP9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 ZC3H3Q8IXZ2 948 aaKnown RBP9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 PLPP6Q8IY26 295 aa9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 HACE1Q8IYU2 909 aa9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 PHOSPHO2Q8TCD6 241 aa9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 HASPINQ8TF76 798 aa9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 LRCH3Q96II8 777 aa9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 MFSD14AQ96MC6 490 aa9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 RPS6KC1Q96S38 1066 aa9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 C17orf80Q9BSJ5 609 aa9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 CWH43Q9H720 699 aa9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 CBX8Q9HC52 389 aa9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 FRMD4BQ9Y2L6 1034 aa9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 NFE2L3Q9Y4A8 694 aa9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 INSL6Q9Y581 213 aa9.58□□□□□ -0.88
SCAMP1-202ENST00000506858 BICDL2A1A5D9 508 aa9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 LRRIQ3A6PVS8 624 aaPredicted RBP9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 I3L4J1 428 aa9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 LDHAP00338 332 aaKnown RBP9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 ITGB1P05556 798 aa9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 THP07101 528 aa9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 ERCC5P28715 1186 aaPredicted RBP9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 PSMC2P35998 433 aaKnown RBP9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 SLC11A1P49279 550 aa9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 ZNF165P49910 485 aa9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 SNRPFP62306 86 aaKnown RBP9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 PPP2R3AQ06190 1150 aa9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 PPP3CAQ08209 521 aa9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 PTPN21Q16825 1174 aa9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 CCDC40Q4G0X9 1142 aa9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 XKR4Q5GH76 650 aa9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 DCAF17Q5H9S7 520 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms