RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 IGDCC3Q8IVU1 814 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 MSL3Q8N5Y2 521 aaKnown RBP3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 PNISRQ8TF01 805 aaKnown RBP3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 BRI3BPQ8WY22 251 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 GCDHQ92947 438 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 PRG4Q92954 1404 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 LIN37Q96GY3 246 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 ZC3H10Q96K80 434 aaKnown RBP3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 DIRC2Q96SL1 478 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 NAP1L4Q99733 375 aaKnown RBP3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 MCOLN1Q9GZU1 580 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 LDAHQ9H6V9 325 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 L2HGDHQ9H9P8 463 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 CERS4Q9HA82 394 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 PNPLA8Q9NP80 782 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 PIH1D1Q9NWS0 290 aaKnown RBP3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 TRPS1Q9UHF7 1281 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 PCDHA6Q9UN73 950 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 PCDHA1Q9Y5I3 950 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 MORC2Q9Y6X9 1032 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 TOP2BQ02880 1626 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 USP19O94966 1318 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 RUSC2Q8N2Y8 1516 aa3.9□□□□□ -1.78
TRAPPC11-205ENST00000506426 hCG_1642624A0A1W2PR95 340 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 ZNF503-AS2A6NEH8 195 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 POM121BA6NF01 834 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 HMGB1P1B2RPK0 211 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 TEX33O43247 280 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 PIP5K1CO60331 668 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 SEMA7AO75326 666 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 PPFIA4O75335 1185 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 ITGA10O75578 1167 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 KLHL18O94889 574 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 IL18RAPO95256 599 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 ABCB4P21439 1286 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 PRDX5P30044 214 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 PTPN7P35236 360 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 MRE11P49959 708 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 SUMO3P55854 103 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 CTXN1P60606 82 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 ATP8B2P98198 1209 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 DUSP2Q05923 314 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 ADAM15Q13444 863 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 DAG1Q14118 895 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 PCOLCEQ15113 449 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 RALBP1Q15311 655 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 ATP2B3Q16720 1220 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 PRR16Q569H4 304 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 PDZD4Q76G19 769 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 ZGPATQ8N5A5 531 aaKnown RBP3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 CCDC33Q8N5R6 958 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 CASKIN2Q8WXE0 1202 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 STON2Q8WXE9 905 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 ZCCHC14Q8WYQ9 949 aaKnown RBP3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 CCT6BQ92526 530 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 FAM168AQ92567 244 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 CARD11Q9BXL7 1154 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 NSUN3Q9H649 340 aaKnown RBP3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 GNL3LQ9NVN8 582 aaKnown RBP3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 SPATA6Q9NWH7 488 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 ING3Q9NXR8 418 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 FAM53CQ9NYF3 392 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 GPRC5BQ9NZH0 403 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 LUZP4Q9P127 313 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 AJAP1Q9UKB5 411 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 FAM184BQ9ULE4 1060 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 RBM8AQ9Y5S9 174 aaKnown RBP3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 PMF1-BGLAPU3KQ54 211 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 SHROOM2Q13796 1616 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 BIVM-ERCC5R4GMW8 1640 aa3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 TTBK1Q5TCY1 1321 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC11-205ENST00000506426 C2orf78A6NCI8 922 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 LRRC10BA6NIK2 292 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 NT5C1B-RDH14C9J2C7 533 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 ADCY6O43306 1168 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 MTSS1O43312 755 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 NCK2O43639 380 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 WDHD1O75717 1129 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 FGF18O76093 207 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 FARP2O94887 1054 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 PARP1P09874 1014 aaKnown RBP3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 NPR1P16066 1061 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 EN2P19622 333 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 RPL13P26373 211 aaKnown RBP3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 GUCY1A2P33402 732 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 IL6STP40189 918 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 TECP42680 631 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 LIMS1P48059 325 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 MAPK10P53779 464 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 EPHB3P54753 998 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 POU5F1BQ06416 359 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 MTM1Q13496 603 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 PRR31Q5SQ13 230 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 DACT2Q5SW24 774 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 CIAPIN1Q6FI81 312 aa3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 HIBCHQ6NVY1 386 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC11-205ENST00000506426 PGBD2Q6P3X8 592 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms